EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAOCG00000012988 (Gene tree)
Gene ID: 111574212
Gene Symbol: prpf6
Alias: c20orf14|fc12b02|wu:fa05f07|wu:fc12b02|zgc:65913
Full Name: pre-mRNA processing factor 6
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Minus strand
Length: 17334 bases
Position: chrNXFZ01002967.1:173105-190438
Accession: 111574212
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000008883	PRP1_N	PF06424.12	1.7e-57	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000000304	-	4777	XM_023278666	ENSAOCP00000008883	969 (aa)	XP_023134434	UPI000C314A2A

Gene Model

Click here to download ENSAOCG00000012988's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000012988's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000012988	prpf6	96	92.667	ENSG00000101161	PRPF6	100	92.242	Homo_sapiens
ENSAOCG00000012988	prpf6	100	99.897	ENSAPOG00000010395	prpf6	100	99.897	Acanthochromis_polyacanthus
ENSAOCG00000012988	prpf6	96	92.038	ENSAMEG00000001916	PRPF6	99	91.614	Ailuropoda_melanoleuca
ENSAOCG00000012988	prpf6	100	98.452	ENSACIG00000019862	prpf6	100	98.452	Amphilophus_citrinellus
ENSAOCG00000012988	prpf6	96	92.688	ENSAPEG00000008301	prpf6	100	92.903	Amphiprion_percula
ENSAOCG00000012988	prpf6	100	98.658	ENSATEG00000005581	prpf6	100	98.658	Anabas_testudineus
ENSAOCG00000012988	prpf6	96	92.880	ENSACAG00000006464	PRPF6	95	92.455	Anolis_carolinensis
ENSAOCG00000012988	prpf6	96	92.667	ENSANAG00000012661	PRPF6	100	93.168	Aotus_nancymaae
ENSAOCG00000012988	prpf6	100	98.246	ENSACLG00000025875	prpf6	100	98.246	Astatotilapia_calliptera
ENSAOCG00000012988	prpf6	97	94.703	ENSAMXG00000001929	prpf6	100	93.135	Astyanax_mexicanus
ENSAOCG00000012988	prpf6	96	92.986	ENSBTAG00000011656	PRPF6	100	92.561	Bos_taurus
ENSAOCG00000012988	prpf6	96	92.667	ENSCJAG00000010616	PRPF6	100	92.242	Callithrix_jacchus
ENSAOCG00000012988	prpf6	96	93.092	ENSCAFG00000013165	PRPF6	100	92.667	Canis_familiaris
ENSAOCG00000012988	prpf6	96	93.092	ENSCAFG00020002050	PRPF6	100	92.667	Canis_lupus_dingo
ENSAOCG00000012988	prpf6	96	92.986	ENSCHIG00000018187	PRPF6	100	92.561	Capra_hircus
ENSAOCG00000012988	prpf6	96	93.092	ENSTSYG00000007814	PRPF6	100	92.667	Carlito_syrichta
ENSAOCG00000012988	prpf6	93	92.257	ENSCAPG00000015077	PRPF6	100	91.385	Cavia_aperea
ENSAOCG00000012988	prpf6	96	93.518	ENSCPOG00000007518	PRPF6	100	93.092	Cavia_porcellus
ENSAOCG00000012988	prpf6	96	89.586	ENSCCAG00000024564	PRPF6	100	89.160	Cebus_capucinus
ENSAOCG00000012988	prpf6	96	92.774	ENSCATG00000037473	PRPF6	100	92.349	Cercocebus_atys
ENSAOCG00000012988	prpf6	96	89.692	ENSCLAG00000003854	PRPF6	100	89.267	Chinchilla_lanigera
