EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAOCG00000012921 (Gene tree)
Gene ID: 111575781
Gene Symbol: rab42a
Alias: wu:fk59e12|zgc:73061
Full Name: ras-related protein Rab-39B-like
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Plus strand
Length: 6817 bases
Position: chrNXFZ01003091.1:278551-285367
Accession: 111575781
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000025403	MMR_HSR1	PF01926.23	0.00011	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000000330	-	4536	XM_023281116	ENSAOCP00000025403	262 (aa)	XP_023136884	-

Gene Model

Click here to download ENSAOCG00000012921's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000012921's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAOCG00000012921	rab42a	72	46.809	ENSAOCG00000014658	rab2a	89	46.316
ENSAOCG00000012921	rab42a	60	39.873	ENSAOCG00000009167	-	67	39.873
ENSAOCG00000012921	rab42a	60	39.490	ENSAOCG00000022426	RAB41	73	39.490
ENSAOCG00000012921	rab42a	63	34.756	ENSAOCG00000001554	rab22a	84	34.756
ENSAOCG00000012921	rab42a	80	37.559	ENSAOCG00000002532	RAB15	78	41.667
ENSAOCG00000012921	rab42a	70	40.984	ENSAOCG00000018849	-	83	40.984
ENSAOCG00000012921	rab42a	83	55.046	ENSAOCG00000007928	RAB39B	93	58.794
ENSAOCG00000012921	rab42a	63	39.286	ENSAOCG00000011596	RAB9A	83	39.286
ENSAOCG00000012921	rab42a	70	42.623	ENSAOCG00000018050	rab11ba	83	42.623
ENSAOCG00000012921	rab42a	70	40.437	ENSAOCG00000015713	rab25b	86	41.111
ENSAOCG00000012921	rab42a	61	41.358	ENSAOCG00000024675	zgc:101559	69	41.358
ENSAOCG00000012921	rab42a	63	43.293	ENSAOCG00000005934	rab35b	80	43.293
ENSAOCG00000012921	rab42a	63	31.515	ENSAOCG00000007510	rhebl1	87	31.515
ENSAOCG00000012921	rab42a	65	34.682	ENSAOCG00000007106	rab34b	63	34.682
ENSAOCG00000012921	rab42a	61	36.025	ENSAOCG00000018241	rab36	63	35.294
ENSAOCG00000012921	rab42a	70	37.968	ENSAOCG00000013808	-	92	47.107
ENSAOCG00000012921	rab42a	68	30.208	ENSAOCG00000007065	rasl11a	72	30.208
ENSAOCG00000012921	rab42a	60	39.490	ENSAOCG00000012277	-	75	39.490
ENSAOCG00000012921	rab42a	70	41.530	ENSAOCG00000015678	rab11al	85	41.808
ENSAOCG00000012921	rab42a	60	34.177	ENSAOCG00000004234	rab23	74	34.641
ENSAOCG00000012921	rab42a	67	41.714	ENSAOCG00000016825	si:dkey-16l2.16	82	41.714
ENSAOCG00000012921	rab42a	75	31.188	ENSAOCG00000018544	rab34a	65	32.948
ENSAOCG00000012921	rab42a	65	41.420	ENSAOCG00000015908	-	84	41.420
ENSAOCG00000012921	rab42a	68	41.011	ENSAOCG00000003965	rab1ba	91	40.217
ENSAOCG00000012921	rab42a	60	38.217	ENSAOCG00000011103	rab6bb	75	38.217
ENSAOCG00000012921	rab42a	62	35.802	ENSAOCG00000000090	rab5aa	74	35.802
ENSAOCG00000012921	rab42a	65	34.706	ENSAOCG00000012766	rras	85	34.706
ENSAOCG00000012921	rab42a	63	39.286	ENSAOCG00000020020	-	76	39.286
ENSAOCG00000012921	rab42a	70	33.333	ENSAOCG00000010265	rheb	92	33.333
ENSAOCG00000012921	rab42a	70	40.984	ENSAOCG00000020106	rab11a	84	40.984
ENSAOCG00000012921	rab42a	63	36.585	ENSAOCG00000016614	rab5c	74	36.585
ENSAOCG00000012921	rab42a	56	42.105	ENSAOCG00000005301	-	62	42.105
ENSAOCG00000012921	rab42a	63	37.647	ENSAOCG00000013441	rab9a	82	37.647
