EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAOCG00000012559 (Gene tree)
Gene ID: 111570501
Gene Symbol: RBM38
Alias: HSRNASEB|RNPC1|SEB4D|dJ800J21.2|seb4B
Full Name: RNA-binding protein 38-like
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Minus strand
Length: 10245 bases
Position: chrNXFZ01002452.1:3-10247
Accession: 111570501
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000025164	RRM_1	PF00076.22	2.5e-16	1	1
ENSAOCP00000008523	RRM_1	PF00076.22	2.9e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000000925	RBM38-201	687	-	ENSAOCP00000025164	229 (aa)	-	-
ENSAOCT00000000939	RBM38-202	967	XM_023273302	ENSAOCP00000008523	237 (aa)	XP_023129070	-

Gene Model

Click here to download ENSAOCG00000012559's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000012559's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAOCG00000012559	RBM38	68	71.429	ENSAOCG00000023764	rbm24b	99	60.924
ENSAOCG00000012559	RBM38	98	66.250	ENSAOCG00000013497	-	94	64.435
ENSAOCG00000012559	RBM38	60	78.102	ENSAOCG00000000378	rbm24a	99	61.373

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000012559	RBM38	99	63.525	ENSG00000132819	RBM38	94	86.441	Homo_sapiens
ENSAOCG00000012559	RBM38	98	65.833	ENSAPOG00000003301	rbm38	94	64.017	Acanthochromis_polyacanthus
ENSAOCG00000012559	RBM38	100	99.156	ENSAPOG00000009939	-	97	99.156	Acanthochromis_polyacanthus
ENSAOCG00000012559	RBM38	100	92.827	ENSACIG00000012502	-	100	97.458	Amphilophus_citrinellus
ENSAOCG00000012559	RBM38	98	65.417	ENSACIG00000000010	rbm38	95	65.000	Amphilophus_citrinellus
ENSAOCG00000012559	RBM38	98	68.085	ENSAPEG00000013137	rbm38	99	68.085	Amphiprion_percula
ENSAOCG00000012559	RBM38	100	99.578	ENSAPEG00000023581	-	97	99.578	Amphiprion_percula
ENSAOCG00000012559	RBM38	98	65.145	ENSATEG00000016366	rbm38	99	62.249	Anabas_testudineus
ENSAOCG00000012559	RBM38	100	95.781	ENSATEG00000016710	-	97	95.781	Anabas_testudineus
ENSAOCG00000012559	RBM38	94	66.960	ENSACAG00000016238	RBM38	97	62.447	Anolis_carolinensis
ENSAOCG00000012559	RBM38	90	67.873	ENSANAG00000031959	RBM38	100	79.675	Aotus_nancymaae
ENSAOCG00000012559	RBM38	100	90.295	ENSACLG00000019514	-	97	90.295	Astatotilapia_calliptera
ENSAOCG00000012559	RBM38	99	65.812	ENSAMXG00000038120	rbm38	97	61.966	Astyanax_mexicanus
ENSAOCG00000012559	RBM38	100	78.481	ENSAMXG00000015601	-	99	72.996	Astyanax_mexicanus
ENSAOCG00000012559	RBM38	99	64.609	ENSBTAG00000008105	RBM38	99	64.463	Bos_taurus
ENSAOCG00000012559	RBM38	50	65.385	WBGene00006321	sup-12	59	83.146	Caenorhabditis_elegans
ENSAOCG00000012559	RBM38	99	64.344	ENSCJAG00000019139	RBM38	100	79.675	Callithrix_jacchus
