EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAOCG00000012380 (Gene tree)
Gene ID: 111570505
Gene Symbol: lsm14b
Alias: zRAP55|zgc:55673
Full Name: protein LSM14 homolog B-like
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Minus strand
Length: 2680 bases
Position: chrNXFZ01002452.1:66181-68860
Accession: 111570505
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000025060	FDF	PF09532.10	7.1e-08	1	1
ENSAOCP00000025060	SM-ATX	PF14438.6	1.2e-08	1	1
ENSAOCP00000025060	LSM14	PF12701.7	2.2e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000001180	-	1819	XM_023273307	ENSAOCP00000025060	367 (aa)	XP_023129075	UPI000C3163E8

Gene Model

Click here to download ENSAOCG00000012380's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000012380's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAOCG00000012380	lsm14b	91	42.711	ENSAOCG00000001256	lsm14ab	85	43.750
ENSAOCG00000012380	lsm14b	90	39.659	ENSAOCG00000004910	lsm14aa	85	40.741
ENSAOCG00000012380	lsm14b	93	50.404	ENSAOCG00000006667	LSM14B	89	49.575

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000012380	lsm14b	92	56.131	ENSG00000149657	LSM14B	100	52.903	Homo_sapiens
ENSAOCG00000012380	lsm14b	100	97.820	ENSAPOG00000001780	lsm14b	100	97.820	Acanthochromis_polyacanthus
ENSAOCG00000012380	lsm14b	91	49.876	ENSAMEG00000013430	LSM14B	91	49.497	Ailuropoda_melanoleuca
ENSAOCG00000012380	lsm14b	61	42.213	ENSACIG00000003147	LSM14B	87	41.597	Amphilophus_citrinellus
ENSAOCG00000012380	lsm14b	99	78.177	ENSACIG00000012266	lsm14b	99	76.712	Amphilophus_citrinellus
ENSAOCG00000012380	lsm14b	100	83.651	ENSAPEG00000023633	lsm14b	100	83.924	Amphiprion_percula
ENSAOCG00000012380	lsm14b	100	80.053	ENSATEG00000016603	lsm14b	100	80.053	Anabas_testudineus
ENSAOCG00000012380	lsm14b	65	42.958	ENSATEG00000015895	LSM14B	88	43.860	Anabas_testudineus
ENSAOCG00000012380	lsm14b	81	46.196	ENSAPLG00000013203	LSM14B	89	47.368	Anas_platyrhynchos
ENSAOCG00000012380	lsm14b	99	54.315	ENSACAG00000016195	LSM14B	89	54.902	Anolis_carolinensis
ENSAOCG00000012380	lsm14b	92	55.707	ENSANAG00000037915	LSM14B	90	55.372	Aotus_nancymaae
ENSAOCG00000012380	lsm14b	52	42.105	ENSACLG00000019624	-	67	40.201	Astatotilapia_calliptera
ENSAOCG00000012380	lsm14b	52	40.670	ENSACLG00000011955	-	66	38.384	Astatotilapia_calliptera
ENSAOCG00000012380	lsm14b	100	83.243	ENSACLG00000019663	lsm14b	100	83.243	Astatotilapia_calliptera
ENSAOCG00000012380	lsm14b	90	61.345	ENSAMXG00000002865	lsm14b	90	62.465	Astyanax_mexicanus
ENSAOCG00000012380	lsm14b	92	50.614	ENSBTAG00000021558	LSM14B	91	50.000	Bos_taurus