ENSAOCG00000012988	prpf6	96	87.962	ENSCSAG00000016742	PRPF6	100	87.540	Chlorocebus_sabaeus
ENSAOCG00000012988	prpf6	81	78.211	ENSCHOG00000003315	-	98	78.017	Choloepus_hoffmanni
ENSAOCG00000012988	prpf6	98	92.092	ENSCPBG00000013964	PRPF6	96	93.085	Chrysemys_picta_bellii
ENSAOCG00000012988	prpf6	96	72.727	ENSCING00000008817	-	99	72.304	Ciona_intestinalis
ENSAOCG00000012988	prpf6	96	92.561	ENSCANG00000038230	PRPF6	100	92.136	Colobus_angolensis_palliatus
ENSAOCG00000012988	prpf6	96	93.518	ENSCGRG00001022666	Prpf6	100	93.092	Cricetulus_griseus_chok1gshd
ENSAOCG00000012988	prpf6	96	92.688	ENSCSEG00000018561	prpf6	100	92.688	Cynoglossus_semilaevis
ENSAOCG00000012988	prpf6	100	97.317	ENSCVAG00000010550	prpf6	100	97.317	Cyprinodon_variegatus
ENSAOCG00000012988	prpf6	100	93.443	ENSDARG00000091367	prpf6	100	94.597	Danio_rerio
ENSAOCG00000012988	prpf6	96	92.667	ENSDNOG00000040544	PRPF6	100	92.349	Dasypus_novemcinctus
ENSAOCG00000012988	prpf6	87	92.991	ENSDORG00000005406	Prpf6	100	92.991	Dipodomys_ordii
ENSAOCG00000012988	prpf6	96	71.505	FBgn0036828	CG6841	99	71.613	Drosophila_melanogaster
ENSAOCG00000012988	prpf6	83	91.959	ENSETEG00000004447	PRPF6	85	91.959	Echinops_telfairi
ENSAOCG00000012988	prpf6	96	86.138	ENSEBUG00000008835	prpf6	100	85.714	Eptatretus_burgeri
ENSAOCG00000012988	prpf6	99	90.918	ENSEASG00005023115	PRPF6	100	92.774	Equus_asinus_asinus
ENSAOCG00000012988	prpf6	96	88.948	ENSECAG00000013983	PRPF6	100	88.523	Equus_caballus
ENSAOCG00000012988	prpf6	86	95.833	ENSEEUG00000000180	PRPF6	81	95.833	Erinaceus_europaeus
ENSAOCG00000012988	prpf6	97	95.652	ENSELUG00000001945	prpf6	94	95.652	Esox_lucius
ENSAOCG00000012988	prpf6	96	93.092	ENSFCAG00000001183	PRPF6	100	92.667	Felis_catus
ENSAOCG00000012988	prpf6	98	85.021	ENSFALG00000006046	-	97	86.980	Ficedula_albicollis
ENSAOCG00000012988	prpf6	96	92.910	ENSFALG00000010326	-	98	92.593	Ficedula_albicollis
ENSAOCG00000012988	prpf6	96	92.030	ENSFDAG00000006451	PRPF6	100	92.744	Fukomys_damarensis
ENSAOCG00000012988	prpf6	99	97.622	ENSFHEG00000000560	prpf6	99	97.622	Fundulus_heteroclitus
ENSAOCG00000012988	prpf6	97	94.486	ENSGMOG00000015622	prpf6	99	93.955	Gadus_morhua
ENSAOCG00000012988	prpf6	96	92.986	ENSGALG00000006001	PRPF6	100	92.667	Gallus_gallus
ENSAOCG00000012988	prpf6	100	92.982	ENSGAFG00000021109	prpf6	100	92.982	Gambusia_affinis
ENSAOCG00000012988	prpf6	97	96.610	ENSGACG00000002576	prpf6	100	96.610	Gasterosteus_aculeatus
ENSAOCG00000012988	prpf6	98	92.188	ENSGAGG00000008653	PRPF6	96	93.191	Gopherus_agassizii
ENSAOCG00000012988	prpf6	96	92.667	ENSGGOG00000016876	PRPF6	100	92.242	Gorilla_gorilla
