EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAOCG00000012309 (Gene tree)
Gene ID: 111566526
Gene Symbol: ern1
Alias: sb:eu1005|zgc:109932
Full Name: endoplasmic reticulum to nucleus signaling 1
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Minus strand
Length: 26406 bases
Position: chrNXFZ01002005.1:36127-62532
Accession: 111566526
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000024980	Ribonuc_2-5A	PF06479.12	5e-40	1	1
ENSAOCP00000008242	Ribonuc_2-5A	PF06479.12	5.1e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000001433	-	3252	-	ENSAOCP00000008242	1083 (aa)	-	-
ENSAOCT00000001385	-	4134	XM_023267154	ENSAOCP00000024980	1081 (aa)	XP_023122922	UPI000C3092D8

Gene Model

Click here to download ENSAOCG00000012309's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000012309's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAOCG00000012309	ern1	86	57.188	ENSAOCG00000001933	ern2	98	56.148

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000012309	ern1	100	97.040	ENSAPOG00000009999	ern1	100	97.040	Acanthochromis_polyacanthus
ENSAOCG00000012309	ern1	99	90.349	ENSACIG00000021716	ern1	99	90.349	Amphilophus_citrinellus
ENSAOCG00000012309	ern1	100	99.352	ENSAPEG00000011263	ern1	100	99.352	Amphiprion_percula
ENSAOCG00000012309	ern1	100	88.440	ENSATEG00000024468	ern1	99	88.440	Anabas_testudineus
ENSAOCG00000012309	ern1	99	91.060	ENSACLG00000027919	ern1	99	91.060	Astatotilapia_calliptera
ENSAOCG00000012309	ern1	97	79.434	ENSAMXG00000000944	ern1	99	79.434	Astyanax_mexicanus
ENSAOCG00000012309	ern1	94	88.900	ENSCSEG00000014500	ern1	99	89.293	Cynoglossus_semilaevis
ENSAOCG00000012309	ern1	99	85.847	ENSCVAG00000002988	ern1	97	89.557	Cyprinodon_variegatus
ENSAOCG00000012309	ern1	90	81.996	ENSDARG00000013997	ern1	100	82.213	Danio_rerio
ENSAOCG00000012309	ern1	96	78.343	ENSELUG00000005957	ern1	100	78.363	Esox_lucius
ENSAOCG00000012309	ern1	99	85.568	ENSFHEG00000005578	ern1	99	85.568	Fundulus_heteroclitus
ENSAOCG00000012309	ern1	87	86.809	ENSGMOG00000011232	ern1	100	86.809	Gadus_morhua
ENSAOCG00000012309	ern1	94	89.774	ENSGAFG00000020231	ern1	95	89.774	Gambusia_affinis
ENSAOCG00000012309	ern1	88	91.118	ENSGACG00000011700	ern1	99	91.118	Gasterosteus_aculeatus
ENSAOCG00000012309	ern1	99	89.981	ENSHBUG00000012581	ern1	99	90.750	Haplochromis_burtoni
ENSAOCG00000012309	ern1	98	85.499	ENSHCOG00000016199	ern1	98	85.499	Hippocampus_comes
ENSAOCG00000012309	ern1	97	78.725	ENSIPUG00000011083	ern1	99	78.819	Ictalurus_punctatus
ENSAOCG00000012309	ern1	98	86.916	ENSKMAG00000019499	ern1	98	87.103	Kryptolebias_marmoratus
ENSAOCG00000012309	ern1	97	86.330	ENSLBEG00000025907	ern1	99	86.330	Labrus_bergylta
ENSAOCG00000012309	ern1	99	88.472	ENSMAMG00000023439	ern1	99	88.754	Mastacembelus_armatus
ENSAOCG00000012309	ern1	99	91.060	ENSMZEG00005003221	ern1	99	91.060	Maylandia_zebra
ENSAOCG00000012309	ern1	91	90.974	ENSMMOG00000007650	ern1	98	90.974	Mola_mola
ENSAOCG00000012309	ern1	100	86.893	ENSMALG00000017775	ern1	98	86.893	Monopterus_albus
ENSAOCG00000012309	ern1	99	89.610	ENSNBRG00000002179	ern1	98	90.840	Neolamprologus_brichardi
ENSAOCG00000012309	ern1	89	92.805	ENSONIG00000017169	ern1	99	93.006	Oreochromis_niloticus
ENSAOCG00000012309	ern1	98	85.874	ENSORLG00000008940	ern1	99	85.874	Oryzias_latipes
ENSAOCG00000012309	ern1	98	86.127	ENSORLG00020018387	ern1	99	86.127	Oryzias_latipes_hni
ENSAOCG00000012309	ern1	98	85.940	ENSORLG00015007946	ern1	99	85.940	Oryzias_latipes_hsok
ENSAOCG00000012309	ern1	98	86.803	ENSOMEG00000011741	ern1	99	86.803	Oryzias_melastigma
ENSAOCG00000012309	ern1	90	82.051	ENSPKIG00000005593	ern1	98	82.389	Paramormyrops_kingsleyae
ENSAOCG00000012309	ern1	97	85.782	ENSPMGG00000020442	ern1	99	85.865	Periophthalmus_magnuspinnatus
ENSAOCG00000012309	ern1	93	90.774	ENSPFOG00000007378	ern1	94	90.774	Poecilia_formosa
ENSAOCG00000012309	ern1	93	90.774	ENSPLAG00000014780	ern1	94	90.774	Poecilia_latipinna
ENSAOCG00000012309	ern1	93	90.873	ENSPMEG00000016324	ern1	94	90.873	Poecilia_mexicana
ENSAOCG00000012309	ern1	96	88.365	ENSPREG00000006286	ern1	97	88.365	Poecilia_reticulata
ENSAOCG00000012309	ern1	99	91.336	ENSPNYG00000017929	ern1	99	93.444	Pundamilia_nyererei
ENSAOCG00000012309	ern1	97	79.867	ENSPNAG00000029447	ern1	99	80.152	Pygocentrus_nattereri
ENSAOCG00000012309	ern1	99	88.582	ENSSMAG00000015042	ern1	99	88.582	Scophthalmus_maximus
ENSAOCG00000012309	ern1	100	90.585	ENSSDUG00000009098	ern1	99	90.585	Seriola_dumerili
ENSAOCG00000012309	ern1	100	90.311	ENSSLDG00000023254	ern1	99	90.311	Seriola_lalandi_dorsalis
ENSAOCG00000012309	ern1	100	94.177	ENSSPAG00000017539	ern1	99	94.602	Stegastes_partitus
ENSAOCG00000012309	ern1	93	86.858	ENSTRUG00000001041	ern1	97	86.858	Takifugu_rubripes
ENSAOCG00000012309	ern1	87	91.365	ENSTNIG00000017990	ern1	98	91.392	Tetraodon_nigroviridis
ENSAOCG00000012309	ern1	91	91.548	ENSXCOG00000010330	ern1	97	91.548	Xiphophorus_couchianus
ENSAOCG00000012309	ern1	93	90.377	ENSXMAG00000001310	ern1	94	90.377	Xiphophorus_maculatus