ENSAOCG00000012380	lsm14b	92	56.948	ENSCJAG00000014434	LSM14B	90	56.630	Callithrix_jacchus
ENSAOCG00000012380	lsm14b	81	46.995	ENSCAFG00000012518	LSM14B	89	46.537	Canis_familiaris
ENSAOCG00000012380	lsm14b	92	56.164	ENSCAFG00020022150	LSM14B	90	55.833	Canis_lupus_dingo
ENSAOCG00000012380	lsm14b	94	42.819	ENSCHIG00000022681	-	90	42.618	Capra_hircus
ENSAOCG00000012380	lsm14b	92	56.486	ENSCHIG00000010284	-	90	56.164	Capra_hircus
ENSAOCG00000012380	lsm14b	80	53.067	ENSTSYG00000031914	LSM14B	79	52.648	Carlito_syrichta
ENSAOCG00000012380	lsm14b	81	53.538	ENSCAPG00000013059	LSM14B	89	53.125	Cavia_aperea
ENSAOCG00000012380	lsm14b	80	53.704	ENSCPOG00000038080	LSM14B	89	53.292	Cavia_porcellus
ENSAOCG00000012380	lsm14b	92	55.978	ENSCCAG00000021267	LSM14B	90	55.647	Cebus_capucinus
ENSAOCG00000012380	lsm14b	92	39.945	ENSCCAG00000024900	-	76	38.786	Cebus_capucinus
ENSAOCG00000012380	lsm14b	92	56.676	ENSCATG00000036006	LSM14B	90	56.354	Cercocebus_atys
ENSAOCG00000012380	lsm14b	80	53.086	ENSCLAG00000003186	LSM14B	89	52.665	Chinchilla_lanigera
ENSAOCG00000012380	lsm14b	92	50.735	ENSCSAG00000015729	LSM14B	91	50.372	Chlorocebus_sabaeus
ENSAOCG00000012380	lsm14b	67	35.507	ENSCHOG00000006997	-	86	35.685	Choloepus_hoffmanni
ENSAOCG00000012380	lsm14b	91	51.250	ENSCPBG00000027065	LSM14B	91	50.886	Chrysemys_picta_bellii
ENSAOCG00000012380	lsm14b	80	52.778	ENSCANG00000036986	LSM14B	89	52.351	Colobus_angolensis_palliatus
ENSAOCG00000012380	lsm14b	92	55.586	ENSCGRG00001018399	Lsm14b	90	55.249	Cricetulus_griseus_chok1gshd
ENSAOCG00000012380	lsm14b	60	40.909	ENSCGRG00000006111	-	90	40.214	Cricetulus_griseus_crigri
ENSAOCG00000012380	lsm14b	52	42.453	ENSCGRG00000002484	-	80	40.580	Cricetulus_griseus_crigri
ENSAOCG00000012380	lsm14b	100	78.191	ENSCSEG00000004722	lsm14b	100	78.191	Cynoglossus_semilaevis
ENSAOCG00000012380	lsm14b	93	48.501	ENSCSEG00000020669	LSM14B	90	46.991	Cynoglossus_semilaevis
ENSAOCG00000012380	lsm14b	62	35.918	ENSCVAG00000012433	-	89	35.146	Cyprinodon_variegatus
ENSAOCG00000012380	lsm14b	99	55.784	ENSDARG00000025386	lsm14b	90	56.901	Danio_rerio
ENSAOCG00000012380	lsm14b	60	41.608	ENSDNOG00000025246	LSM14B	88	41.549	Dasypus_novemcinctus
ENSAOCG00000012380	lsm14b	81	54.434	ENSDORG00000016683	Lsm14b	78	54.037	Dipodomys_ordii
ENSAOCG00000012380	lsm14b	56	39.744	ENSETEG00000011188	-	99	41.633	Echinops_telfairi
ENSAOCG00000012380	lsm14b	92	43.836	ENSETEG00000001869	-	89	42.735	Echinops_telfairi
ENSAOCG00000012380	lsm14b	60	44.898	ENSEASG00005023218	LSM14B	88	41.281	Equus_asinus_asinus
ENSAOCG00000012380	lsm14b	92	56.403	ENSECAG00000010659	LSM14B	90	56.077	Equus_caballus
