EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAOCG00000012549 (Gene tree)
Gene ID: 111570077
Gene Symbol: npm1b
Alias: npm4
Full Name: nucleophosmin-like
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Minus strand
Length: 16953 bases
Position: chrNXFZ01002415.1:137995-154947
Accession: 111570077
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000025166	Nucleoplasmin	PF03066.15	1.6e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000000924	-	4076	XM_023272609	ENSAOCP00000025166	296 (aa)	XP_023128377	UPI000C30AE17

Gene Model

Click here to download ENSAOCG00000012549's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000012549's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAOCG00000012549	npm1b	50	32.000	ENSAOCG00000009376	npm3	85	31.928

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000012549	npm1b	100	96.980	ENSAPOG00000004268	npm1b	100	96.980	Acanthochromis_polyacanthus
ENSAOCG00000012549	npm1b	100	98.986	ENSAPEG00000000868	npm1b	100	98.986	Amphiprion_percula
ENSAOCG00000012549	npm1b	100	85.284	ENSATEG00000006254	npm1b	100	85.619	Anabas_testudineus
ENSAOCG00000012549	npm1b	95	44.330	ENSACAG00000015626	-	96	45.329	Anolis_carolinensis
ENSAOCG00000012549	npm1b	98	64.333	ENSAMXG00000042148	npm1b	99	65.000	Astyanax_mexicanus
ENSAOCG00000012549	npm1b	85	35.907	ENSCAFG00000023359	-	99	36.293	Canis_familiaris
ENSAOCG00000012549	npm1b	96	45.918	ENSCPBG00000021221	-	58	47.766	Chrysemys_picta_bellii
ENSAOCG00000012549	npm1b	100	78.859	ENSCSEG00000004530	npm1b	100	78.000	Cynoglossus_semilaevis
ENSAOCG00000012549	npm1b	100	76.589	ENSCVAG00000013016	npm1b	100	76.923	Cyprinodon_variegatus
ENSAOCG00000012549	npm1b	99	66.113	ENSDARG00000037675	npm1b	99	66.445	Danio_rerio
ENSAOCG00000012549	npm1b	99	64.052	ENSELUG00000022123	npm1b	99	64.052	Esox_lucius
ENSAOCG00000012549	npm1b	94	44.755	ENSFALG00000003320	-	94	45.804	Ficedula_albicollis
ENSAOCG00000012549	npm1b	100	76.080	ENSFHEG00000020794	npm1b	100	76.080	Fundulus_heteroclitus
ENSAOCG00000012549	npm1b	98	63.390	ENSGMOG00000002689	npm1b	100	64.527	Gadus_morhua
ENSAOCG00000012549	npm1b	98	44.551	ENSGALG00000002197	-	73	45.513	Gallus_gallus
ENSAOCG00000012549	npm1b	100	77.181	ENSGAFG00000017709	npm1b	100	77.517	Gambusia_affinis
ENSAOCG00000012549	npm1b	98	80.137	ENSGACG00000016706	npm1b	100	80.137	Gasterosteus_aculeatus
ENSAOCG00000012549	npm1b	95	45.361	ENSGAGG00000020250	-	96	46.735	Gopherus_agassizii
ENSAOCG00000012549	npm1b	100	78.595	ENSHBUG00000019903	npm1b	95	81.271	Haplochromis_burtoni
ENSAOCG00000012549	npm1b	100	77.027	ENSHCOG00000003895	npm1b	100	77.027	Hippocampus_comes
ENSAOCG00000012549	npm1b	99	63.123	ENSIPUG00000020165	npm1b	99	63.787	Ictalurus_punctatus
ENSAOCG00000012549	npm1b	99	80.546	ENSKMAG00000008260	npm1b	99	83.333	Kryptolebias_marmoratus
ENSAOCG00000012549	npm1b	64	86.243	ENSLBEG00000001304	-	94	86.243	Labrus_bergylta
ENSAOCG00000012549	npm1b	93	40.129	ENSLACG00000001779	-	100	41.892	Latimeria_chalumnae
ENSAOCG00000012549	npm1b	93	48.311	ENSLOCG00000001942	npm1b	100	49.495	Lepisosteus_oculatus
ENSAOCG00000012549	npm1b	72	80.822	ENSMAMG00000015335	npm1b	100	80.822	Mastacembelus_armatus
ENSAOCG00000012549	npm1b	93	44.138	ENSMGAG00000001591	-	100	45.172	Meleagris_gallopavo
ENSAOCG00000012549	npm1b	81	84.711	ENSMALG00000015383	npm1b	100	83.884	Monopterus_albus
ENSAOCG00000012549	npm1b	99	73.220	ENSONIG00000001397	npm1b	98	77.397	Oreochromis_niloticus
ENSAOCG00000012549	npm1b	100	66.216	ENSOMEG00000003414	npm1b	100	66.216	Oryzias_melastigma
ENSAOCG00000012549	npm1b	99	58.675	ENSPKIG00000020050	npm1b	99	58.991	Paramormyrops_kingsleyae
ENSAOCG00000012549	npm1b	96	45.918	ENSPSIG00000011204	-	92	46.207	Pelodiscus_sinensis
ENSAOCG00000012549	npm1b	93	37.241	ENSPMAG00000004930	npm1b	99	37.241	Petromyzon_marinus
ENSAOCG00000012549	npm1b	100	77.258	ENSPFOG00000018357	npm1b	100	77.258	Poecilia_formosa
ENSAOCG00000012549	npm1b	98	64.527	ENSPNAG00000005498	npm1b	99	65.203	Pygocentrus_nattereri
ENSAOCG00000012549	npm1b	99	57.770	ENSSFOG00015005064	npm1b	100	58.446	Scleropages_formosus
ENSAOCG00000012549	npm1b	100	84.122	ENSSMAG00000008088	npm1b	100	84.122	Scophthalmus_maximus
ENSAOCG00000012549	npm1b	100	86.913	ENSSDUG00000007726	npm1b	100	87.919	Seriola_dumerili
ENSAOCG00000012549	npm1b	100	87.248	ENSSLDG00000021396	npm1b	100	88.255	Seriola_lalandi_dorsalis
ENSAOCG00000012549	npm1b	100	92.593	ENSSPAG00000011152	npm1b	100	92.593	Stegastes_partitus
ENSAOCG00000012549	npm1b	93	44.912	ENSTGUG00000014970	-	100	44.912	Taeniopygia_guttata
ENSAOCG00000012549	npm1b	100	78.188	ENSTRUG00000008105	npm1b	95	77.852	Takifugu_rubripes
ENSAOCG00000012549	npm1b	99	74.832	ENSTNIG00000013057	npm1b	100	74.832	Tetraodon_nigroviridis
ENSAOCG00000012549	npm1b	98	43.711	ENSXETG00000008403	npm1	95	43.730	Xenopus_tropicalis
ENSAOCG00000012549	npm1b	100	77.258	ENSXMAG00000001986	npm1b	100	77.258	Xiphophorus_maculatus