EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSAOCG00000012358 (Gene tree)
Gene ID
111562889
Gene Symbol
rbfox3b
Alias
rbfox3l|si:ch73-322f21.1
Full Name
RNA binding protein fox-1 homolog 3-like
Gene Type
protein_coding
Species
Amphiprion_ocellaris
Status
putative
Strand
Plus strand
Length
194422 bases
Position
chrNXFZ01006196.1:400228-594649
Accession
111562889
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSAOCP00000025055Fox-1_CPF12414.84.9e-4311
ENSAOCP00000008372Fox-1_CPF12414.88.2e-4311
ENSAOCP00000025055RRM_1PF00076.221.5e-1811
ENSAOCP00000008372RRM_1PF00076.221.5e-1811
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSAOCT00000001215-1350XM_023261670ENSAOCP00000008372365 (aa)XP_023117438-
ENSAOCT00000001204-1104XM_023261665ENSAOCP00000025055367 (aa)XP_023117433UPI000B8FE5EF
Gene Model
Click here to download ENSAOCG00000012358's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000012358's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSAOCG00000012358rbfox3b7057.483ENSAOCG00000015358-8754.301
ENSAOCG00000012358rbfox3b7365.141ENSAOCG00000008283rbfox19764.437
ENSAOCG00000012358rbfox3b5967.490ENSAOCG00000013752rbfox28250.868
ENSAOCG00000012358rbfox3b7857.191ENSAOCG00000020938rbfox1l9655.692
ENSAOCG00000012358rbfox3b10079.837ENSAOCG00000010786-9780.654
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSAOCG00000012358rbfox3b8180.000ENSG00000167281RBFOX310082.803Homo_sapiens
ENSAOCG00000012358rbfox3b10070.109ENSAPOG00000015658-9170.380Acanthochromis_polyacanthus
ENSAOCG00000012358rbfox3b100100.000ENSAPOG00000021630rbfox3b100100.000Acanthochromis_polyacanthus
ENSAOCG00000012358rbfox3b8976.232ENSAMEG00000014170RBFOX38877.810Ailuropoda_melanoleuca
ENSAOCG00000012358rbfox3b8595.192ENSACIG00000010817rbfox3b9995.192Amphilophus_citrinellus
ENSAOCG00000012358rbfox3b8470.859ENSACIG00000003768-9071.166Amphilophus_citrinellus
ENSAOCG00000012358rbfox3b10090.959ENSAPEG00000019081rbfox3b9990.959Amphiprion_percula
ENSAOCG00000012358rbfox3b9273.611ENSAPEG00000015891-8974.444Amphiprion_percula
ENSAOCG00000012358rbfox3b8589.474ENSATEG00000019945rbfox3b9989.474Anabas_testudineus
ENSAOCG00000012358rbfox3b8179.000ENSATEG00000023101-9679.365Anabas_testudineus
ENSAOCG00000012358rbfox3b9880.501ENSACAG00000016093RBFOX39981.564Anolis_carolinensis
ENSAOCG00000012358rbfox3b8179.667ENSANAG00000023457RBFOX310082.484Aotus_nancymaae
ENSAOCG00000012358rbfox3b10098.913ENSACLG00000020011rbfox3b10098.722Astatotilapia_calliptera
ENSAOCG00000012358rbfox3b10081.744ENSACLG00000025552-10082.561Astatotilapia_calliptera
ENSAOCG00000012358rbfox3b9787.006ENSAMXG00000042841rbfox3b10086.441Astyanax_mexicanus
ENSAOCG00000012358rbfox3b10083.554ENSAMXG00000037246rbfox3a10085.215Astyanax_mexicanus
ENSAOCG00000012358rbfox3b6981.961ENSBTAG00000006280RBFOX310063.712Bos_taurus
ENSAOCG00000012358rbfox3b8174.916ENSCJAG00000009563RBFOX310072.022Callithrix_jacchus
