EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAOCG00000012675 (Gene tree)
Gene ID: 111567644
Gene Symbol: prpf38b
Alias: wu:fc43b05|zgc:63496
Full Name: pre-mRNA-splicing factor 38B-like
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Plus strand
Length: 8133 bases
Position: chrNXFZ01002100.1:113627-121759
Accession: 111567644
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000008639	PRP38	PF03371.15	1.1e-54	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000000734	-	1766	XM_023268899	ENSAOCP00000008639	513 (aa)	XP_023124667	-

Gene Model

Click here to download ENSAOCG00000012675's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000012675's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000012675	prpf38b	91	98.721	ENSAPOG00000005297	prpf38b	100	98.721	Acanthochromis_polyacanthus
ENSAOCG00000012675	prpf38b	91	98.721	ENSAPOG00000012791	-	100	98.721	Acanthochromis_polyacanthus
ENSAOCG00000012675	prpf38b	100	99.610	ENSAPEG00000010974	prpf38b	100	99.610	Amphiprion_percula
ENSAOCG00000012675	prpf38b	89	91.721	ENSACLG00000001712	prpf38b	62	94.444	Astatotilapia_calliptera
ENSAOCG00000012675	prpf38b	89	68.902	ENSDARG00000053101	prpf38b	95	89.634	Danio_rerio
ENSAOCG00000012675	prpf38b	91	85.288	ENSFHEG00000002861	prpf38b	62	93.056	Fundulus_heteroclitus
ENSAOCG00000012675	prpf38b	91	83.579	ENSGACG00000015154	prpf38b	70	92.042	Gasterosteus_aculeatus
ENSAOCG00000012675	prpf38b	89	90.850	ENSHBUG00000022496	prpf38b	62	94.444	Haplochromis_burtoni
ENSAOCG00000012675	prpf38b	85	65.302	ENSIPUG00000014942	prpf38b	58	82.014	Ictalurus_punctatus
ENSAOCG00000012675	prpf38b	92	85.775	ENSLBEG00000024500	prpf38b	89	96.341	Labrus_bergylta
ENSAOCG00000012675	prpf38b	91	92.144	ENSMAMG00000010641	prpf38b	100	91.083	Mastacembelus_armatus
ENSAOCG00000012675	prpf38b	89	91.721	ENSMZEG00005025536	prpf38b	62	94.444	Maylandia_zebra
ENSAOCG00000012675	prpf38b	89	90.850	ENSPNYG00000007625	prpf38b	62	94.444	Pundamilia_nyererei
ENSAOCG00000012675	prpf38b	91	97.228	ENSSPAG00000023160	-	100	97.228	Stegastes_partitus