EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAOCG00000013497 (Gene tree)
Gene ID: 111574185
Gene Symbol: -
Alias: -
Full Name: RNA-binding protein 38-like
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Minus strand
Length: 25735 bases
Position: chrNXFZ01002966.1:5559-31293
Accession: 111574185
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000025727	RRM_1	PF00076.22	3.6e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000016098	-	2282	XM_023278622	ENSAOCP00000025727	249 (aa)	XP_023134390	UPI000C30F6BA

Gene Model

Click here to download ENSAOCG00000013497's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000013497's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAOCG00000013497	-	94	64.435	ENSAOCG00000012559	RBM38	98	66.250
ENSAOCG00000013497	-	72	30.693	ENSAOCG00000003804	MSI1	80	30.693
ENSAOCG00000013497	-	54	74.815	ENSAOCG00000000378	rbm24a	100	55.378
ENSAOCG00000013497	-	62	69.375	ENSAOCG00000023764	rbm24b	100	56.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000013497	-	91	59.052	ENSG00000132819	RBM38	94	82.051	Homo_sapiens
ENSAOCG00000013497	-	98	65.476	ENSAPOG00000009939	-	100	66.798	Acanthochromis_polyacanthus
ENSAOCG00000013497	-	100	99.598	ENSAPOG00000003301	rbm38	100	99.598	Acanthochromis_polyacanthus
ENSAOCG00000013497	-	98	64.940	ENSACIG00000012502	-	100	84.615	Amphilophus_citrinellus
ENSAOCG00000013497	-	100	94.400	ENSACIG00000000010	rbm38	100	94.400	Amphilophus_citrinellus
ENSAOCG00000013497	-	98	64.683	ENSAPEG00000023581	-	100	65.079	Amphiprion_percula
ENSAOCG00000013497	-	100	100.000	ENSAPEG00000013137	rbm38	100	100.000	Amphiprion_percula
ENSAOCG00000013497	-	100	92.000	ENSATEG00000016366	rbm38	100	92.000	Anabas_testudineus
ENSAOCG00000013497	-	98	65.339	ENSATEG00000016710	-	100	65.354	Anabas_testudineus
ENSAOCG00000013497	-	93	58.650	ENSACAG00000016238	RBM38	90	58.650	Anolis_carolinensis
ENSAOCG00000013497	-	93	59.072	ENSANAG00000031959	RBM38	81	85.859	Aotus_nancymaae
ENSAOCG00000013497	-	98	64.567	ENSACLG00000019514	-	100	64.567	Astatotilapia_calliptera
ENSAOCG00000013497	-	98	61.044	ENSAMXG00000015601	-	100	61.446	Astyanax_mexicanus
ENSAOCG00000013497	-	95	56.540	ENSAMXG00000038120	rbm38	96	56.540	Astyanax_mexicanus
ENSAOCG00000013497	-	91	59.483	ENSBTAG00000008105	RBM38	89	59.483	Bos_taurus
ENSAOCG00000013497	-	58	59.310	WBGene00006321	sup-12	68	71.569	Caenorhabditis_elegans
ENSAOCG00000013497	-	91	58.621	ENSCJAG00000019139	RBM38	81	85.859	Callithrix_jacchus
ENSAOCG00000013497	-	93	59.072	ENSCAFG00020021943	RBM38	90	59.072	Canis_lupus_dingo
