EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAOCG00000013361 (Gene tree)
Gene ID: 111572879
Gene Symbol: cmss1
Alias: zgc:101814
Full Name: cms1 ribosomal small subunit homolog
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Plus strand
Length: 33482 bases
Position: chrNXFZ01002882.1:662055-695536
Accession: 111572879
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000025650	CMS1	PF14617.6	3.3e-33	1	1
ENSAOCP00000025650	DEAD	PF00270.29	5.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000015940	-	1266	XM_023276746	ENSAOCP00000025650	289 (aa)	XP_023132514	UPI000C30145E

Gene Model

Click here to download ENSAOCG00000013361's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000013361's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000013361	cmss1	100	52.381	ENSG00000184220	CMSS1	98	62.500	Homo_sapiens
ENSAOCG00000013361	cmss1	93	83.582	ENSAPOG00000010604	cmss1	89	89.520	Acanthochromis_polyacanthus
ENSAOCG00000013361	cmss1	70	64.039	ENSAMEG00000004092	CMSS1	78	64.039	Ailuropoda_melanoleuca
ENSAOCG00000013361	cmss1	91	73.384	ENSACIG00000021854	cmss1	87	74.678	Amphilophus_citrinellus
ENSAOCG00000013361	cmss1	100	99.310	ENSAPEG00000005829	cmss1	100	99.310	Amphiprion_percula
ENSAOCG00000013361	cmss1	100	77.241	ENSATEG00000008209	cmss1	100	74.740	Anabas_testudineus
ENSAOCG00000013361	cmss1	70	62.376	ENSAPLG00000010542	CMSS1	88	62.376	Anas_platyrhynchos
ENSAOCG00000013361	cmss1	96	53.763	ENSACAG00000011065	CMSS1	74	62.376	Anolis_carolinensis
ENSAOCG00000013361	cmss1	100	51.903	ENSANAG00000023565	CMSS1	100	52.595	Aotus_nancymaae
ENSAOCG00000013361	cmss1	100	78.694	ENSACLG00000027294	cmss1	100	78.694	Astatotilapia_calliptera
ENSAOCG00000013361	cmss1	100	59.184	ENSAMXG00000002046	cmss1	100	57.432	Astyanax_mexicanus
ENSAOCG00000013361	cmss1	100	52.249	ENSBTAG00000013663	CMSS1	100	52.595	Bos_taurus
ENSAOCG00000013361	cmss1	100	52.595	ENSCJAG00000000610	CMSS1	100	51.020	Callithrix_jacchus
ENSAOCG00000013361	cmss1	70	64.851	ENSCAFG00000009230	CMSS1	73	64.851	Canis_familiaris
ENSAOCG00000013361	cmss1	70	64.851	ENSCAFG00020009464	-	74	64.851	Canis_lupus_dingo
ENSAOCG00000013361	cmss1	65	66.138	ENSCAFG00020024156	-	63	62.871	Canis_lupus_dingo
ENSAOCG00000013361	cmss1	97	52.688	ENSCHIG00000013003	CMSS1	73	63.366	Capra_hircus
ENSAOCG00000013361	cmss1	70	63.861	ENSTSYG00000009266	CMSS1	78	63.861	Carlito_syrichta
ENSAOCG00000013361	cmss1	65	56.614	ENSCAPG00000013584	CMSS1	88	56.614	Cavia_aperea
ENSAOCG00000013361	cmss1	100	54.545	ENSCPOG00000014680	CMSS1	100	52.365	Cavia_porcellus
ENSAOCG00000013361	cmss1	100	52.941	ENSCCAG00000034685	CMSS1	100	53.633	Cebus_capucinus
ENSAOCG00000013361	cmss1	100	52.508	ENSCATG00000031980	CMSS1	100	50.825	Cercocebus_atys