ENSAOCG00000012559	RBM38	99	65.021	ENSCAFG00020021943	RBM38	99	64.198	Canis_lupus_dingo
ENSAOCG00000012559	RBM38	99	63.115	ENSCHIG00000002609	RBM38	99	62.963	Capra_hircus
ENSAOCG00000012559	RBM38	99	63.115	ENSCPOG00000012781	RBM38	99	62.551	Cavia_porcellus
ENSAOCG00000012559	RBM38	99	64.344	ENSCCAG00000036872	RBM38	100	79.675	Cebus_capucinus
ENSAOCG00000012559	RBM38	99	65.289	ENSCATG00000032133	RBM38	100	79.675	Cercocebus_atys
ENSAOCG00000012559	RBM38	93	65.198	ENSCLAG00000005906	RBM38	96	64.159	Chinchilla_lanigera
ENSAOCG00000012559	RBM38	99	65.289	ENSCSAG00000015503	RBM38	99	64.730	Chlorocebus_sabaeus
ENSAOCG00000012559	RBM38	88	71.163	ENSCPBG00000024059	RBM38	98	68.224	Chrysemys_picta_bellii
ENSAOCG00000012559	RBM38	98	52.521	ENSCANG00000030105	-	89	50.840	Colobus_angolensis_palliatus
ENSAOCG00000012559	RBM38	93	65.198	ENSCGRG00001012928	Rbm38	93	66.372	Cricetulus_griseus_chok1gshd
ENSAOCG00000012559	RBM38	100	91.139	ENSCSEG00000004701	-	97	91.139	Cynoglossus_semilaevis
ENSAOCG00000012559	RBM38	84	62.564	ENSCSEG00000020943	rbm38	64	64.286	Cynoglossus_semilaevis
ENSAOCG00000012559	RBM38	100	89.030	ENSCVAG00000005472	-	97	89.030	Cyprinodon_variegatus
ENSAOCG00000012559	RBM38	99	61.411	ENSCVAG00000015952	rbm38	95	62.083	Cyprinodon_variegatus
ENSAOCG00000012559	RBM38	99	73.729	ENSDARG00000058818	rbm38	82	81.026	Danio_rerio
ENSAOCG00000012559	RBM38	90	70.892	ENSDNOG00000032004	RBM38	99	69.811	Dasypus_novemcinctus
ENSAOCG00000012559	RBM38	99	64.754	ENSECAG00000007700	RBM38	99	64.198	Equus_caballus
ENSAOCG00000012559	RBM38	99	63.934	ENSEEUG00000013489	RBM38	99	62.551	Erinaceus_europaeus
ENSAOCG00000012559	RBM38	92	68.142	ENSELUG00000000585	-	98	64.000	Esox_lucius
ENSAOCG00000012559	RBM38	100	82.231	ENSELUG00000005849	-	97	79.752	Esox_lucius
ENSAOCG00000012559	RBM38	99	64.198	ENSFCAG00000042916	RBM38	100	78.862	Felis_catus
ENSAOCG00000012559	RBM38	78	74.586	ENSFALG00000010805	RBM38	93	70.166	Ficedula_albicollis
ENSAOCG00000012559	RBM38	100	84.647	ENSFHEG00000006160	-	96	89.252	Fundulus_heteroclitus
ENSAOCG00000012559	RBM38	98	62.500	ENSFHEG00000017748	rbm38	95	61.667	Fundulus_heteroclitus
ENSAOCG00000012559	RBM38	80	88.108	ENSGMOG00000016655	-	99	85.946	Gadus_morhua
ENSAOCG00000012559	RBM38	88	70.233	ENSGALG00000026081	RBM38	98	68.692	Gallus_gallus
ENSAOCG00000012559	RBM38	90	71.090	ENSGACG00000015224	rbm38	99	70.142	Gasterosteus_aculeatus
ENSAOCG00000012559	RBM38	95	86.161	ENSGACG00000009873	-	100	87.558	Gasterosteus_aculeatus
ENSAOCG00000012559	RBM38	88	70.698	ENSGAGG00000001187	RBM38	98	68.224	Gopherus_agassizii