ENSAOCG00000012380	lsm14b	55	69.000	ENSEEUG00000007331	LSM14B	79	69.000	Erinaceus_europaeus
ENSAOCG00000012380	lsm14b	90	51.744	ENSELUG00000016299	LSM14B	90	51.744	Esox_lucius
ENSAOCG00000012380	lsm14b	98	64.921	ENSELUG00000005780	lsm14b	99	63.874	Esox_lucius
ENSAOCG00000012380	lsm14b	92	56.403	ENSFCAG00000003248	LSM14B	90	56.077	Felis_catus
ENSAOCG00000012380	lsm14b	81	48.087	ENSFALG00000010618	LSM14B	90	47.091	Ficedula_albicollis
ENSAOCG00000012380	lsm14b	80	52.778	ENSFDAG00000002214	LSM14B	89	52.351	Fukomys_damarensis
ENSAOCG00000012380	lsm14b	71	50.725	ENSFHEG00000003362	LSM14B	70	50.530	Fundulus_heteroclitus
ENSAOCG00000012380	lsm14b	100	76.757	ENSFHEG00000006237	lsm14b	100	76.757	Fundulus_heteroclitus
ENSAOCG00000012380	lsm14b	100	66.216	ENSGMOG00000017115	lsm14b	99	65.147	Gadus_morhua
ENSAOCG00000012380	lsm14b	91	53.973	ENSGALG00000005125	LSM14B	90	54.722	Gallus_gallus
ENSAOCG00000012380	lsm14b	65	39.286	ENSGAFG00000013723	LSM14B	85	38.767	Gambusia_affinis
ENSAOCG00000012380	lsm14b	100	72.654	ENSGAFG00000020318	lsm14b	100	72.654	Gambusia_affinis
ENSAOCG00000012380	lsm14b	99	79.625	ENSGACG00000009973	lsm14b	99	79.625	Gasterosteus_aculeatus
ENSAOCG00000012380	lsm14b	54	46.606	ENSGAGG00000004106	LSM14B	78	44.907	Gopherus_agassizii
ENSAOCG00000012380	lsm14b	82	52.121	ENSGGOG00000005630	LSM14B	85	51.692	Gorilla_gorilla
ENSAOCG00000012380	lsm14b	92	55.978	ENSHGLG00000015055	LSM14B	90	55.647	Heterocephalus_glaber_female
ENSAOCG00000012380	lsm14b	80	52.012	ENSHGLG00100015273	LSM14B	89	51.572	Heterocephalus_glaber_male
ENSAOCG00000012380	lsm14b	93	46.995	ENSHCOG00000018747	LSM14B	90	47.126	Hippocampus_comes
ENSAOCG00000012380	lsm14b	68	60.392	ENSHCOG00000004867	lsm14b	100	59.216	Hippocampus_comes
ENSAOCG00000012380	lsm14b	91	61.944	ENSIPUG00000014946	lsm14b	85	62.606	Ictalurus_punctatus
ENSAOCG00000012380	lsm14b	80	52.778	ENSSTOG00000020482	LSM14B	89	52.351	Ictidomys_tridecemlineatus
ENSAOCG00000012380	lsm14b	91	55.525	ENSJJAG00000012728	Lsm14b	89	55.182	Jaculus_jaculus
ENSAOCG00000012380	lsm14b	100	80.811	ENSKMAG00000017524	lsm14b	100	80.811	Kryptolebias_marmoratus
ENSAOCG00000012380	lsm14b	51	43.069	ENSKMAG00000012834	-	86	42.857	Kryptolebias_marmoratus
ENSAOCG00000012380	lsm14b	65	39.442	ENSLBEG00000007951	LSM14B	85	36.681	Labrus_bergylta
ENSAOCG00000012380	lsm14b	91	50.500	ENSLACG00000003849	LSM14B	91	50.500	Latimeria_chalumnae
ENSAOCG00000012380	lsm14b	99	59.278	ENSLOCG00000003746	lsm14b	90	59.943	Lepisosteus_oculatus
ENSAOCG00000012380	lsm14b	81	49.699	ENSLAFG00000007492	LSM14B	89	51.077	Loxodonta_africana