ENSAOCG00000013361	cmss1	69	63.500	ENSCLAG00000011241	CMSS1	87	63.861	Chinchilla_lanigera
ENSAOCG00000013361	cmss1	70	64.851	ENSCSAG00000006024	CMSS1	82	64.851	Chlorocebus_sabaeus
ENSAOCG00000013361	cmss1	100	40.893	ENSCHOG00000012098	CMSS1	100	38.276	Choloepus_hoffmanni
ENSAOCG00000013361	cmss1	67	41.837	ENSCING00000014848	-	96	43.333	Ciona_intestinalis
ENSAOCG00000013361	cmss1	100	52.174	ENSCANG00000031337	CMSS1	100	50.825	Colobus_angolensis_palliatus
ENSAOCG00000013361	cmss1	100	50.519	ENSCGRG00001014305	Cmss1	100	49.827	Cricetulus_griseus_chok1gshd
ENSAOCG00000013361	cmss1	70	61.881	ENSCGRG00000006722	Cmss1	79	61.881	Cricetulus_griseus_crigri
ENSAOCG00000013361	cmss1	100	73.129	ENSCSEG00000004958	cmss1	100	68.707	Cynoglossus_semilaevis
ENSAOCG00000013361	cmss1	100	78.351	ENSCVAG00000005039	cmss1	100	75.601	Cyprinodon_variegatus
ENSAOCG00000013361	cmss1	100	63.014	ENSDARG00000112579	cmss1	100	63.014	Danio_rerio
ENSAOCG00000013361	cmss1	70	62.871	ENSDNOG00000040418	CMSS1	73	62.871	Dasypus_novemcinctus
ENSAOCG00000013361	cmss1	100	52.901	ENSDORG00000010461	Cmss1	100	52.595	Dipodomys_ordii
ENSAOCG00000013361	cmss1	69	63.000	ENSEASG00005010966	CMSS1	92	63.366	Equus_asinus_asinus
ENSAOCG00000013361	cmss1	69	63.000	ENSECAG00000015662	CMSS1	89	63.366	Equus_caballus
ENSAOCG00000013361	cmss1	69	43.500	ENSEEUG00000007624	-	73	44.059	Erinaceus_europaeus
ENSAOCG00000013361	cmss1	100	63.123	ENSELUG00000019459	cmss1	100	63.455	Esox_lucius
ENSAOCG00000013361	cmss1	100	53.633	ENSFCAG00000044577	CMSS1	100	52.218	Felis_catus
ENSAOCG00000013361	cmss1	70	61.386	ENSFALG00000005816	CMSS1	85	61.386	Ficedula_albicollis
ENSAOCG00000013361	cmss1	70	65.347	ENSFDAG00000012577	CMSS1	89	65.347	Fukomys_damarensis
ENSAOCG00000013361	cmss1	80	82.759	ENSFHEG00000012008	cmss1	95	81.034	Fundulus_heteroclitus
ENSAOCG00000013361	cmss1	99	68.881	ENSGMOG00000016729	cmss1	100	64.336	Gadus_morhua
ENSAOCG00000013361	cmss1	70	63.366	ENSGALG00000015267	CMSS1	77	63.366	Gallus_gallus
ENSAOCG00000013361	cmss1	92	75.940	ENSGAFG00000021217	cmss1	77	85.714	Gambusia_affinis
ENSAOCG00000013361	cmss1	99	71.678	ENSGACG00000002798	cmss1	100	69.580	Gasterosteus_aculeatus
ENSAOCG00000013361	cmss1	70	64.356	ENSGAGG00000019861	CMSS1	79	64.356	Gopherus_agassizii
ENSAOCG00000013361	cmss1	70	64.356	ENSGGOG00000014125	CMSS1	77	64.356	Gorilla_gorilla
ENSAOCG00000013361	cmss1	100	79.655	ENSHBUG00000008431	cmss1	100	80.345	Haplochromis_burtoni
ENSAOCG00000013361	cmss1	69	64.500	ENSHGLG00000019481	CMSS1	82	64.851	Heterocephalus_glaber_female
ENSAOCG00000013361	cmss1	69	64.500	ENSHGLG00100010314	CMSS1	81	64.851	Heterocephalus_glaber_male
ENSAOCG00000013361	cmss1	100	67.797	ENSHCOG00000003222	cmss1	100	64.407	Hippocampus_comes
