EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAOCG00000013159 (Gene tree)
Gene ID: 111576445
Gene Symbol: dkc1
Alias: fc87a02|fi24a05|fv62a07|wu:fa28f10|wu:fc87a02|wu:fi24a05|wu:fv62a07|zgc:110395
Full Name: dyskerin pseudouridine synthase 1
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Minus strand
Length: 10183 bases
Position: chrNXFZ01003149.1:83188-93370
Accession: 111576445
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000009068	TruB_N	PF01509.18	3.8e-22	1	1
ENSAOCP00000009037	TruB_N	PF01509.18	3.9e-22	1	1
ENSAOCP00000009068	PUA	PF01472.20	3e-17	1	1
ENSAOCP00000009037	PUA	PF01472.20	9e-17	1	1
ENSAOCP00000009068	DKCLD	PF08068.12	8.1e-31	1	1
ENSAOCP00000009037	DKCLD	PF08068.12	8.1e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000015670	-	1479	-	ENSAOCP00000009037	492 (aa)	-	-
ENSAOCT00000029276	-	3729	XM_023282115	ENSAOCP00000009068	537 (aa)	XP_023137883	UPI000C30DBB7

Gene Model

Click here to download ENSAOCG00000013159's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000013159's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000013159	dkc1	93	77.119	ENSG00000130826	DKC1	99	86.408	Homo_sapiens
ENSAOCG00000013159	dkc1	95	98.031	ENSAPOG00000007799	dkc1	100	98.031	Acanthochromis_polyacanthus
ENSAOCG00000013159	dkc1	85	83.095	ENSAMEG00000002776	DKC1	85	82.135	Ailuropoda_melanoleuca
ENSAOCG00000013159	dkc1	95	90.171	ENSACIG00000022614	dkc1	94	90.171	Amphilophus_citrinellus
ENSAOCG00000013159	dkc1	100	99.187	ENSAPEG00000002284	dkc1	100	100.000	Amphiprion_percula
ENSAOCG00000013159	dkc1	95	86.250	ENSATEG00000013682	dkc1	96	86.032	Anabas_testudineus
ENSAOCG00000013159	dkc1	95	78.958	ENSACAG00000015600	DKC1	76	83.484	Anolis_carolinensis
ENSAOCG00000013159	dkc1	92	78.038	ENSANAG00000022732	DKC1	91	78.769	Aotus_nancymaae
ENSAOCG00000013159	dkc1	96	86.653	ENSACLG00000015605	dkc1	99	81.744	Astatotilapia_calliptera
ENSAOCG00000013159	dkc1	87	88.345	ENSAMXG00000017108	dkc1	99	82.846	Astyanax_mexicanus
ENSAOCG00000013159	dkc1	87	79.727	ENSBTAG00000013045	DKC1	86	80.455	Bos_taurus
ENSAOCG00000013159	dkc1	82	64.268	WBGene00010478	K01G5.5	97	61.894	Caenorhabditis_elegans
ENSAOCG00000013159	dkc1	92	77.872	ENSCJAG00000004210	DKC1	91	78.132	Callithrix_jacchus
ENSAOCG00000013159	dkc1	90	79.186	ENSCAFG00000019620	-	77	85.500	Canis_familiaris
ENSAOCG00000013159	dkc1	89	70.843	ENSCAFG00000009311	-	81	74.634	Canis_familiaris
ENSAOCG00000013159	dkc1	89	69.932	ENSCAFG00020009379	-	75	75.505	Canis_lupus_dingo
ENSAOCG00000013159	dkc1	90	79.186	ENSCAFG00020008918	-	77	85.500	Canis_lupus_dingo
ENSAOCG00000013159	dkc1	86	80.230	ENSCHIG00000017392	DKC1	93	75.051	Capra_hircus
ENSAOCG00000013159	dkc1	90	78.876	ENSTSYG00000007681	DKC1	86	79.333	Carlito_syrichta
ENSAOCG00000013159	dkc1	74	87.845	ENSCAPG00000003342	DKC1	98	78.161	Cavia_aperea