ENSAOCG00000012921	rab42a	58	44.737	ENSAOCG00000005790	rab33ba	61	44.737
ENSAOCG00000012921	rab42a	80	37.850	ENSAOCG00000005797	rab15	78	42.262
ENSAOCG00000012921	rab42a	63	40.000	ENSAOCG00000016233	rab18a	80	40.000
ENSAOCG00000012921	rab42a	68	42.135	ENSAOCG00000020606	-	87	42.135
ENSAOCG00000012921	rab42a	82	37.850	ENSAOCG00000018191	-	97	38.318
ENSAOCG00000012921	rab42a	60	38.994	ENSAOCG00000020491	si:dkey-13a21.4	77	38.994
ENSAOCG00000012921	rab42a	68	42.135	ENSAOCG00000006385	rab1ab	87	42.135
ENSAOCG00000012921	rab42a	58	36.842	ENSAOCG00000017207	si:ch73-116o1.2	78	36.585
ENSAOCG00000012921	rab42a	81	33.175	ENSAOCG00000002298	rab6ba	75	38.217
ENSAOCG00000012921	rab42a	64	44.048	ENSAOCG00000003528	rab25a	79	44.048
ENSAOCG00000012921	rab42a	63	30.120	ENSAOCG00000008069	rabl2	71	30.120
ENSAOCG00000012921	rab42a	62	34.337	ENSAOCG00000005772	RAB7A	79	34.337
ENSAOCG00000012921	rab42a	63	35.542	ENSAOCG00000002921	rras2	81	35.542
ENSAOCG00000012921	rab42a	58	33.775	ENSAOCG00000017428	kras	91	32.022
ENSAOCG00000012921	rab42a	72	42.328	ENSAOCG00000024149	-	87	42.328
ENSAOCG00000012921	rab42a	73	38.743	ENSAOCG00000002130	rab12	76	38.743
ENSAOCG00000012921	rab42a	64	38.728	ENSAOCG00000007448	rab33a	62	38.728
ENSAOCG00000012921	rab42a	63	31.325	ENSAOCG00000010160	si:cabz01085950.1	82	31.325
ENSAOCG00000012921	rab42a	58	33.775	ENSAOCG00000011843	hrasb	85	32.927
ENSAOCG00000012921	rab42a	62	34.337	ENSAOCG00000008820	-	79	34.337
ENSAOCG00000012921	rab42a	69	41.111	ENSAOCG00000012556	rab30	63	41.111
ENSAOCG00000012921	rab42a	58	49.342	ENSAOCG00000015948	-	72	49.342
ENSAOCG00000012921	rab42a	70	40.984	ENSAOCG00000018239	rab11bb	83	40.984
ENSAOCG00000012921	rab42a	63	41.212	ENSAOCG00000013479	rab18b	80	41.212
ENSAOCG00000012921	rab42a	63	38.095	ENSAOCG00000022810	rab9b	82	38.095
ENSAOCG00000012921	rab42a	82	37.850	ENSAOCG00000008492	rab14	97	37.850

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000012921	rab42a	83	98.165	ENSAPOG00000009188	rab42a	100	98.165	Acanthochromis_polyacanthus
ENSAOCG00000012921	rab42a	83	96.789	ENSACIG00000003102	rab42a	100	96.789	Amphilophus_citrinellus
ENSAOCG00000012921	rab42a	100	100.000	ENSAPEG00000007713	rab42a	100	100.000	Amphiprion_percula
ENSAOCG00000012921	rab42a	83	95.872	ENSATEG00000009052	rab42a	100	95.872	Anabas_testudineus
ENSAOCG00000012921	rab42a	83	96.330	ENSACLG00000007514	rab42a	100	95.872	Astatotilapia_calliptera
ENSAOCG00000012921	rab42a	83	90.826	ENSAMXG00000032729	rab42a	100	89.450	Astyanax_mexicanus
ENSAOCG00000012921	rab42a	83	93.119	ENSCSEG00000010582	rab42a	100	93.119	Cynoglossus_semilaevis
ENSAOCG00000012921	rab42a	83	47.032	ENSDARG00000102580	CU571310.1	93	49.746	Danio_rerio
ENSAOCG00000012921	rab42a	83	90.367	ENSDARG00000034215	rab42a	100	88.991	Danio_rerio
ENSAOCG00000012921	rab42a	83	89.450	ENSELUG00000010345	rab42a	100	89.450	Esox_lucius
ENSAOCG00000012921	rab42a	83	97.706	ENSFHEG00000013106	rab42a	100	97.706	Fundulus_heteroclitus
ENSAOCG00000012921	rab42a	83	95.872	ENSGAFG00000002141	rab42a	100	95.872	Gambusia_affinis