ENSAOCG00000012380	lsm14b	92	56.403	ENSMFAG00000041479	LSM14B	90	56.077	Macaca_fascicularis
ENSAOCG00000012380	lsm14b	92	56.403	ENSMMUG00000014084	LSM14B	90	56.077	Macaca_mulatta
ENSAOCG00000012380	lsm14b	92	56.403	ENSMNEG00000045573	LSM14B	90	56.077	Macaca_nemestrina
ENSAOCG00000012380	lsm14b	80	53.395	ENSMLEG00000040895	LSM14B	89	52.978	Mandrillus_leucophaeus
ENSAOCG00000012380	lsm14b	100	81.283	ENSMAMG00000020539	lsm14b	100	81.283	Mastacembelus_armatus
ENSAOCG00000012380	lsm14b	92	52.557	ENSMAMG00000024124	LSM14B	89	51.613	Mastacembelus_armatus
ENSAOCG00000012380	lsm14b	91	47.765	ENSMZEG00005026001	LSM14B	93	49.288	Maylandia_zebra
ENSAOCG00000012380	lsm14b	100	83.514	ENSMZEG00005000987	lsm14b	100	83.514	Maylandia_zebra
ENSAOCG00000012380	lsm14b	82	49.701	ENSMGAG00000005300	LSM14B	89	49.699	Meleagris_gallopavo
ENSAOCG00000012380	lsm14b	92	55.495	ENSMAUG00000020700	Lsm14b	90	55.153	Mesocricetus_auratus
ENSAOCG00000012380	lsm14b	92	56.522	ENSMICG00000014675	LSM14B	88	60.199	Microcebus_murinus
ENSAOCG00000012380	lsm14b	92	55.769	ENSMOCG00000020600	Lsm14b	90	54.696	Microtus_ochrogaster
ENSAOCG00000012380	lsm14b	61	40.377	ENSMOCG00000005119	-	91	39.535	Microtus_ochrogaster
ENSAOCG00000012380	lsm14b	90	51.304	ENSMMOG00000017321	LSM14B	89	49.560	Mola_mola
ENSAOCG00000012380	lsm14b	89	72.626	ENSMMOG00000020042	lsm14b	93	72.626	Mola_mola
ENSAOCG00000012380	lsm14b	60	41.781	ENSMODG00000016690	LSM14B	88	41.115	Monodelphis_domestica
ENSAOCG00000012380	lsm14b	91	48.066	ENSMALG00000022251	LSM14B	89	49.003	Monopterus_albus
ENSAOCG00000012380	lsm14b	100	80.054	ENSMALG00000004783	lsm14b	97	80.863	Monopterus_albus
ENSAOCG00000012380	lsm14b	92	56.044	MGP_CAROLIEiJ_G0024770	Lsm14b	90	55.710	Mus_caroli
ENSAOCG00000012380	lsm14b	92	56.044	ENSMUSG00000039108	Lsm14b	90	55.710	Mus_musculus
ENSAOCG00000012380	lsm14b	92	56.044	MGP_PahariEiJ_G0026214	Lsm14b	90	55.710	Mus_pahari
ENSAOCG00000012380	lsm14b	92	56.044	MGP_SPRETEiJ_G0025693	Lsm14b	90	55.710	Mus_spretus
ENSAOCG00000012380	lsm14b	86	46.475	ENSMPUG00000007584	LSM14B	91	45.646	Mustela_putorius_furo
ENSAOCG00000012380	lsm14b	91	56.510	ENSMLUG00000000304	LSM14B	90	56.077	Myotis_lucifugus
ENSAOCG00000012380	lsm14b	59	43.265	ENSNGAG00000016550	Lsm14b	84	43.269	Nannospalax_galili
ENSAOCG00000012380	lsm14b	80	53.086	ENSNLEG00000015757	LSM14B	89	52.665	Nomascus_leucogenys
ENSAOCG00000012380	lsm14b	65	74.126	ENSMEUG00000008267	-	70	74.126	Notamacropus_eugenii
ENSAOCG00000012380	lsm14b	92	56.403	ENSODEG00000004099	LSM14B	90	56.077	Octodon_degus
ENSAOCG00000012380	lsm14b	100	84.865	ENSONIG00000020318	lsm14b	100	84.865	Oreochromis_niloticus