ENSAOCG00000013497	-	91	58.621	ENSCHIG00000002609	RBM38	89	58.621	Capra_hircus
ENSAOCG00000013497	-	91	59.914	ENSCPOG00000012781	RBM38	89	59.914	Cavia_porcellus
ENSAOCG00000013497	-	91	58.621	ENSCCAG00000036872	RBM38	81	85.859	Cebus_capucinus
ENSAOCG00000013497	-	91	59.483	ENSCATG00000032133	RBM38	81	85.859	Cercocebus_atys
ENSAOCG00000013497	-	93	59.072	ENSCLAG00000005906	RBM38	94	59.072	Chinchilla_lanigera
ENSAOCG00000013497	-	91	59.483	ENSCSAG00000015503	RBM38	89	59.483	Chlorocebus_sabaeus
ENSAOCG00000013497	-	93	59.244	ENSCPBG00000024059	RBM38	100	59.244	Chrysemys_picta_bellii
ENSAOCG00000013497	-	60	62.893	ENSCING00000025102	-	66	62.893	Ciona_intestinalis
ENSAOCG00000013497	-	74	48.182	ENSCSAVG00000001132	-	58	60.127	Ciona_savignyi
ENSAOCG00000013497	-	94	46.383	ENSCANG00000030105	-	80	46.383	Colobus_angolensis_palliatus
ENSAOCG00000013497	-	72	65.574	ENSCGRG00001012928	Rbm38	89	58.621	Cricetulus_griseus_chok1gshd
ENSAOCG00000013497	-	98	64.542	ENSCSEG00000004701	-	100	64.567	Cynoglossus_semilaevis
ENSAOCG00000013497	-	84	69.856	ENSCSEG00000020943	rbm38	68	69.856	Cynoglossus_semilaevis
ENSAOCG00000013497	-	98	64.542	ENSCVAG00000005472	-	100	65.737	Cyprinodon_variegatus
ENSAOCG00000013497	-	100	88.000	ENSCVAG00000015952	rbm38	100	88.000	Cyprinodon_variegatus
ENSAOCG00000013497	-	98	65.587	ENSDARG00000058818	rbm38	100	65.587	Danio_rerio
ENSAOCG00000013497	-	93	57.384	ENSDNOG00000032004	RBM38	100	57.384	Dasypus_novemcinctus
ENSAOCG00000013497	-	91	58.190	ENSECAG00000007700	RBM38	89	58.190	Equus_caballus
ENSAOCG00000013497	-	91	60.173	ENSEEUG00000013489	RBM38	89	61.039	Erinaceus_europaeus
ENSAOCG00000013497	-	98	65.490	ENSELUG00000005849	-	100	65.490	Esox_lucius
ENSAOCG00000013497	-	92	73.913	ENSELUG00000000585	-	100	73.913	Esox_lucius
ENSAOCG00000013497	-	91	58.621	ENSFCAG00000042916	RBM38	81	84.848	Felis_catus
ENSAOCG00000013497	-	70	70.225	ENSFALG00000010805	RBM38	90	69.492	Ficedula_albicollis
ENSAOCG00000013497	-	100	88.446	ENSFHEG00000017748	rbm38	100	88.446	Fundulus_heteroclitus
ENSAOCG00000013497	-	98	61.600	ENSFHEG00000006160	-	100	62.353	Fundulus_heteroclitus
ENSAOCG00000013497	-	76	70.157	ENSGMOG00000016655	-	100	73.298	Gadus_morhua
ENSAOCG00000013497	-	93	58.403	ENSGALG00000026081	RBM38	100	57.806	Gallus_gallus
ENSAOCG00000013497	-	93	63.136	ENSGACG00000009873	-	100	63.136	Gasterosteus_aculeatus
ENSAOCG00000013497	-	93	81.897	ENSGACG00000015224	rbm38	100	81.897	Gasterosteus_aculeatus
ENSAOCG00000013497	-	93	59.244	ENSGAGG00000001187	RBM38	100	59.244	Gopherus_agassizii
ENSAOCG00000013497	-	98	64.567	ENSHBUG00000011778	-	100	64.567	Haplochromis_burtoni