ENSAOCG00000012921	rab42a	94	94.737	ENSHBUG00000015126	rab42a	89	94.915	Haplochromis_burtoni
ENSAOCG00000012921	rab42a	83	87.615	ENSIPUG00000011376	rab42a	100	86.239	Ictalurus_punctatus
ENSAOCG00000012921	rab42a	83	95.872	ENSKMAG00000007267	rab42a	100	95.872	Kryptolebias_marmoratus
ENSAOCG00000012921	rab42a	83	96.789	ENSLBEG00000001193	rab42a	100	96.789	Labrus_bergylta
ENSAOCG00000012921	rab42a	83	63.761	ENSLACG00000012755	-	94	68.000	Latimeria_chalumnae
ENSAOCG00000012921	rab42a	83	51.142	ENSLOCG00000015825	-	99	51.142	Lepisosteus_oculatus
ENSAOCG00000012921	rab42a	83	83.028	ENSLOCG00000003453	rab42a	94	87.500	Lepisosteus_oculatus
ENSAOCG00000012921	rab42a	83	97.248	ENSMAMG00000002296	rab42a	100	97.248	Mastacembelus_armatus
ENSAOCG00000012921	rab42a	94	94.737	ENSMZEG00005012460	rab42a	89	94.915	Maylandia_zebra
ENSAOCG00000012921	rab42a	83	92.661	ENSMMOG00000014358	rab42a	100	92.661	Mola_mola
ENSAOCG00000012921	rab42a	95	93.281	ENSNBRG00000021487	rab42a	89	95.339	Neolamprologus_brichardi
ENSAOCG00000012921	rab42a	83	95.413	ENSORLG00000022335	rab42a	100	95.413	Oryzias_latipes
ENSAOCG00000012921	rab42a	83	95.413	ENSORLG00020013895	rab42a	100	95.413	Oryzias_latipes_hni
ENSAOCG00000012921	rab42a	83	95.413	ENSORLG00015004273	rab42a	100	95.413	Oryzias_latipes_hsok
ENSAOCG00000012921	rab42a	83	95.413	ENSOMEG00000020418	rab42a	100	95.413	Oryzias_melastigma
ENSAOCG00000012921	rab42a	83	77.982	ENSPKIG00000021215	-	93	82.412	Paramormyrops_kingsleyae
ENSAOCG00000012921	rab42a	74	49.485	ENSPKIG00000015234	-	93	49.485	Paramormyrops_kingsleyae
ENSAOCG00000012921	rab42a	75	96.447	ENSPMGG00000024112	rab42a	90	96.447	Periophthalmus_magnuspinnatus
ENSAOCG00000012921	rab42a	97	86.770	ENSPFOG00000004838	rab42a	84	95.495	Poecilia_formosa
ENSAOCG00000012921	rab42a	83	95.413	ENSPLAG00000005628	rab42a	100	95.413	Poecilia_latipinna
ENSAOCG00000012921	rab42a	83	95.413	ENSPMEG00000019497	rab42a	100	95.413	Poecilia_mexicana
ENSAOCG00000012921	rab42a	83	95.872	ENSPREG00000013962	rab42a	100	95.872	Poecilia_reticulata
ENSAOCG00000012921	rab42a	94	94.737	ENSPNYG00000010325	rab42a	89	94.915	Pundamilia_nyererei
ENSAOCG00000012921	rab42a	83	90.367	ENSPNAG00000016567	rab42a	100	88.991	Pygocentrus_nattereri
ENSAOCG00000012921	rab42a	83	85.321	ENSSFOG00015020732	rab42a	100	84.862	Scleropages_formosus
ENSAOCG00000012921	rab42a	83	46.119	ENSSFOG00015016000	-	97	46.119	Scleropages_formosus
ENSAOCG00000012921	rab42a	83	93.578	ENSSMAG00000020311	rab42a	100	93.578	Scophthalmus_maximus
ENSAOCG00000012921	rab42a	83	96.330	ENSSDUG00000011851	rab42a	100	96.330	Seriola_dumerili
ENSAOCG00000012921	rab42a	83	96.330	ENSSLDG00000020354	rab42a	100	96.330	Seriola_lalandi_dorsalis
ENSAOCG00000012921	rab42a	83	98.165	ENSSPAG00000016167	rab42a	100	98.165	Stegastes_partitus
ENSAOCG00000012921	rab42a	83	95.872	ENSTRUG00000010224	rab42a	100	95.872	Takifugu_rubripes
ENSAOCG00000012921	rab42a	83	96.330	ENSXCOG00000003428	rab42a	100	96.330	Xiphophorus_couchianus
ENSAOCG00000012921	rab42a	83	96.330	ENSXMAG00000028376	rab42a	100	96.330	Xiphophorus_maculatus