ENSAOCG00000012559	RBM38	100	90.295	ENSHBUG00000011778	-	97	90.295	Haplochromis_burtoni
ENSAOCG00000012559	RBM38	98	65.021	ENSHBUG00000012058	rbm38	95	64.583	Haplochromis_burtoni
ENSAOCG00000012559	RBM38	99	59.259	ENSHGLG00000015077	RBM38	99	61.317	Heterocephalus_glaber_female
ENSAOCG00000012559	RBM38	93	51.709	ENSHCOG00000019040	rbm38	79	55.556	Hippocampus_comes
ENSAOCG00000012559	RBM38	87	91.304	ENSHCOG00000005622	-	57	91.919	Hippocampus_comes
ENSAOCG00000012559	RBM38	100	72.500	ENSIPUG00000019349	-	97	70.833	Ictalurus_punctatus
ENSAOCG00000012559	RBM38	91	60.444	ENSKMAG00000012402	rbm38	98	58.009	Kryptolebias_marmoratus
ENSAOCG00000012559	RBM38	98	66.667	ENSLBEG00000018878	rbm38	95	65.417	Labrus_bergylta
ENSAOCG00000012559	RBM38	100	92.116	ENSLBEG00000016163	RBM38	97	92.116	Labrus_bergylta
ENSAOCG00000012559	RBM38	99	75.424	ENSLOCG00000003456	rbm38	97	73.729	Lepisosteus_oculatus
ENSAOCG00000012559	RBM38	97	66.387	ENSMFAG00000043808	RBM38	97	82.353	Macaca_fascicularis
ENSAOCG00000012559	RBM38	99	65.289	ENSMMUG00000031391	RBM38	100	79.675	Macaca_mulatta
ENSAOCG00000012559	RBM38	99	65.289	ENSMNEG00000034683	RBM38	100	79.675	Macaca_nemestrina
ENSAOCG00000012559	RBM38	99	94.915	ENSMAMG00000020499	RBM38	97	95.319	Mastacembelus_armatus
ENSAOCG00000012559	RBM38	98	67.901	ENSMAMG00000024135	rbm38	94	64.583	Mastacembelus_armatus
ENSAOCG00000012559	RBM38	100	90.295	ENSMZEG00005000849	-	97	90.295	Maylandia_zebra
ENSAOCG00000012559	RBM38	98	65.021	ENSMZEG00005026036	rbm38	95	64.583	Maylandia_zebra
ENSAOCG00000012559	RBM38	93	66.960	ENSMAUG00000021211	Rbm38	93	67.257	Mesocricetus_auratus
ENSAOCG00000012559	RBM38	90	69.231	ENSMICG00000038011	RBM38	99	68.182	Microcebus_murinus
ENSAOCG00000012559	RBM38	93	65.801	ENSMOCG00000008715	Rbm38	95	66.087	Microtus_ochrogaster
ENSAOCG00000012559	RBM38	100	94.093	ENSMMOG00000020051	-	97	94.093	Mola_mola
ENSAOCG00000012559	RBM38	99	64.167	ENSMODG00000016458	RBM38	99	63.598	Monodelphis_domestica
ENSAOCG00000012559	RBM38	69	75.625	ENSMALG00000022327	rbm38	71	72.892	Monopterus_albus
ENSAOCG00000012559	RBM38	81	95.699	ENSMALG00000004680	RBM38	72	95.767	Monopterus_albus
ENSAOCG00000012559	RBM38	93	61.739	MGP_CAROLIEiJ_G0024745	Rbm38	95	63.913	Mus_caroli
ENSAOCG00000012559	RBM38	93	61.739	ENSMUSG00000027510	Rbm38	95	63.913	Mus_musculus
ENSAOCG00000012559	RBM38	93	61.472	MGP_PahariEiJ_G0026186	Rbm38	95	63.636	Mus_pahari
ENSAOCG00000012559	RBM38	93	61.739	MGP_SPRETEiJ_G0025665	Rbm38	95	63.913	Mus_spretus
ENSAOCG00000012559	RBM38	79	73.404	ENSMPUG00000006518	RBM38	96	70.558	Mustela_putorius_furo