ENSAOCG00000013497	-	100	94.400	ENSHBUG00000012058	rbm38	100	94.400	Haplochromis_burtoni
ENSAOCG00000013497	-	93	59.072	ENSHGLG00000015077	RBM38	90	59.072	Heterocephalus_glaber_female
ENSAOCG00000013497	-	86	67.130	ENSHCOG00000005622	-	60	68.056	Hippocampus_comes
ENSAOCG00000013497	-	100	64.542	ENSHCOG00000019040	rbm38	100	64.542	Hippocampus_comes
ENSAOCG00000013497	-	98	60.241	ENSIPUG00000019349	-	100	60.241	Ictalurus_punctatus
ENSAOCG00000013497	-	91	76.923	ENSKMAG00000012402	rbm38	99	76.923	Kryptolebias_marmoratus
ENSAOCG00000013497	-	100	92.800	ENSLBEG00000018878	rbm38	100	92.800	Labrus_bergylta
ENSAOCG00000013497	-	98	64.800	ENSLBEG00000016163	RBM38	100	65.234	Labrus_bergylta
ENSAOCG00000013497	-	98	64.516	ENSLOCG00000003456	rbm38	100	64.516	Lepisosteus_oculatus
ENSAOCG00000013497	-	91	59.483	ENSMFAG00000043808	RBM38	81	85.859	Macaca_fascicularis
ENSAOCG00000013497	-	91	59.483	ENSMMUG00000031391	RBM38	81	85.859	Macaca_mulatta
ENSAOCG00000013497	-	91	59.483	ENSMNEG00000034683	RBM38	81	85.859	Macaca_nemestrina
ENSAOCG00000013497	-	98	67.068	ENSMAMG00000020499	RBM38	100	67.589	Mastacembelus_armatus
ENSAOCG00000013497	-	100	94.800	ENSMAMG00000024135	rbm38	100	94.800	Mastacembelus_armatus
ENSAOCG00000013497	-	98	64.567	ENSMZEG00005000849	-	100	64.567	Maylandia_zebra
ENSAOCG00000013497	-	100	94.400	ENSMZEG00005026036	rbm38	100	94.400	Maylandia_zebra
ENSAOCG00000013497	-	72	66.120	ENSMAUG00000021211	Rbm38	89	59.483	Mesocricetus_auratus
ENSAOCG00000013497	-	93	58.723	ENSMICG00000038011	RBM38	100	58.723	Microcebus_murinus
ENSAOCG00000013497	-	72	66.120	ENSMOCG00000008715	Rbm38	89	59.483	Microtus_ochrogaster
ENSAOCG00000013497	-	98	65.079	ENSMMOG00000020051	-	100	65.490	Mola_mola
ENSAOCG00000013497	-	95	56.432	ENSMODG00000016458	RBM38	94	56.432	Monodelphis_domestica
ENSAOCG00000013497	-	76	75.263	ENSMALG00000004680	RBM38	84	67.556	Monopterus_albus
ENSAOCG00000013497	-	100	76.400	ENSMALG00000022327	rbm38	100	77.200	Monopterus_albus
ENSAOCG00000013497	-	91	58.621	MGP_CAROLIEiJ_G0024745	Rbm38	89	58.621	Mus_caroli
ENSAOCG00000013497	-	91	58.621	ENSMUSG00000027510	Rbm38	89	58.621	Mus_musculus
ENSAOCG00000013497	-	91	58.621	MGP_PahariEiJ_G0026186	Rbm38	89	58.621	Mus_pahari
ENSAOCG00000013497	-	91	58.621	MGP_SPRETEiJ_G0025665	Rbm38	89	58.621	Mus_spretus
ENSAOCG00000013497	-	74	65.426	ENSMPUG00000006518	RBM38	98	63.415	Mustela_putorius_furo
ENSAOCG00000013497	-	91	58.547	ENSMLUG00000011140	RBM38	98	58.547	Myotis_lucifugus
ENSAOCG00000013497	-	98	64.567	ENSNBRG00000022545	-	100	64.567	Neolamprologus_brichardi