ENSAOCG00000012380	lsm14b	75	54.643	ENSOANG00000003370	LSM14B	96	54.643	Ornithorhynchus_anatinus
ENSAOCG00000012380	lsm14b	81	53.067	ENSOCUG00000006279	LSM14B	89	52.648	Oryctolagus_cuniculus
ENSAOCG00000012380	lsm14b	92	46.779	ENSORLG00000028353	LSM14B	90	45.821	Oryzias_latipes
ENSAOCG00000012380	lsm14b	100	81.843	ENSORLG00000013525	lsm14b	100	83.469	Oryzias_latipes
ENSAOCG00000012380	lsm14b	62	35.019	ENSORLG00020018191	-	85	34.677	Oryzias_latipes_hni
ENSAOCG00000012380	lsm14b	100	81.843	ENSORLG00020020553	lsm14b	100	83.469	Oryzias_latipes_hni
ENSAOCG00000012380	lsm14b	92	47.059	ENSORLG00015013157	LSM14B	90	46.110	Oryzias_latipes_hsok
ENSAOCG00000012380	lsm14b	100	81.843	ENSORLG00015016862	lsm14b	100	83.469	Oryzias_latipes_hsok
ENSAOCG00000012380	lsm14b	100	81.471	ENSOMEG00000023917	lsm14b	100	83.106	Oryzias_melastigma
ENSAOCG00000012380	lsm14b	62	38.655	ENSOMEG00000000171	-	83	36.000	Oryzias_melastigma
ENSAOCG00000012380	lsm14b	92	50.000	ENSOGAG00000003915	LSM14B	91	49.630	Otolemur_garnettii
ENSAOCG00000012380	lsm14b	83	47.312	ENSOARG00000014706	LSM14B	88	47.222	Ovis_aries
ENSAOCG00000012380	lsm14b	82	52.121	ENSPPAG00000035799	LSM14B	85	51.692	Pan_paniscus
ENSAOCG00000012380	lsm14b	92	56.403	ENSPPRG00000009197	LSM14B	90	56.077	Panthera_pardus
ENSAOCG00000012380	lsm14b	60	44.490	ENSPTIG00000021518	LSM14B	91	40.636	Panthera_tigris_altaica
ENSAOCG00000012380	lsm14b	92	56.131	ENSPTRG00000013696	LSM14B	90	55.801	Pan_troglodytes
ENSAOCG00000012380	lsm14b	92	56.403	ENSPANG00000011747	LSM14B	90	56.077	Papio_anubis
ENSAOCG00000012380	lsm14b	91	61.364	ENSPKIG00000003275	lsm14b	94	73.585	Paramormyrops_kingsleyae
ENSAOCG00000012380	lsm14b	81	53.988	ENSPSIG00000014762	LSM14B	89	53.750	Pelodiscus_sinensis
ENSAOCG00000012380	lsm14b	91	55.801	ENSPEMG00000017688	Lsm14b	90	55.462	Peromyscus_maniculatus_bairdii
ENSAOCG00000012380	lsm14b	92	54.987	ENSPCIG00000013405	LSM14B	90	56.557	Phascolarctos_cinereus
ENSAOCG00000012380	lsm14b	100	77.358	ENSPFOG00000005631	lsm14b	100	77.358	Poecilia_formosa
ENSAOCG00000012380	lsm14b	100	76.819	ENSPLAG00000002449	lsm14b	100	76.819	Poecilia_latipinna
ENSAOCG00000012380	lsm14b	89	48.276	ENSPLAG00000005793	LSM14B	89	47.801	Poecilia_latipinna
ENSAOCG00000012380	lsm14b	88	47.701	ENSPMEG00000022953	LSM14B	89	47.813	Poecilia_mexicana
ENSAOCG00000012380	lsm14b	100	77.628	ENSPMEG00000000745	lsm14b	100	77.628	Poecilia_mexicana
ENSAOCG00000012380	lsm14b	61	39.759	ENSPREG00000007828	LSM14B	85	38.272	Poecilia_reticulata
ENSAOCG00000012380	lsm14b	92	51.087	ENSPPYG00000011194	LSM14B	90	51.233	Pongo_abelii