ENSAOCG00000012559	RBM38	94	63.755	ENSMLUG00000011140	RBM38	99	65.909	Myotis_lucifugus
ENSAOCG00000012559	RBM38	98	65.432	ENSNBRG00000022685	rbm38	95	65.000	Neolamprologus_brichardi
ENSAOCG00000012559	RBM38	100	90.717	ENSNBRG00000022545	-	97	90.717	Neolamprologus_brichardi
ENSAOCG00000012559	RBM38	60	70.073	ENSMEUG00000005475	-	100	70.073	Notamacropus_eugenii
ENSAOCG00000012559	RBM38	99	63.525	ENSODEG00000007980	RBM38	99	62.963	Octodon_degus
ENSAOCG00000012559	RBM38	98	65.432	ENSONIG00000017073	rbm38	97	65.000	Oreochromis_niloticus
ENSAOCG00000012559	RBM38	100	90.717	ENSONIG00000020324	-	98	90.717	Oreochromis_niloticus
ENSAOCG00000012559	RBM38	91	66.364	ENSOANG00000009259	RBM38	81	67.464	Ornithorhynchus_anatinus
ENSAOCG00000012559	RBM38	100	86.611	ENSORLG00000027180	-	97	87.866	Oryzias_latipes
ENSAOCG00000012559	RBM38	99	59.091	ENSORLG00000012154	rbm38	96	58.607	Oryzias_latipes
ENSAOCG00000012559	RBM38	99	60.000	ENSORLG00020017871	rbm38	96	59.426	Oryzias_latipes_hni
ENSAOCG00000012559	RBM38	100	86.611	ENSORLG00020020751	-	97	87.866	Oryzias_latipes_hni
ENSAOCG00000012559	RBM38	99	60.905	ENSORLG00015012606	rbm38	96	59.426	Oryzias_latipes_hsok
ENSAOCG00000012559	RBM38	100	88.235	ENSORLG00015017040	-	97	88.235	Oryzias_latipes_hsok
ENSAOCG00000012559	RBM38	100	90.717	ENSOMEG00000023912	-	97	90.717	Oryzias_melastigma
ENSAOCG00000012559	RBM38	99	61.224	ENSOMEG00000006805	rbm38	96	60.656	Oryzias_melastigma
ENSAOCG00000012559	RBM38	99	63.265	ENSOGAG00000029136	RBM38	99	62.705	Otolemur_garnettii
ENSAOCG00000012559	RBM38	99	64.198	ENSPPRG00000009507	RBM38	100	78.862	Panthera_pardus
ENSAOCG00000012559	RBM38	79	73.404	ENSPTRG00000013661	RBM38	100	79.675	Pan_troglodytes
ENSAOCG00000012559	RBM38	55	84.127	ENSPTRG00000045845	-	68	84.127	Pan_troglodytes
ENSAOCG00000012559	RBM38	90	55.963	ENSPANG00000033127	-	93	55.300	Papio_anubis
ENSAOCG00000012559	RBM38	99	65.289	ENSPANG00000020919	-	100	79.675	Papio_anubis
ENSAOCG00000012559	RBM38	99	71.849	ENSPKIG00000018122	-	95	90.090	Paramormyrops_kingsleyae
ENSAOCG00000012559	RBM38	99	70.539	ENSPKIG00000025417	rbm38	97	70.124	Paramormyrops_kingsleyae
ENSAOCG00000012559	RBM38	93	67.982	ENSPSIG00000011649	RBM38	95	65.639	Pelodiscus_sinensis
ENSAOCG00000012559	RBM38	100	83.402	ENSPMGG00000017094	-	97	83.402	Periophthalmus_magnuspinnatus
ENSAOCG00000012559	RBM38	99	64.609	ENSPMGG00000011343	rbm38	95	63.445	Periophthalmus_magnuspinnatus
ENSAOCG00000012559	RBM38	99	65.000	ENSPCIG00000013648	RBM38	99	63.180	Phascolarctos_cinereus
ENSAOCG00000012559	RBM38	86	65.049	ENSPFOG00000011658	rbm38	95	60.494	Poecilia_formosa