ENSAOCG00000013159	dkc1	81	85.894	ENSCPOG00000008825	DKC1	91	77.919	Cavia_porcellus
ENSAOCG00000013159	dkc1	92	68.870	ENSCCAG00000027418	DKC1	90	69.639	Cebus_capucinus
ENSAOCG00000013159	dkc1	93	76.907	ENSCATG00000033602	DKC1	91	77.919	Cercocebus_atys
ENSAOCG00000013159	dkc1	81	86.146	ENSCLAG00000000720	DKC1	92	78.981	Chinchilla_lanigera
ENSAOCG00000013159	dkc1	93	76.907	ENSCSAG00000006706	DKC1	91	77.919	Chlorocebus_sabaeus
ENSAOCG00000013159	dkc1	80	87.374	ENSCPBG00000005858	DKC1	88	85.401	Chrysemys_picta_bellii
ENSAOCG00000013159	dkc1	84	77.913	ENSCING00000004599	-	78	79.551	Ciona_intestinalis
ENSAOCG00000013159	dkc1	80	80.711	ENSCSAVG00000010047	-	94	76.777	Ciona_savignyi
ENSAOCG00000013159	dkc1	93	76.907	ENSCANG00000027987	DKC1	91	77.919	Colobus_angolensis_palliatus
ENSAOCG00000013159	dkc1	87	80.090	ENSCGRG00001014574	-	86	81.364	Cricetulus_griseus_chok1gshd
ENSAOCG00000013159	dkc1	96	57.537	ENSCGRG00001016789	-	98	59.598	Cricetulus_griseus_chok1gshd
ENSAOCG00000013159	dkc1	87	80.090	ENSCGRG00000016075	-	86	81.364	Cricetulus_griseus_crigri
ENSAOCG00000013159	dkc1	96	57.537	ENSCGRG00000014809	-	94	57.537	Cricetulus_griseus_crigri
ENSAOCG00000013159	dkc1	96	84.421	ENSCSEG00000012633	dkc1	97	83.405	Cynoglossus_semilaevis
ENSAOCG00000013159	dkc1	87	91.142	ENSCVAG00000010155	dkc1	93	88.454	Cyprinodon_variegatus
ENSAOCG00000013159	dkc1	84	91.041	ENSDARG00000016484	dkc1	99	82.840	Danio_rerio
ENSAOCG00000013159	dkc1	93	76.744	ENSDNOG00000004218	DKC1	90	78.879	Dasypus_novemcinctus
ENSAOCG00000013159	dkc1	57	72.662	ENSDORG00000013566	-	91	73.188	Dipodomys_ordii
ENSAOCG00000013159	dkc1	87	68.591	FBgn0259937	Nop60B	88	69.000	Drosophila_melanogaster
ENSAOCG00000013159	dkc1	80	84.596	ENSETEG00000016095	DKC1	80	85.242	Echinops_telfairi
ENSAOCG00000013159	dkc1	65	79.688	ENSEBUG00000015962	dkc1	98	81.443	Eptatretus_burgeri
ENSAOCG00000013159	dkc1	90	79.186	ENSEASG00005007484	DKC1	77	85.786	Equus_asinus_asinus
ENSAOCG00000013159	dkc1	90	79.186	ENSECAG00000023524	DKC1	77	85.786	Equus_caballus
ENSAOCG00000013159	dkc1	79	86.340	ENSEEUG00000003323	DKC1	99	81.604	Erinaceus_europaeus
ENSAOCG00000013159	dkc1	87	88.915	ENSELUG00000014538	dkc1	90	88.377	Esox_lucius
ENSAOCG00000013159	dkc1	80	85.606	ENSFCAG00000006577	DKC1	85	81.713	Felis_catus
ENSAOCG00000013159	dkc1	91	80.132	ENSFALG00000011496	DKC1	93	78.395	Ficedula_albicollis
ENSAOCG00000013159	dkc1	93	78.571	ENSFDAG00000002516	DKC1	94	77.053	Fukomys_damarensis
ENSAOCG00000013159	dkc1	86	89.835	ENSFHEG00000004627	dkc1	97	86.558	Fundulus_heteroclitus
ENSAOCG00000013159	dkc1	79	89.770	ENSGMOG00000017277	dkc1	100	89.770	Gadus_morhua
ENSAOCG00000013159	dkc1	90	82.127	ENSGALG00000005054	DKC1	89	81.264	Gallus_gallus
ENSAOCG00000013159	dkc1	87	90.719	ENSGAFG00000011486	dkc1	84	87.195	Gambusia_affinis
ENSAOCG00000013159	dkc1	80	92.929	ENSGACG00000004373	dkc1	96	95.137	Gasterosteus_aculeatus