ENSAOCG00000012380	lsm14b	92	56.098	ENSPCOG00000013625	LSM14B	88	58.454	Propithecus_coquereli
ENSAOCG00000012380	lsm14b	90	63.897	ENSPNAG00000012777	lsm14b	90	64.183	Pygocentrus_nattereri
ENSAOCG00000012380	lsm14b	92	50.124	ENSRNOG00000054557	Lsm14b	91	49.749	Rattus_norvegicus
ENSAOCG00000012380	lsm14b	81	52.615	ENSRBIG00000033461	LSM14B	88	52.188	Rhinopithecus_bieti
ENSAOCG00000012380	lsm14b	82	53.776	ENSRROG00000042949	LSM14B	81	53.374	Rhinopithecus_roxellana
ENSAOCG00000012380	lsm14b	80	52.000	ENSSBOG00000032820	LSM14B	89	51.562	Saimiri_boliviensis_boliviensis
ENSAOCG00000012380	lsm14b	81	53.191	ENSSHAG00000015528	LSM14B	86	52.778	Sarcophilus_harrisii
ENSAOCG00000012380	lsm14b	90	61.671	ENSSFOG00015004627	lsm14b	91	62.248	Scleropages_formosus
ENSAOCG00000012380	lsm14b	100	84.840	ENSSMAG00000012725	lsm14b	100	84.840	Scophthalmus_maximus
ENSAOCG00000012380	lsm14b	94	49.468	ENSSMAG00000000135	LSM14B	89	49.438	Scophthalmus_maximus
ENSAOCG00000012380	lsm14b	100	88.770	ENSSDUG00000020977	lsm14b	100	88.770	Seriola_dumerili
ENSAOCG00000012380	lsm14b	91	52.793	ENSSDUG00000022770	LSM14B	89	52.299	Seriola_dumerili
ENSAOCG00000012380	lsm14b	61	46.185	ENSSLDG00000011354	-	87	44.177	Seriola_lalandi_dorsalis
ENSAOCG00000012380	lsm14b	51	42.523	ENSSARG00000007749	-	97	44.860	Sorex_araneus
ENSAOCG00000012380	lsm14b	91	52.120	ENSSPUG00000014360	LSM14B	95	54.571	Sphenodon_punctatus
ENSAOCG00000012380	lsm14b	100	85.676	ENSSPAG00000020915	lsm14b	100	85.946	Stegastes_partitus
ENSAOCG00000012380	lsm14b	66	40.741	ENSSPAG00000018854	-	86	38.934	Stegastes_partitus
ENSAOCG00000012380	lsm14b	92	56.593	ENSSSCG00000026052	LSM14B	75	56.546	Sus_scrofa
ENSAOCG00000012380	lsm14b	81	53.517	ENSTGUG00000007884	LSM14B	89	53.106	Taeniopygia_guttata
ENSAOCG00000012380	lsm14b	100	79.133	ENSTRUG00000011354	lsm14b	100	79.133	Takifugu_rubripes
ENSAOCG00000012380	lsm14b	91	54.520	ENSTRUG00000001529	LSM14B	90	53.890	Takifugu_rubripes
ENSAOCG00000012380	lsm14b	100	71.501	ENSTNIG00000002445	lsm14b	100	71.501	Tetraodon_nigroviridis
ENSAOCG00000012380	lsm14b	74	80.952	ENSTTRG00000011043	LSM14B	90	39.237	Tursiops_truncatus
ENSAOCG00000012380	lsm14b	89	50.281	ENSUAMG00000025298	LSM14B	89	49.858	Ursus_americanus
ENSAOCG00000012380	lsm14b	89	50.281	ENSUMAG00000000480	LSM14B	89	49.858	Ursus_maritimus
ENSAOCG00000012380	lsm14b	81	52.615	ENSVVUG00000015920	LSM14B	88	52.500	Vulpes_vulpes
ENSAOCG00000012380	lsm14b	85	55.325	ENSXETG00000001997	lsm14b	99	55.060	Xenopus_tropicalis
ENSAOCG00000012380	lsm14b	100	75.135	ENSXMAG00000010013	lsm14b	100	75.135	Xiphophorus_maculatus