ENSAOCG00000013361	cmss1	100	62.759	ENSIPUG00000011591	cmss1	100	62.759	Ictalurus_punctatus
ENSAOCG00000013361	cmss1	100	52.349	ENSSTOG00000019366	CMSS1	100	50.680	Ictidomys_tridecemlineatus
ENSAOCG00000013361	cmss1	100	53.716	ENSJJAG00000014894	Cmss1	90	64.851	Jaculus_jaculus
ENSAOCG00000013361	cmss1	92	64.419	ENSKMAG00000002390	cmss1	82	72.906	Kryptolebias_marmoratus
ENSAOCG00000013361	cmss1	70	80.882	ENSLBEG00000006298	cmss1	83	80.882	Labrus_bergylta
ENSAOCG00000013361	cmss1	70	65.842	ENSLACG00000009293	CMSS1	88	65.842	Latimeria_chalumnae
ENSAOCG00000013361	cmss1	100	54.671	ENSLOCG00000009391	cmss1	100	54.671	Lepisosteus_oculatus
ENSAOCG00000013361	cmss1	69	62.000	ENSLAFG00000017509	CMSS1	89	62.376	Loxodonta_africana
ENSAOCG00000013361	cmss1	100	51.839	ENSMFAG00000045006	CMSS1	100	50.495	Macaca_fascicularis
ENSAOCG00000013361	cmss1	100	51.505	ENSMMUG00000002939	CMSS1	100	50.165	Macaca_mulatta
ENSAOCG00000013361	cmss1	100	51.839	ENSMNEG00000031315	CMSS1	100	50.495	Macaca_nemestrina
ENSAOCG00000013361	cmss1	100	51.839	ENSMLEG00000033660	CMSS1	100	50.495	Mandrillus_leucophaeus
ENSAOCG00000013361	cmss1	100	80.690	ENSMAMG00000017176	cmss1	100	78.276	Mastacembelus_armatus
ENSAOCG00000013361	cmss1	100	78.694	ENSMZEG00005021886	cmss1	100	78.694	Maylandia_zebra
ENSAOCG00000013361	cmss1	70	63.366	ENSMGAG00000014360	CMSS1	89	63.366	Meleagris_gallopavo
ENSAOCG00000013361	cmss1	100	39.527	ENSMAUG00000020609	Cmss1	100	37.370	Mesocricetus_auratus
ENSAOCG00000013361	cmss1	100	54.027	ENSMICG00000048977	CMSS1	100	53.793	Microcebus_murinus
ENSAOCG00000013361	cmss1	100	51.877	ENSMOCG00000021937	Cmss1	100	50.173	Microtus_ochrogaster
ENSAOCG00000013361	cmss1	89	73.462	ENSMMOG00000019794	cmss1	84	84.236	Mola_mola
ENSAOCG00000013361	cmss1	91	55.472	ENSMODG00000002275	CMSS1	83	57.511	Monodelphis_domestica
ENSAOCG00000013361	cmss1	100	79.795	ENSMALG00000004250	cmss1	100	77.663	Monopterus_albus
ENSAOCG00000013361	cmss1	100	53.633	MGP_CAROLIEiJ_G0020824	Cmss1	100	52.595	Mus_caroli
ENSAOCG00000013361	cmss1	100	52.941	ENSMUSG00000022748	Cmss1	100	51.903	Mus_musculus
ENSAOCG00000013361	cmss1	100	52.595	MGP_PahariEiJ_G0016524	Cmss1	100	52.595	Mus_pahari
ENSAOCG00000013361	cmss1	100	52.595	MGP_SPRETEiJ_G0021724	Cmss1	100	51.557	Mus_spretus
ENSAOCG00000013361	cmss1	69	63.819	ENSMPUG00000011324	CMSS1	78	64.179	Mustela_putorius_furo
ENSAOCG00000013361	cmss1	69	63.861	ENSMLUG00000001131	CMSS1	78	64.216	Myotis_lucifugus
ENSAOCG00000013361	cmss1	100	51.839	ENSNGAG00000020316	Cmss1	100	51.195	Nannospalax_galili
ENSAOCG00000013361	cmss1	100	79.038	ENSNBRG00000003095	cmss1	100	78.694	Neolamprologus_brichardi
ENSAOCG00000013361	cmss1	100	53.512	ENSNLEG00000034172	CMSS1	100	51.195	Nomascus_leucogenys