ENSAOCG00000012988	prpf6	100	98.246	ENSHBUG00000004496	prpf6	100	98.246	Haplochromis_burtoni
ENSAOCG00000012988	prpf6	96	93.411	ENSHGLG00000009222	PRPF6	100	92.986	Heterocephalus_glaber_female
ENSAOCG00000012988	prpf6	93	93.348	ENSHGLG00100016600	PRPF6	100	92.912	Heterocephalus_glaber_male
ENSAOCG00000012988	prpf6	100	96.594	ENSHCOG00000011513	prpf6	100	96.594	Hippocampus_comes
ENSAOCG00000012988	prpf6	100	93.326	ENSIPUG00000004912	prpf6	100	93.326	Ictalurus_punctatus
ENSAOCG00000012988	prpf6	96	90.977	ENSSTOG00000002922	PRPF6	100	90.127	Ictidomys_tridecemlineatus
ENSAOCG00000012988	prpf6	96	93.518	ENSJJAG00000000836	Prpf6	100	93.092	Jaculus_jaculus
ENSAOCG00000012988	prpf6	100	98.349	ENSKMAG00000017800	prpf6	100	98.349	Kryptolebias_marmoratus
ENSAOCG00000012988	prpf6	100	98.039	ENSLBEG00000012582	prpf6	100	98.039	Labrus_bergylta
ENSAOCG00000012988	prpf6	96	94.468	ENSLOCG00000004827	prpf6	96	92.660	Lepisosteus_oculatus
ENSAOCG00000012988	prpf6	96	92.774	ENSLAFG00000005272	PRPF6	100	92.349	Loxodonta_africana
ENSAOCG00000012988	prpf6	96	92.561	ENSMFAG00000037542	PRPF6	100	92.136	Macaca_fascicularis
ENSAOCG00000012988	prpf6	96	86.412	ENSMMUG00000015558	PRPF6	98	93.761	Macaca_mulatta
ENSAOCG00000012988	prpf6	96	79.979	ENSMNEG00000045555	PRPF6	100	79.555	Macaca_nemestrina
ENSAOCG00000012988	prpf6	100	98.349	ENSMAMG00000010718	prpf6	100	98.349	Mastacembelus_armatus
ENSAOCG00000012988	prpf6	90	98.171	ENSMZEG00005026539	prpf6	100	98.171	Maylandia_zebra
ENSAOCG00000012988	prpf6	97	98.188	ENSMZEG00005015261	-	100	98.188	Maylandia_zebra
ENSAOCG00000012988	prpf6	93	93.130	ENSMGAG00000006634	PRPF6	100	92.803	Meleagris_gallopavo
ENSAOCG00000012988	prpf6	96	93.518	ENSMAUG00000013969	Prpf6	100	93.092	Mesocricetus_auratus
ENSAOCG00000012988	prpf6	84	92.214	ENSMICG00000017793	PRPF6	98	92.232	Microcebus_murinus
ENSAOCG00000012988	prpf6	96	93.411	ENSMOCG00000001701	Prpf6	100	92.986	Microtus_ochrogaster
ENSAOCG00000012988	prpf6	96	98.172	ENSMMOG00000020419	prpf6	100	98.172	Mola_mola
ENSAOCG00000012988	prpf6	93	94.205	ENSMODG00000017051	PRPF6	99	93.711	Monodelphis_domestica
ENSAOCG00000012988	prpf6	95	98.478	ENSMALG00000000089	prpf6	100	98.478	Monopterus_albus
ENSAOCG00000012988	prpf6	96	87.141	MGP_CAROLIEiJ_G0024814	Prpf6	100	96.296	Mus_caroli
ENSAOCG00000012988	prpf6	96	93.518	ENSMUSG00000002455	Prpf6	100	96.296	Mus_musculus
ENSAOCG00000012988	prpf6	96	93.518	MGP_PahariEiJ_G0026262	Prpf6	100	96.296	Mus_pahari
ENSAOCG00000012988	prpf6	96	93.518	MGP_SPRETEiJ_G0025741	Prpf6	100	96.296	Mus_spretus
ENSAOCG00000012988	prpf6	86	93.317	ENSMPUG00000008673	PRPF6	98	93.317	Mustela_putorius_furo