ENSAOCG00000013159	dkc1	88	80.769	ENSGAGG00000011330	DKC1	89	81.441	Gopherus_agassizii
ENSAOCG00000013159	dkc1	93	77.119	ENSGGOG00000001045	DKC1	91	78.344	Gorilla_gorilla
ENSAOCG00000013159	dkc1	95	88.060	ENSHBUG00000012436	dkc1	99	88.757	Haplochromis_burtoni
ENSAOCG00000013159	dkc1	81	85.139	ENSHGLG00000000649	DKC1	91	77.399	Heterocephalus_glaber_female
ENSAOCG00000013159	dkc1	81	85.139	ENSHGLG00100001153	DKC1	92	77.399	Heterocephalus_glaber_male
ENSAOCG00000013159	dkc1	93	85.560	ENSHCOG00000021099	dkc1	84	89.858	Hippocampus_comes
ENSAOCG00000013159	dkc1	86	88.124	ENSIPUG00000010309	dkc1	99	80.851	Ictalurus_punctatus
ENSAOCG00000013159	dkc1	81	73.804	ENSSTOG00000011904	-	82	69.977	Ictidomys_tridecemlineatus
ENSAOCG00000013159	dkc1	86	74.065	ENSSTOG00000020149	-	93	69.057	Ictidomys_tridecemlineatus
ENSAOCG00000013159	dkc1	82	85.287	ENSSTOG00000001074	-	90	80.952	Ictidomys_tridecemlineatus
ENSAOCG00000013159	dkc1	56	72.924	ENSJJAG00000010086	-	92	73.022	Jaculus_jaculus
ENSAOCG00000013159	dkc1	87	88.112	ENSKMAG00000008010	dkc1	90	89.333	Kryptolebias_marmoratus
ENSAOCG00000013159	dkc1	86	90.164	ENSLBEG00000019122	dkc1	92	91.333	Labrus_bergylta
ENSAOCG00000013159	dkc1	88	82.110	ENSLACG00000014025	DKC1	90	88.041	Latimeria_chalumnae
ENSAOCG00000013159	dkc1	88	86.758	ENSLOCG00000013713	dkc1	88	90.499	Lepisosteus_oculatus
ENSAOCG00000013159	dkc1	87	79.863	ENSLAFG00000000221	DKC1	86	80.952	Loxodonta_africana
ENSAOCG00000013159	dkc1	92	77.186	ENSMFAG00000032398	DKC1	84	75.149	Macaca_fascicularis
ENSAOCG00000013159	dkc1	93	76.907	ENSMMUG00000005768	DKC1	91	77.919	Macaca_mulatta
ENSAOCG00000013159	dkc1	93	76.907	ENSMNEG00000034503	DKC1	91	77.919	Macaca_nemestrina
ENSAOCG00000013159	dkc1	93	76.907	ENSMLEG00000034422	DKC1	91	77.919	Mandrillus_leucophaeus
ENSAOCG00000013159	dkc1	84	92.344	ENSMAMG00000005427	dkc1	92	93.431	Mastacembelus_armatus
ENSAOCG00000013159	dkc1	95	88.273	ENSMZEG00005014503	dkc1	99	88.955	Maylandia_zebra
ENSAOCG00000013159	dkc1	83	82.843	ENSMGAG00000009238	DKC1	88	83.663	Meleagris_gallopavo
ENSAOCG00000013159	dkc1	57	71.942	ENSMAUG00000016454	-	100	69.667	Mesocricetus_auratus
ENSAOCG00000013159	dkc1	80	85.101	ENSMICG00000038751	-	80	85.250	Microcebus_murinus
ENSAOCG00000013159	dkc1	86	69.773	ENSMICG00000002818	-	99	75.890	Microcebus_murinus
ENSAOCG00000013159	dkc1	57	69.424	ENSMOCG00000001169	-	100	67.333	Microtus_ochrogaster
ENSAOCG00000013159	dkc1	82	92.840	ENSMMOG00000020348	dkc1	89	93.888	Mola_mola
ENSAOCG00000013159	dkc1	80	86.768	ENSMODG00000009243	DKC1	74	82.824	Monodelphis_domestica
ENSAOCG00000013159	dkc1	98	84.568	ENSMALG00000009454	dkc1	95	87.885	Monopterus_albus
ENSAOCG00000013159	dkc1	87	68.904	MGP_CAROLIEiJ_G0033191	Dkc1	86	81.890	Mus_caroli
ENSAOCG00000013159	dkc1	93	77.447	ENSMUSG00000031403	Dkc1	100	70.333	Mus_musculus
ENSAOCG00000013159	dkc1	80	86.514	MGP_PahariEiJ_G0031735	Dkc1	100	69.667	Mus_pahari
