EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAOCG00000012420 (Gene tree)
Gene ID: 111564189
Gene Symbol: -
Alias: -
Full Name: snRNA-activating protein complex subunit 2-like
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Minus strand
Length: 5147 bases
Position: chrNXFZ01006321.1:589259-594405
Accession: 111564189
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000008436	SnAPC_2_like	PF11035.8	1.5e-35	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000001101	-	1455	XM_023263626	ENSAOCP00000008436	301 (aa)	XP_023119394	-

Gene Model

Click here to download ENSAOCG00000012420's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000012420's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAOCG00000012420	-	65	99.487	ENSAOCG00000013265	-	60	69.068

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000012420	-	65	48.500	ENSACIG00000019919	-	59	46.522	Amphilophus_citrinellus
ENSAOCG00000012420	-	100	99.003	ENSAPEG00000010950	-	61	99.003	Amphiprion_percula
ENSAOCG00000012420	-	99	46.089	ENSATEG00000003573	-	64	45.531	Anabas_testudineus
ENSAOCG00000012420	-	65	53.571	ENSACLG00000013092	-	59	44.223	Astatotilapia_calliptera
ENSAOCG00000012420	-	52	33.121	ENSCAPG00000013921	-	92	31.847	Cavia_aperea
ENSAOCG00000012420	-	53	31.250	ENSFDAG00000001564	SNAPC2	67	31.250	Fukomys_damarensis
ENSAOCG00000012420	-	53	50.314	ENSGACG00000000727	-	99	50.000	Gasterosteus_aculeatus
ENSAOCG00000012420	-	52	31.410	ENSJJAG00000003060	Snapc2	51	30.573	Jaculus_jaculus
ENSAOCG00000012420	-	99	40.656	ENSKMAG00000007231	-	59	40.717	Kryptolebias_marmoratus
ENSAOCG00000012420	-	57	43.353	ENSLBEG00000009986	-	57	42.667	Labrus_bergylta
ENSAOCG00000012420	-	99	44.954	ENSMAMG00000018195	-	68	44.037	Mastacembelus_armatus
ENSAOCG00000012420	-	65	54.082	ENSMZEG00005009488	-	55	49.819	Maylandia_zebra
ENSAOCG00000012420	-	52	32.692	ENSMAUG00000015015	Snapc2	51	32.484	Mesocricetus_auratus
ENSAOCG00000012420	-	85	50.000	ENSMMOG00000020608	-	60	50.000	Mola_mola
ENSAOCG00000012420	-	68	55.340	ENSMALG00000002335	-	60	51.515	Monopterus_albus
ENSAOCG00000012420	-	63	51.579	ENSNBRG00000003764	-	59	49.749	Neolamprologus_brichardi
ENSAOCG00000012420	-	98	41.275	ENSPFOG00000012045	-	59	41.275	Poecilia_formosa
ENSAOCG00000012420	-	98	41.611	ENSPLAG00000018873	-	58	43.578	Poecilia_latipinna
ENSAOCG00000012420	-	98	41.611	ENSPMEG00000002270	-	58	43.578	Poecilia_mexicana
ENSAOCG00000012420	-	98	40.000	ENSPREG00000003140	-	60	38.889	Poecilia_reticulata
ENSAOCG00000012420	-	99	45.634	ENSSDUG00000016949	-	64	47.207	Seriola_dumerili
ENSAOCG00000012420	-	99	63.898	ENSSPAG00000008637	-	68	64.217	Stegastes_partitus
ENSAOCG00000012420	-	83	42.460	ENSTRUG00000005122	-	77	42.922	Takifugu_rubripes
ENSAOCG00000012420	-	98	41.017	ENSXMAG00000027683	-	60	39.869	Xiphophorus_maculatus