ENSAOCG00000012358rbfox3b6584.583ENSCAFG00000005547RBFOX38587.448Canis_familiaris
ENSAOCG00000012358rbfox3b8168.208ENSCAFG00020008126RBFOX39671.745Canis_lupus_dingo
ENSAOCG00000012358rbfox3b8168.012ENSCHIG00000009124RBFOX39671.745Capra_hircus
ENSAOCG00000012358rbfox3b8168.588ENSTSYG00000029617RBFOX310072.376Carlito_syrichta
ENSAOCG00000012358rbfox3b8169.429ENSCPOG00000021703RBFOX310071.154Cavia_porcellus
ENSAOCG00000012358rbfox3b8179.667ENSCCAG00000028450RBFOX310082.484Cebus_capucinus
ENSAOCG00000012358rbfox3b8180.000ENSCATG00000018349RBFOX310082.803Cercocebus_atys
ENSAOCG00000012358rbfox3b8169.828ENSCLAG00000006449RBFOX310071.547Chinchilla_lanigera
ENSAOCG00000012358rbfox3b8180.000ENSCSAG00000002355RBFOX310082.803Chlorocebus_sabaeus
ENSAOCG00000012358rbfox3b8883.951ENSCPBG00000010904RBFOX310083.706Chrysemys_picta_bellii
ENSAOCG00000012358rbfox3b8180.000ENSCANG00000043120RBFOX310082.803Colobus_angolensis_palliatus
ENSAOCG00000012358rbfox3b8168.103ENSCGRG00001019476Rbfox310071.625Cricetulus_griseus_chok1gshd
ENSAOCG00000012358rbfox3b8168.103ENSCGRG00000003268Rbfox310071.625Cricetulus_griseus_crigri
ENSAOCG00000012358rbfox3b10077.778ENSCSEG00000020606RBFOX310076.965Cynoglossus_semilaevis
ENSAOCG00000012358rbfox3b10080.926ENSCSEG00000015567RBFOX39781.744Cynoglossus_semilaevis
ENSAOCG00000012358rbfox3b100100.000ENSCVAG00000006882rbfox3b100100.000Cyprinodon_variegatus
ENSAOCG00000012358rbfox3b10084.097ENSDARG00000010083rbfox3a10085.445Danio_rerio
ENSAOCG00000012358rbfox3b8578.594ENSDARG00000074310rbfox3b9679.730Danio_rerio
ENSAOCG00000012358rbfox3b6668.621ENSDNOG00000039391RBFOX39660.000Dasypus_novemcinctus
ENSAOCG00000012358rbfox3b8163.663ENSDORG00000005352Rbfox310063.231Dipodomys_ordii
ENSAOCG00000012358rbfox3b9764.420ENSEBUG00000002129RBFOX39569.027Eptatretus_burgeri
ENSAOCG00000012358rbfox3b7756.552ENSEBUG00000013559RBFOX38853.651Eptatretus_burgeri
ENSAOCG00000012358rbfox3b8180.132ENSEASG00005005059RBFOX310082.278Equus_asinus_asinus
ENSAOCG00000012358rbfox3b8179.801ENSECAG00000023811RBFOX310081.962Equus_caballus
ENSAOCG00000012358rbfox3b7276.056ENSEEUG00000013974RBFOX37286.885Erinaceus_europaeus
ENSAOCG00000012358rbfox3b5263.776ENSELUG00000009807-6455.357Esox_lucius
ENSAOCG00000012358rbfox3b10094.823ENSELUG00000017963rbfox3b10094.823Esox_lucius
ENSAOCG00000012358rbfox3b9879.722ENSFCAG00000002555RBFOX310081.847Felis_catus
ENSAOCG00000012358rbfox3b9068.132ENSFALG00000012288RBFOX38968.595Ficedula_albicollis
ENSAOCG00000012358rbfox3b8164.000ENSFDAG00000007489RBFOX310065.934Fukomys_damarensis
ENSAOCG00000012358rbfox3b8589.744ENSFHEG00000008550rbfox3b10089.744Fundulus_heteroclitus
ENSAOCG00000012358rbfox3b8567.778ENSGMOG00000019304-9668.611Gadus_morhua
ENSAOCG00000012358rbfox3b9882.402ENSGALG00000032889RBFOX39984.314Gallus_gallus
ENSAOCG00000012358rbfox3b10092.643ENSGAFG00000005025rbfox3b10092.643Gambusia_affinis
ENSAOCG00000012358rbfox3b8170.774ENSGACG00000002138-9671.703Gasterosteus_aculeatus