ENSAOCG00000013159	dkc1	93	77.282	MGP_SPRETEiJ_G0034351	Dkc1	100	70.333	Mus_spretus
ENSAOCG00000013159	dkc1	89	80.000	ENSMPUG00000016136	DKC1	84	77.193	Mustela_putorius_furo
ENSAOCG00000013159	dkc1	87	75.676	ENSMLUG00000011918	DKC1	85	76.404	Myotis_lucifugus
ENSAOCG00000013159	dkc1	57	72.662	ENSNGAG00000015724	-	91	73.551	Nannospalax_galili
ENSAOCG00000013159	dkc1	81	94.236	ENSNBRG00000005638	dkc1	80	95.443	Neolamprologus_brichardi
ENSAOCG00000013159	dkc1	93	76.907	ENSNLEG00000014323	DKC1	91	78.132	Nomascus_leucogenys
ENSAOCG00000013159	dkc1	80	83.715	ENSMEUG00000001066	DKC1	94	78.738	Notamacropus_eugenii
ENSAOCG00000013159	dkc1	70	80.000	ENSOPRG00000005248	DKC1	69	80.000	Ochotona_princeps
ENSAOCG00000013159	dkc1	80	86.616	ENSODEG00000011816	-	85	82.529	Octodon_degus
ENSAOCG00000013159	dkc1	57	72.302	ENSODEG00000000549	-	100	70.333	Octodon_degus
ENSAOCG00000013159	dkc1	95	88.273	ENSONIG00000013889	dkc1	97	89.047	Oreochromis_niloticus
ENSAOCG00000013159	dkc1	92	79.140	ENSOANG00000008713	-	99	78.163	Ornithorhynchus_anatinus
ENSAOCG00000013159	dkc1	64	58.284	ENSOANG00000022295	-	95	58.651	Ornithorhynchus_anatinus
ENSAOCG00000013159	dkc1	86	80.137	ENSOCUG00000012646	DKC1	95	76.364	Oryctolagus_cuniculus
ENSAOCG00000013159	dkc1	91	89.310	ENSORLG00000018748	dkc1	83	90.476	Oryzias_latipes
ENSAOCG00000013159	dkc1	94	82.249	ENSOMEG00000005786	dkc1	82	91.176	Oryzias_melastigma
ENSAOCG00000013159	dkc1	80	86.111	ENSOGAG00000003399	DKC1	90	77.215	Otolemur_garnettii
ENSAOCG00000013159	dkc1	86	80.460	ENSOARG00000003047	DKC1	93	75.256	Ovis_aries
ENSAOCG00000013159	dkc1	89	80.275	ENSPPAG00000023820	DKC1	85	81.364	Pan_paniscus
ENSAOCG00000013159	dkc1	80	86.260	ENSPPRG00000009104	DKC1	85	81.713	Panthera_pardus
ENSAOCG00000013159	dkc1	85	82.619	ENSPTIG00000017469	DKC1	84	83.333	Panthera_tigris_altaica
ENSAOCG00000013159	dkc1	93	77.119	ENSPTRG00000022449	DKC1	91	78.344	Pan_troglodytes
ENSAOCG00000013159	dkc1	92	77.612	ENSPTRG00000043416	-	86	74.369	Pan_troglodytes
ENSAOCG00000013159	dkc1	93	76.907	ENSPANG00000011978	DKC1	91	77.919	Papio_anubis
ENSAOCG00000013159	dkc1	87	87.529	ENSPKIG00000008443	dkc1	91	87.935	Paramormyrops_kingsleyae
ENSAOCG00000013159	dkc1	73	89.385	ENSPSIG00000013765	DKC1	86	89.385	Pelodiscus_sinensis
ENSAOCG00000013159	dkc1	93	79.332	ENSPMGG00000004097	dkc1	87	78.647	Periophthalmus_magnuspinnatus
ENSAOCG00000013159	dkc1	67	84.444	ENSPEMG00000013348	Dkc1	82	85.799	Peromyscus_maniculatus_bairdii
ENSAOCG00000013159	dkc1	80	87.277	ENSPCIG00000016706	DKC1	75	80.846	Phascolarctos_cinereus
ENSAOCG00000013159	dkc1	88	90.741	ENSPFOG00000018653	dkc1	97	87.347	Poecilia_formosa
ENSAOCG00000013159	dkc1	88	90.741	ENSPLAG00000003272	dkc1	88	87.195	Poecilia_latipinna
ENSAOCG00000013159	dkc1	88	90.509	ENSPMEG00000010413	dkc1	97	87.143	Poecilia_mexicana