ENSAOCG00000012988	prpf6	96	93.624	ENSNGAG00000003365	Prpf6	100	93.199	Nannospalax_galili
ENSAOCG00000012988	prpf6	100	98.349	ENSNBRG00000015025	prpf6	100	98.349	Neolamprologus_brichardi
ENSAOCG00000012988	prpf6	96	92.561	ENSNLEG00000010208	PRPF6	100	92.136	Nomascus_leucogenys
ENSAOCG00000012988	prpf6	96	83.936	ENSMEUG00000009824	-	90	84.190	Notamacropus_eugenii
ENSAOCG00000012988	prpf6	96	87.566	ENSODEG00000004841	PRPF6	100	87.141	Octodon_degus
ENSAOCG00000012988	prpf6	100	98.452	ENSONIG00000017406	prpf6	100	98.452	Oreochromis_niloticus
ENSAOCG00000012988	prpf6	96	93.411	ENSOANG00000004920	PRPF6	100	92.986	Ornithorhynchus_anatinus
ENSAOCG00000012988	prpf6	95	91.202	ENSOCUG00000014151	PRPF6	100	90.773	Oryctolagus_cuniculus
ENSAOCG00000012988	prpf6	100	96.182	ENSORLG00000009592	prpf6	100	96.182	Oryzias_latipes
ENSAOCG00000012988	prpf6	100	96.285	ENSORLG00020001458	prpf6	100	96.285	Oryzias_latipes_hni
ENSAOCG00000012988	prpf6	100	96.285	ENSORLG00015018762	prpf6	100	96.285	Oryzias_latipes_hsok
ENSAOCG00000012988	prpf6	100	97.007	ENSOMEG00000012174	prpf6	100	97.007	Oryzias_melastigma
ENSAOCG00000012988	prpf6	96	86.093	ENSOGAG00000007573	PRPF6	100	85.669	Otolemur_garnettii
ENSAOCG00000012988	prpf6	96	92.561	ENSOARG00000008776	PRPF6	99	92.136	Ovis_aries
ENSAOCG00000012988	prpf6	96	92.667	ENSPPAG00000008686	PRPF6	100	92.242	Pan_paniscus
ENSAOCG00000012988	prpf6	96	93.092	ENSPPRG00000008497	PRPF6	100	92.667	Panthera_pardus
ENSAOCG00000012988	prpf6	93	93.021	ENSPTIG00000011184	PRPF6	97	92.585	Panthera_tigris_altaica
ENSAOCG00000012988	prpf6	96	92.667	ENSPTRG00000013765	PRPF6	100	92.242	Pan_troglodytes
ENSAOCG00000012988	prpf6	96	92.349	ENSPANG00000024135	PRPF6	100	91.923	Papio_anubis
ENSAOCG00000012988	prpf6	98	93.659	ENSPKIG00000005627	prpf6	99	94.894	Paramormyrops_kingsleyae
ENSAOCG00000012988	prpf6	90	93.084	ENSPSIG00000007717	PRPF6	100	92.630	Pelodiscus_sinensis
ENSAOCG00000012988	prpf6	99	95.764	ENSPMGG00000008925	prpf6	99	95.764	Periophthalmus_magnuspinnatus
ENSAOCG00000012988	prpf6	96	93.518	ENSPEMG00000016036	Prpf6	100	93.092	Peromyscus_maniculatus_bairdii
ENSAOCG00000012988	prpf6	97	87.882	ENSPMAG00000006144	prpf6	100	87.882	Petromyzon_marinus
ENSAOCG00000012988	prpf6	96	93.518	ENSPCIG00000017909	PRPF6	100	93.092	Phascolarctos_cinereus
ENSAOCG00000012988	prpf6	100	96.626	ENSPFOG00000006431	prpf6	99	96.626	Poecilia_formosa
ENSAOCG00000012988	prpf6	100	97.420	ENSPLAG00000005974	prpf6	100	97.420	Poecilia_latipinna
ENSAOCG00000012988	prpf6	100	97.626	ENSPMEG00000009977	prpf6	100	97.626	Poecilia_mexicana