ENSAOCG00000012358rbfox3b9884.034ENSGAGG00000020025RBFOX310083.706Gopherus_agassizii
ENSAOCG00000012358rbfox3b8180.000ENSGGOG00000012546RBFOX310082.803Gorilla_gorilla
ENSAOCG00000012358rbfox3b10099.183ENSHBUG00000018099rbfox3b10099.183Haplochromis_burtoni
ENSAOCG00000012358rbfox3b9081.024ENSHBUG00000023098-9581.928Haplochromis_burtoni
ENSAOCG00000012358rbfox3b8168.750ENSHGLG00000008679RBFOX310070.219Heterocephalus_glaber_female
ENSAOCG00000012358rbfox3b8165.625ENSHGLG00100014739RBFOX39667.213Heterocephalus_glaber_male
ENSAOCG00000012358rbfox3b8574.038ENSHCOG00000001863RBFOX39274.841Hippocampus_comes
ENSAOCG00000012358rbfox3b9880.055ENSHCOG00000007444RBFOX39381.644Hippocampus_comes
ENSAOCG00000012358rbfox3b8573.837ENSIPUG00000021966rbfox3b9885.985Ictalurus_punctatus
ENSAOCG00000012358rbfox3b10082.210ENSIPUG00000012010rbfox3a10084.097Ictalurus_punctatus
ENSAOCG00000012358rbfox3b8163.816ENSSTOG00000026817RBFOX310065.938Ictidomys_tridecemlineatus
ENSAOCG00000012358rbfox3b8167.435ENSJJAG00000014167Rbfox310071.745Jaculus_jaculus
ENSAOCG00000012358rbfox3b100100.000ENSKMAG00000006726rbfox3b100100.000Kryptolebias_marmoratus
ENSAOCG00000012358rbfox3b10085.831ENSLBEG00000022508-10085.831Labrus_bergylta
ENSAOCG00000012358rbfox3b10099.452ENSLBEG00000004030rbfox3b10099.452Labrus_bergylta
ENSAOCG00000012358rbfox3b8871.549ENSLACG00000018409-9072.958Latimeria_chalumnae
ENSAOCG00000012358rbfox3b8888.650ENSLOCG00000012267rbfox3a9890.491Lepisosteus_oculatus
ENSAOCG00000012358rbfox3b8973.876ENSLAFG00000016623RBFOX39671.468Loxodonta_africana
ENSAOCG00000012358rbfox3b8168.497ENSMFAG00000002247RBFOX310072.299Macaca_fascicularis
ENSAOCG00000012358rbfox3b8180.000ENSMMUG00000023028RBFOX310082.803Macaca_mulatta
ENSAOCG00000012358rbfox3b8179.667ENSMNEG00000041147RBFOX310082.484Macaca_nemestrina
ENSAOCG00000012358rbfox3b8180.000ENSMLEG00000025686RBFOX310082.803Mandrillus_leucophaeus
ENSAOCG00000012358rbfox3b8588.782ENSMAMG00000019810rbfox3b9987.821Mastacembelus_armatus
ENSAOCG00000012358rbfox3b8980.368ENSMAMG00000020600-9380.308Mastacembelus_armatus
ENSAOCG00000012358rbfox3b10099.183ENSMZEG00005000781rbfox3b10099.178Maylandia_zebra
ENSAOCG00000012358rbfox3b8362.500ENSMZEG00005003055-8162.500Maylandia_zebra
ENSAOCG00000012358rbfox3b6080.909ENSMGAG00000005600RBFOX38381.279Meleagris_gallopavo
ENSAOCG00000012358rbfox3b8169.452ENSMAUG00000013543Rbfox310070.248Mesocricetus_auratus
ENSAOCG00000012358rbfox3b8881.481ENSMICG00000014898RBFOX310081.789Microcebus_murinus
ENSAOCG00000012358rbfox3b8167.147ENSMOCG00000015373Rbfox310070.718Microtus_ochrogaster
ENSAOCG00000012358rbfox3b10097.290ENSMMOG00000020193rbfox3b10097.290Mola_mola
ENSAOCG00000012358rbfox3b9880.501ENSMODG00000002089RBFOX39982.402Monodelphis_domestica
ENSAOCG00000012358rbfox3b10083.379ENSMALG00000018270-10084.196Monopterus_albus
ENSAOCG00000012358rbfox3b10098.093ENSMALG00000020407rbfox3b10098.093Monopterus_albus