ENSAOCG00000012559	RBM38	100	87.448	ENSPLAG00000002500	-	97	84.100	Poecilia_latipinna
ENSAOCG00000012559	RBM38	86	65.700	ENSPLAG00000005218	rbm38	95	60.494	Poecilia_latipinna
ENSAOCG00000012559	RBM38	98	59.504	ENSPMEG00000015770	rbm38	95	60.494	Poecilia_mexicana
ENSAOCG00000012559	RBM38	86	65.049	ENSPREG00000007398	rbm38	95	60.494	Poecilia_reticulata
ENSAOCG00000012559	RBM38	99	63.673	ENSPCOG00000026201	RBM38	100	78.226	Propithecus_coquereli
ENSAOCG00000012559	RBM38	99	43.802	ENSPVAG00000006457	RBM38	99	41.870	Pteropus_vampyrus
ENSAOCG00000012559	RBM38	100	90.295	ENSPNYG00000019727	-	100	96.610	Pundamilia_nyererei
ENSAOCG00000012559	RBM38	98	64.609	ENSPNYG00000021373	rbm38	95	64.167	Pundamilia_nyererei
ENSAOCG00000012559	RBM38	99	70.638	ENSPNAG00000010596	rbm38	82	77.551	Pygocentrus_nattereri
ENSAOCG00000012559	RBM38	100	77.637	ENSPNAG00000015123	-	98	82.836	Pygocentrus_nattereri
ENSAOCG00000012559	RBM38	93	64.935	ENSRNOG00000006420	Rbm38	95	64.348	Rattus_norvegicus
ENSAOCG00000012559	RBM38	99	54.393	ENSRROG00000036388	-	98	54.737	Rhinopithecus_roxellana
ENSAOCG00000012559	RBM38	90	67.873	ENSSBOG00000031053	RBM38	97	87.736	Saimiri_boliviensis_boliviensis
ENSAOCG00000012559	RBM38	99	70.833	ENSSFOG00015004453	rbm38	97	73.222	Scleropages_formosus
ENSAOCG00000012559	RBM38	98	67.500	ENSSDUG00000022611	rbm38	95	67.500	Seriola_dumerili
ENSAOCG00000012559	RBM38	100	96.624	ENSSDUG00000021082	RBM38	97	96.624	Seriola_dumerili
ENSAOCG00000012559	RBM38	98	67.500	ENSSLDG00000010845	rbm38	93	70.968	Seriola_lalandi_dorsalis
ENSAOCG00000012559	RBM38	100	96.624	ENSSLDG00000011778	RBM38	97	96.624	Seriola_lalandi_dorsalis
ENSAOCG00000012559	RBM38	98	65.975	ENSSPAG00000011113	rbm38	94	64.583	Stegastes_partitus
ENSAOCG00000012559	RBM38	100	98.734	ENSSPAG00000020989	RBM38	97	98.734	Stegastes_partitus
ENSAOCG00000012559	RBM38	99	64.754	ENSSSCG00000007504	RBM38	99	63.636	Sus_scrofa
ENSAOCG00000012559	RBM38	100	89.076	ENSTRUG00000019869	-	97	89.076	Takifugu_rubripes
ENSAOCG00000012559	RBM38	96	66.239	ENSTRUG00000024954	rbm38	93	65.385	Takifugu_rubripes
ENSAOCG00000012559	RBM38	95	86.161	ENSTNIG00000007093	-	99	85.909	Tetraodon_nigroviridis
ENSAOCG00000012559	RBM38	99	64.754	ENSUAMG00000019780	RBM38	99	63.934	Ursus_americanus
ENSAOCG00000012559	RBM38	99	65.021	ENSVVUG00000017246	RBM38	99	64.198	Vulpes_vulpes
ENSAOCG00000012559	RBM38	88	64.384	ENSXETG00000011268	rbm38	97	64.220	Xenopus_tropicalis
ENSAOCG00000012559	RBM38	73	76.536	ENSXCOG00000017324	-	62	90.441	Xiphophorus_couchianus
ENSAOCG00000012559	RBM38	86	66.995	ENSXMAG00000023662	rbm38	95	62.083	Xiphophorus_maculatus