ENSAOCG00000012988	prpf6	100	97.523	ENSPREG00000017993	prpf6	95	97.523	Poecilia_reticulata
ENSAOCG00000012988	prpf6	96	92.136	ENSPPYG00000011256	PRPF6	100	91.711	Pongo_abelii
ENSAOCG00000012988	prpf6	91	95.261	ENSPCAG00000006536	PRPF6	88	95.261	Procavia_capensis
ENSAOCG00000012988	prpf6	96	92.667	ENSPCOG00000016881	PRPF6	100	92.242	Propithecus_coquereli
ENSAOCG00000012988	prpf6	96	87.141	ENSPVAG00000014316	PRPF6	100	86.716	Pteropus_vampyrus
ENSAOCG00000012988	prpf6	100	84.600	ENSPNYG00000001939	prpf6	100	84.600	Pundamilia_nyererei
ENSAOCG00000012988	prpf6	100	93.852	ENSPNAG00000015606	prpf6	100	93.852	Pygocentrus_nattereri
ENSAOCG00000012988	prpf6	96	93.411	ENSRNOG00000051498	Prpf6	100	92.986	Rattus_norvegicus
ENSAOCG00000012988	prpf6	96	92.561	ENSRBIG00000043613	PRPF6	100	92.136	Rhinopithecus_bieti
ENSAOCG00000012988	prpf6	96	89.524	ENSRROG00000040969	PRPF6	98	92.388	Rhinopithecus_roxellana
ENSAOCG00000012988	prpf6	87	89.912	ENSSBOG00000020632	PRPF6	93	87.716	Saimiri_boliviensis_boliviensis
ENSAOCG00000012988	prpf6	96	93.518	ENSSHAG00000016810	PRPF6	100	93.092	Sarcophilus_harrisii
ENSAOCG00000012988	prpf6	95	95.484	ENSSFOG00015020859	prpf6	100	95.484	Scleropages_formosus
ENSAOCG00000012988	prpf6	100	96.698	ENSSMAG00000008112	prpf6	100	96.698	Scophthalmus_maximus
ENSAOCG00000012988	prpf6	100	98.968	ENSSDUG00000016142	prpf6	100	98.968	Seriola_dumerili
ENSAOCG00000012988	prpf6	100	98.968	ENSSLDG00000025283	prpf6	99	98.968	Seriola_lalandi_dorsalis
ENSAOCG00000012988	prpf6	90	91.714	ENSSPUG00000018260	PRPF6	100	91.260	Sphenodon_punctatus
ENSAOCG00000012988	prpf6	100	99.278	ENSSPAG00000015850	prpf6	100	99.278	Stegastes_partitus
ENSAOCG00000012988	prpf6	97	91.623	ENSSSCG00000029119	PRPF6	98	92.494	Sus_scrofa
ENSAOCG00000012988	prpf6	96	93.008	ENSTGUG00000007221	PRPF6	100	92.691	Taeniopygia_guttata
ENSAOCG00000012988	prpf6	100	97.007	ENSTRUG00000002920	prpf6	100	97.007	Takifugu_rubripes
ENSAOCG00000012988	prpf6	96	90.861	ENSTNIG00000017873	prpf6	100	90.861	Tetraodon_nigroviridis
ENSAOCG00000012988	prpf6	85	95.000	ENSTBEG00000005348	PRPF6	85	92.778	Tupaia_belangeri
ENSAOCG00000012988	prpf6	96	92.774	ENSTTRG00000013068	PRPF6	100	92.349	Tursiops_truncatus
ENSAOCG00000012988	prpf6	98	88.450	ENSUMAG00000021631	PRPF6	98	91.087	Ursus_maritimus
ENSAOCG00000012988	prpf6	96	93.092	ENSVVUG00000014948	PRPF6	100	92.667	Vulpes_vulpes
ENSAOCG00000012988	prpf6	96	92.872	ENSXETG00000012054	prpf6	97	92.447	Xenopus_tropicalis
ENSAOCG00000012988	prpf6	100	97.523	ENSXCOG00000008082	prpf6	100	97.523	Xiphophorus_couchianus
ENSAOCG00000012988	prpf6	100	97.626	ENSXMAG00000015581	prpf6	100	97.626	Xiphophorus_maculatus