EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAOCG00000013038 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Minus strand
Length: 17243 bases
Position: chrNXFZ01004533.1:34430-51672
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000008955	zf-C2H2	PF00096.26	5.5e-25	1	4
ENSAOCP00000008955	zf-C2H2	PF00096.26	5.5e-25	2	4
ENSAOCP00000008955	zf-C2H2	PF00096.26	5.5e-25	3	4
ENSAOCP00000008955	zf-C2H2	PF00096.26	5.5e-25	4	4
ENSAOCP00000008955	zf-met	PF12874.7	3.8e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000000169	-	7072	-	ENSAOCP00000008955	698 (aa)	-	-

Gene Model

Click here to download ENSAOCG00000013038's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000013038's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAOCG00000013038	-	54	36.475	ENSAOCG00000016287	-	83	36.475
ENSAOCG00000013038	-	53	48.276	ENSAOCG00000011204	-	69	48.276
ENSAOCG00000013038	-	56	38.565	ENSAOCG00000022675	-	96	38.565
ENSAOCG00000013038	-	63	37.374	ENSAOCG00000017602	-	75	37.374
ENSAOCG00000013038	-	54	40.586	ENSAOCG00000015369	-	95	44.643

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000013038	-	100	100.000	ENSAPEG00000018660	-	83	100.000	Amphiprion_percula
ENSAOCG00000013038	-	88	60.417	ENSFHEG00000000789	-	96	53.782	Fundulus_heteroclitus
ENSAOCG00000013038	-	51	45.763	ENSKMAG00000008319	-	93	31.781	Kryptolebias_marmoratus
ENSAOCG00000013038	-	96	44.444	ENSKMAG00000007762	-	64	49.640	Kryptolebias_marmoratus
ENSAOCG00000013038	-	98	55.215	ENSSDUG00000000315	-	81	50.809	Seriola_dumerili