ENSAOCG00000012358rbfox3b8178.667MGP_CAROLIEiJ_G0017487Rbfox39689.209Mus_caroli
ENSAOCG00000012358rbfox3b8180.399ENSMUSG00000025576Rbfox39689.209Mus_musculus
ENSAOCG00000012358rbfox3b8179.402MGP_PahariEiJ_G0018614Rbfox39689.928Mus_pahari
ENSAOCG00000012358rbfox3b8179.000MGP_SPRETEiJ_G0018331Rbfox39689.209Mus_spretus
ENSAOCG00000012358rbfox3b8972.055ENSMPUG00000012319RBFOX39573.497Mustela_putorius_furo
ENSAOCG00000012358rbfox3b8168.103ENSNGAG00000018006Rbfox310071.823Nannospalax_galili
ENSAOCG00000012358rbfox3b10098.093ENSNBRG00000010102rbfox3b10098.093Neolamprologus_brichardi
ENSAOCG00000012358rbfox3b9075.758ENSNBRG00000022885-9175.602Neolamprologus_brichardi
ENSAOCG00000012358rbfox3b8556.051ENSNLEG00000000153-9556.230Nomascus_leucogenys
ENSAOCG00000012358rbfox3b7985.106ENSMEUG00000004218-10054.167Notamacropus_eugenii
ENSAOCG00000012358rbfox3b6876.963ENSOPRG00000016279-7181.667Ochotona_princeps
ENSAOCG00000012358rbfox3b8181.728ENSODEG00000009433RBFOX310082.222Octodon_degus
ENSAOCG00000012358rbfox3b10099.728ENSONIG00000009549rbfox3b10099.728Oreochromis_niloticus
ENSAOCG00000012358rbfox3b9279.646ENSONIG00000007282-9980.531Oreochromis_niloticus
ENSAOCG00000012358rbfox3b6165.283ENSOCUG00000014217RBFOX37762.989Oryctolagus_cuniculus
ENSAOCG00000012358rbfox3b10098.638ENSORLG00000000905rbfox3b7998.082Oryzias_latipes
ENSAOCG00000012358rbfox3b10098.638ENSORLG00020018030rbfox3b9998.082Oryzias_latipes_hni
ENSAOCG00000012358rbfox3b10098.910ENSORLG00015009200rbfox3b10098.910Oryzias_latipes_hsok
ENSAOCG00000012358rbfox3b8592.705ENSOMEG00000014677rbfox3b8692.705Oryzias_melastigma
ENSAOCG00000012358rbfox3b8979.573ENSOGAG00000029595RBFOX38781.707Otolemur_garnettii
ENSAOCG00000012358rbfox3b8859.026ENSOARG00000002908RBFOX38959.544Ovis_aries
ENSAOCG00000012358rbfox3b6981.961ENSPPAG00000025383RBFOX39981.882Pan_paniscus
ENSAOCG00000012358rbfox3b8167.647ENSPPRG00000007819RBFOX310072.394Panthera_pardus
ENSAOCG00000012358rbfox3b8180.000ENSPTRG00000009727RBFOX310082.803Pan_troglodytes
ENSAOCG00000012358rbfox3b8180.000ENSPANG00000019837RBFOX310082.803Papio_anubis
ENSAOCG00000012358rbfox3b9071.646ENSPKIG00000022633-9668.421Paramormyrops_kingsleyae
ENSAOCG00000012358rbfox3b10088.235ENSPKIG00000010299rbfox3a9988.439Paramormyrops_kingsleyae
ENSAOCG00000012358rbfox3b8791.975ENSPMGG00000008000rbfox3b10092.260Periophthalmus_magnuspinnatus
ENSAOCG00000012358rbfox3b8167.723ENSPEMG00000010500Rbfox310071.271Peromyscus_maniculatus_bairdii
ENSAOCG00000012358rbfox3b9871.675ENSPCIG00000005766RBFOX310073.482Phascolarctos_cinereus
ENSAOCG00000012358rbfox3b100100.000ENSPFOG00000018294rbfox3b96100.000Poecilia_formosa
ENSAOCG00000012358rbfox3b6594.142ENSPLAG00000000481rbfox3b7394.118Poecilia_latipinna
ENSAOCG00000012358rbfox3b8590.064ENSPMEG00000022997rbfox3b10090.064Poecilia_mexicana
ENSAOCG00000012358rbfox3b10099.457ENSPREG00000012886rbfox3b9999.457Poecilia_reticulata