ENSAOCG00000013361	cmss1	79	50.877	ENSMEUG00000014505	CMSS1	89	52.970	Notamacropus_eugenii
ENSAOCG00000013361	cmss1	100	53.448	ENSOPRG00000002986	CMSS1	100	50.000	Ochotona_princeps
ENSAOCG00000013361	cmss1	100	45.675	ENSODEG00000009446	-	100	44.983	Octodon_degus
ENSAOCG00000013361	cmss1	100	54.576	ENSODEG00000005226	-	100	52.041	Octodon_degus
ENSAOCG00000013361	cmss1	100	46.918	ENSODEG00000001853	-	100	45.361	Octodon_degus
ENSAOCG00000013361	cmss1	100	50.173	ENSODEG00000003558	-	100	49.827	Octodon_degus
ENSAOCG00000013361	cmss1	90	80.843	ENSONIG00000006678	cmss1	89	83.262	Oreochromis_niloticus
ENSAOCG00000013361	cmss1	76	59.817	ENSOANG00000007529	CMSS1	87	61.386	Ornithorhynchus_anatinus
ENSAOCG00000013361	cmss1	70	63.366	ENSOCUG00000025366	CMSS1	73	63.366	Oryctolagus_cuniculus
ENSAOCG00000013361	cmss1	100	73.702	ENSORLG00000020340	cmss1	100	73.702	Oryzias_latipes
ENSAOCG00000013361	cmss1	90	64.231	ENSORLG00020012235	cmss1	86	74.877	Oryzias_latipes_hni
ENSAOCG00000013361	cmss1	91	65.918	ENSORLG00015015551	cmss1	76	74.384	Oryzias_latipes_hsok
ENSAOCG00000013361	cmss1	100	74.227	ENSOMEG00000012555	cmss1	100	72.852	Oryzias_melastigma
ENSAOCG00000013361	cmss1	70	64.851	ENSOGAG00000002045	CMSS1	89	64.851	Otolemur_garnettii
ENSAOCG00000013361	cmss1	97	52.500	ENSOARG00000017899	CMSS1	70	63.054	Ovis_aries
ENSAOCG00000013361	cmss1	70	64.356	ENSPPAG00000038515	CMSS1	74	64.356	Pan_paniscus
ENSAOCG00000013361	cmss1	100	55.670	ENSPPRG00000016767	CMSS1	100	52.218	Panthera_pardus
ENSAOCG00000013361	cmss1	100	53.633	ENSPTIG00000018274	CMSS1	100	51.877	Panthera_tigris_altaica
ENSAOCG00000013361	cmss1	100	52.508	ENSPTRG00000015157	CMSS1	100	50.512	Pan_troglodytes
ENSAOCG00000013361	cmss1	70	64.851	ENSPANG00000019980	CMSS1	80	64.851	Papio_anubis
ENSAOCG00000013361	cmss1	98	60.839	ENSPKIG00000012609	cmss1	97	62.121	Paramormyrops_kingsleyae
ENSAOCG00000013361	cmss1	70	64.851	ENSPSIG00000003849	CMSS1	88	64.851	Pelodiscus_sinensis
ENSAOCG00000013361	cmss1	70	80.882	ENSPMGG00000010286	cmss1	88	80.882	Periophthalmus_magnuspinnatus
ENSAOCG00000013361	cmss1	100	53.979	ENSPEMG00000016384	Cmss1	100	52.218	Peromyscus_maniculatus_bairdii
ENSAOCG00000013361	cmss1	71	50.980	ENSPMAG00000001146	cmss1	99	51.232	Petromyzon_marinus
ENSAOCG00000013361	cmss1	96	53.261	ENSPCIG00000015656	CMSS1	77	62.871	Phascolarctos_cinereus
ENSAOCG00000013361	cmss1	100	76.289	ENSPFOG00000016849	cmss1	100	71.379	Poecilia_formosa
ENSAOCG00000013361	cmss1	100	75.945	ENSPLAG00000008323	cmss1	100	71.034	Poecilia_latipinna
ENSAOCG00000013361	cmss1	100	78.694	ENSPMEG00000021020	cmss1	100	77.663	Poecilia_mexicana
ENSAOCG00000013361	cmss1	95	78.986	ENSPREG00000007618	cmss1	80	79.060	Poecilia_reticulata
ENSAOCG00000013361	cmss1	100	51.485	ENSPPYG00000013606	CMSS1	100	50.825	Pongo_abelii