ENSAOCG00000013159	dkc1	88	90.826	ENSPREG00000004100	dkc1	96	86.613	Poecilia_reticulata
ENSAOCG00000013159	dkc1	92	77.612	ENSPPYG00000020892	DKC1	92	78.344	Pongo_abelii
ENSAOCG00000013159	dkc1	74	86.740	ENSPCAG00000015034	DKC1	72	86.376	Procavia_capensis
ENSAOCG00000013159	dkc1	93	76.221	ENSPCOG00000026874	DKC1	85	80.455	Propithecus_coquereli
ENSAOCG00000013159	dkc1	87	80.698	ENSPVAG00000009222	DKC1	86	82.135	Pteropus_vampyrus
ENSAOCG00000013159	dkc1	96	85.979	ENSPNYG00000020063	dkc1	99	83.597	Pundamilia_nyererei
ENSAOCG00000013159	dkc1	87	86.574	ENSPNAG00000005780	dkc1	87	85.714	Pygocentrus_nattereri
ENSAOCG00000013159	dkc1	93	74.522	ENSRNOG00000055562	Dkc1	88	75.670	Rattus_norvegicus
ENSAOCG00000013159	dkc1	93	76.907	ENSRBIG00000028457	DKC1	84	75.149	Rhinopithecus_bieti
ENSAOCG00000013159	dkc1	93	76.907	ENSRROG00000044780	DKC1	91	77.919	Rhinopithecus_roxellana
ENSAOCG00000013159	dkc1	78	71.615	YLR175W	-	86	68.281	Saccharomyces_cerevisiae
ENSAOCG00000013159	dkc1	86	80.365	ENSSBOG00000033746	DKC1	95	76.162	Saimiri_boliviensis_boliviensis
ENSAOCG00000013159	dkc1	91	78.795	ENSSHAG00000002463	DKC1	90	83.138	Sarcophilus_harrisii
ENSAOCG00000013159	dkc1	87	86.041	ENSSFOG00015009585	dkc1	100	82.031	Scleropages_formosus
ENSAOCG00000013159	dkc1	87	88.479	ENSSMAG00000002552	dkc1	96	83.707	Scophthalmus_maximus
ENSAOCG00000013159	dkc1	91	89.528	ENSSDUG00000009963	dkc1	100	88.431	Seriola_dumerili
ENSAOCG00000013159	dkc1	87	91.784	ENSSLDG00000019342	dkc1	89	90.766	Seriola_lalandi_dorsalis
ENSAOCG00000013159	dkc1	93	74.353	ENSSARG00000001822	DKC1	87	77.346	Sorex_araneus
ENSAOCG00000013159	dkc1	80	87.374	ENSSPUG00000018907	DKC1	90	78.858	Sphenodon_punctatus
ENSAOCG00000013159	dkc1	94	93.562	ENSSPAG00000002585	dkc1	92	88.934	Stegastes_partitus
ENSAOCG00000013159	dkc1	81	85.213	ENSSSCG00000012823	DKC1	83	86.111	Sus_scrofa
ENSAOCG00000013159	dkc1	85	81.971	ENSTGUG00000006781	DKC1	88	85.000	Taeniopygia_guttata
ENSAOCG00000013159	dkc1	93	86.957	ENSTRUG00000004413	dkc1	97	85.540	Takifugu_rubripes
ENSAOCG00000013159	dkc1	87	71.267	ENSTNIG00000002582	dkc1	87	72.809	Tetraodon_nigroviridis
ENSAOCG00000013159	dkc1	63	77.994	ENSTBEG00000011262	DKC1	84	80.719	Tupaia_belangeri
ENSAOCG00000013159	dkc1	56	87.004	ENSTTRG00000008089	DKC1	55	87.004	Tursiops_truncatus
ENSAOCG00000013159	dkc1	90	79.910	ENSUAMG00000022721	DKC1	87	83.575	Ursus_americanus
ENSAOCG00000013159	dkc1	90	79.186	ENSUMAG00000016899	DKC1	99	82.020	Ursus_maritimus
ENSAOCG00000013159	dkc1	92	76.201	ENSVVUG00000020734	-	82	73.904	Vulpes_vulpes
ENSAOCG00000013159	dkc1	88	66.437	ENSVVUG00000021671	-	78	66.979	Vulpes_vulpes
ENSAOCG00000013159	dkc1	89	83.562	ENSXETG00000032517	DKC1	89	82.851	Xenopus_tropicalis
ENSAOCG00000013159	dkc1	88	90.115	ENSXCOG00000005498	dkc1	99	88.699	Xiphophorus_couchianus
ENSAOCG00000013159	dkc1	88	90.278	ENSXMAG00000004919	dkc1	97	87.810	Xiphophorus_maculatus