ENSAOCG00000012358rbfox3b7775.532ENSPPYG00000008704RBFOX38875.251Pongo_abelii
ENSAOCG00000012358rbfox3b8165.607ENSPCAG00000001401RBFOX310065.097Procavia_capensis
ENSAOCG00000012358rbfox3b8568.698ENSPCOG00000012689RBFOX310071.468Propithecus_coquereli
ENSAOCG00000012358rbfox3b8159.366ENSPVAG00000015243RBFOX310063.812Pteropus_vampyrus
ENSAOCG00000012358rbfox3b10077.260ENSPNYG00000009079-9677.112Pundamilia_nyererei
ENSAOCG00000012358rbfox3b10086.921ENSPNYG00000010414rbfox3b9986.921Pundamilia_nyererei
ENSAOCG00000012358rbfox3b8571.154ENSPNAG00000018173rbfox3b9071.154Pygocentrus_nattereri
ENSAOCG00000012358rbfox3b10083.820ENSPNAG00000002889rbfox3a10085.484Pygocentrus_nattereri
ENSAOCG00000012358rbfox3b8179.402ENSRNOG00000003386Rbfox310081.962Rattus_norvegicus
ENSAOCG00000012358rbfox3b9880.000ENSRBIG00000040449RBFOX39981.894Rhinopithecus_bieti
ENSAOCG00000012358rbfox3b8180.000ENSRROG00000000766RBFOX310082.803Rhinopithecus_roxellana
ENSAOCG00000012358rbfox3b8179.667ENSSBOG00000031591RBFOX310082.484Saimiri_boliviensis_boliviensis
ENSAOCG00000012358rbfox3b8974.581ENSSHAG00000016076RBFOX310073.482Sarcophilus_harrisii
ENSAOCG00000012358rbfox3b9873.204ENSSFOG00015004716RBFOX39972.928Scleropages_formosus
ENSAOCG00000012358rbfox3b10086.631ENSSFOG00015023260rbfox3a10087.968Scleropages_formosus
ENSAOCG00000012358rbfox3b10095.052ENSSMAG00000012618rbfox3b8795.052Scophthalmus_maximus
ENSAOCG00000012358rbfox3b10082.016ENSSMAG00000019052-10083.121Scophthalmus_maximus
ENSAOCG00000012358rbfox3b8589.744ENSSDUG00000023183rbfox3b10089.744Seriola_dumerili
ENSAOCG00000012358rbfox3b10076.839ENSSDUG00000015801-9877.657Seriola_dumerili
ENSAOCG00000012358rbfox3b10080.109ENSSLDG00000016098-9880.926Seriola_lalandi_dorsalis
ENSAOCG00000012358rbfox3b10099.728ENSSLDG00000000149rbfox3b10099.728Seriola_lalandi_dorsalis
ENSAOCG00000012358rbfox3b9874.930ENSSPUG00000011733RBFOX39983.706Sphenodon_punctatus
ENSAOCG00000012358rbfox3b7477.574ENSSPAG00000004898-8578.049Stegastes_partitus
ENSAOCG00000012358rbfox3b10091.507ENSSPAG00000017571rbfox3b9991.507Stegastes_partitus
ENSAOCG00000012358rbfox3b7481.250ENSSSCG00000039498RBFOX39670.755Sus_scrofa
ENSAOCG00000012358rbfox3b8989.851ENSTRUG00000004894rbfox3b9390.090Takifugu_rubripes
ENSAOCG00000012358rbfox3b9088.333ENSTNIG00000011278rbfox3b9088.333Tetraodon_nigroviridis
ENSAOCG00000012358rbfox3b7448.101ENSTBEG00000004296-8951.964Tupaia_belangeri
ENSAOCG00000012358rbfox3b8162.717ENSTTRG00000003676RBFOX310066.759Tursiops_truncatus
ENSAOCG00000012358rbfox3b8180.000ENSUAMG00000004668RBFOX310082.803Ursus_americanus
ENSAOCG00000012358rbfox3b9880.278ENSVVUG00000017864RBFOX310082.484Vulpes_vulpes
ENSAOCG00000012358rbfox3b8966.954ENSXETG00000020236rbfox38867.147Xenopus_tropicalis
ENSAOCG00000012358rbfox3b9898.061ENSXCOG00000018262rbfox3b10098.061Xiphophorus_couchianus
ENSAOCG00000012358rbfox3b10099.728ENSXMAG00000012939rbfox3b10099.728Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us