ENSAOCG00000013361	cmss1	100	53.020	ENSPCOG00000020035	CMSS1	100	53.633	Propithecus_coquereli
ENSAOCG00000013361	cmss1	100	44.558	ENSPVAG00000017031	CMSS1	100	44.218	Pteropus_vampyrus
ENSAOCG00000013361	cmss1	91	78.491	ENSPNYG00000013428	cmss1	97	78.491	Pundamilia_nyererei
ENSAOCG00000013361	cmss1	100	61.224	ENSPNAG00000007912	cmss1	100	56.122	Pygocentrus_nattereri
ENSAOCG00000013361	cmss1	70	63.861	ENSRNOG00000027888	Cmss1	79	63.861	Rattus_norvegicus
ENSAOCG00000013361	cmss1	100	52.542	ENSRBIG00000037931	CMSS1	100	50.853	Rhinopithecus_bieti
ENSAOCG00000013361	cmss1	100	52.542	ENSRROG00000042910	CMSS1	100	50.853	Rhinopithecus_roxellana
ENSAOCG00000013361	cmss1	83	58.333	ENSSBOG00000030980	CMSS1	77	64.356	Saimiri_boliviensis_boliviensis
ENSAOCG00000013361	cmss1	70	63.861	ENSSHAG00000009321	CMSS1	80	63.861	Sarcophilus_harrisii
ENSAOCG00000013361	cmss1	100	63.448	ENSSFOG00015001509	cmss1	100	61.724	Scleropages_formosus
ENSAOCG00000013361	cmss1	100	75.945	ENSSMAG00000001653	cmss1	100	73.973	Scophthalmus_maximus
ENSAOCG00000013361	cmss1	100	85.567	ENSSDUG00000007719	cmss1	100	84.192	Seriola_dumerili
ENSAOCG00000013361	cmss1	94	79.152	ENSSLDG00000012300	cmss1	73	88.068	Seriola_lalandi_dorsalis
ENSAOCG00000013361	cmss1	100	43.667	ENSSARG00000003584	CMSS1	100	43.599	Sorex_araneus
ENSAOCG00000013361	cmss1	77	59.459	ENSSPUG00000003865	CMSS1	89	61.386	Sphenodon_punctatus
ENSAOCG00000013361	cmss1	94	83.150	ENSSPAG00000019182	cmss1	63	93.103	Stegastes_partitus
ENSAOCG00000013361	cmss1	100	52.941	ENSSSCG00000011970	CMSS1	100	52.595	Sus_scrofa
ENSAOCG00000013361	cmss1	76	61.187	ENSTGUG00000013635	CMSS1	88	62.376	Taeniopygia_guttata
ENSAOCG00000013361	cmss1	100	73.356	ENSTRUG00000015265	cmss1	100	71.626	Takifugu_rubripes
ENSAOCG00000013361	cmss1	93	67.164	ENSTNIG00000002880	cmss1	74	75.369	Tetraodon_nigroviridis
ENSAOCG00000013361	cmss1	100	38.408	ENSTBEG00000016722	CMSS1	72	45.050	Tupaia_belangeri
ENSAOCG00000013361	cmss1	100	52.901	ENSTTRG00000001562	CMSS1	100	50.690	Tursiops_truncatus
ENSAOCG00000013361	cmss1	70	64.851	ENSUAMG00000024209	CMSS1	91	64.851	Ursus_americanus
ENSAOCG00000013361	cmss1	70	64.851	ENSUMAG00000001983	CMSS1	78	64.851	Ursus_maritimus
ENSAOCG00000013361	cmss1	55	63.750	ENSVPAG00000000263	CMSS1	57	63.750	Vicugna_pacos
ENSAOCG00000013361	cmss1	70	63.861	ENSVVUG00000007776	-	80	63.861	Vulpes_vulpes
ENSAOCG00000013361	cmss1	69	64.500	ENSVVUG00000021647	-	82	64.851	Vulpes_vulpes
ENSAOCG00000013361	cmss1	100	53.633	ENSXETG00000011858	cmss1	100	51.903	Xenopus_tropicalis
ENSAOCG00000013361	cmss1	95	74.820	ENSXCOG00000018724	cmss1	70	85.222	Xiphophorus_couchianus
ENSAOCG00000013361	cmss1	92	75.093	ENSXMAG00000011243	cmss1	76	85.222	Xiphophorus_maculatus