ENSAOCG00000013497	-	100	94.000	ENSNBRG00000022685	rbm38	100	94.000	Neolamprologus_brichardi
ENSAOCG00000013497	-	91	60.345	ENSODEG00000007980	RBM38	89	60.345	Octodon_degus
ENSAOCG00000013497	-	98	64.427	ENSONIG00000020324	-	100	64.427	Oreochromis_niloticus
ENSAOCG00000013497	-	98	94.694	ENSONIG00000017073	rbm38	100	94.694	Oreochromis_niloticus
ENSAOCG00000013497	-	91	57.328	ENSOANG00000009259	RBM38	74	63.776	Ornithorhynchus_anatinus
ENSAOCG00000013497	-	98	62.846	ENSORLG00000027180	-	100	63.780	Oryzias_latipes
ENSAOCG00000013497	-	100	84.861	ENSORLG00000012154	rbm38	100	84.861	Oryzias_latipes
ENSAOCG00000013497	-	100	85.657	ENSORLG00020017871	rbm38	100	85.657	Oryzias_latipes_hni
ENSAOCG00000013497	-	100	62.257	ENSORLG00020020751	-	100	63.780	Oryzias_latipes_hni
ENSAOCG00000013497	-	98	63.492	ENSORLG00015017040	-	100	64.173	Oryzias_latipes_hsok
ENSAOCG00000013497	-	100	85.657	ENSORLG00015012606	rbm38	100	85.657	Oryzias_latipes_hsok
ENSAOCG00000013497	-	98	63.745	ENSOMEG00000023912	-	100	64.143	Oryzias_melastigma
ENSAOCG00000013497	-	100	85.657	ENSOMEG00000006805	rbm38	100	85.657	Oryzias_melastigma
ENSAOCG00000013497	-	91	59.483	ENSOGAG00000029136	RBM38	88	59.483	Otolemur_garnettii
ENSAOCG00000013497	-	91	58.621	ENSPPRG00000009507	RBM38	81	84.848	Panthera_pardus
ENSAOCG00000013497	-	50	80.000	ENSPTRG00000045845	-	68	80.000	Pan_troglodytes
ENSAOCG00000013497	-	76	64.583	ENSPTRG00000013661	RBM38	81	85.859	Pan_troglodytes
ENSAOCG00000013497	-	95	47.521	ENSPANG00000033127	-	93	47.521	Papio_anubis
ENSAOCG00000013497	-	91	59.483	ENSPANG00000020919	-	81	85.859	Papio_anubis
ENSAOCG00000013497	-	98	60.317	ENSPKIG00000025417	rbm38	100	61.905	Paramormyrops_kingsleyae
ENSAOCG00000013497	-	98	60.643	ENSPKIG00000018122	-	100	81.197	Paramormyrops_kingsleyae
ENSAOCG00000013497	-	93	57.806	ENSPSIG00000011649	RBM38	92	57.806	Pelodiscus_sinensis
ENSAOCG00000013497	-	98	62.205	ENSPMGG00000017094	-	100	62.205	Periophthalmus_magnuspinnatus
ENSAOCG00000013497	-	100	80.478	ENSPMGG00000011343	rbm38	100	83.267	Periophthalmus_magnuspinnatus
ENSAOCG00000013497	-	95	56.846	ENSPCIG00000013648	RBM38	94	56.846	Phascolarctos_cinereus
ENSAOCG00000013497	-	100	90.157	ENSPFOG00000011658	rbm38	100	90.157	Poecilia_formosa
ENSAOCG00000013497	-	98	63.529	ENSPLAG00000002500	-	100	64.800	Poecilia_latipinna
ENSAOCG00000013497	-	100	89.764	ENSPLAG00000005218	rbm38	100	89.764	Poecilia_latipinna
ENSAOCG00000013497	-	100	89.764	ENSPMEG00000015770	rbm38	100	89.764	Poecilia_mexicana
ENSAOCG00000013497	-	100	89.764	ENSPREG00000007398	rbm38	100	89.764	Poecilia_reticulata
ENSAOCG00000013497	-	91	59.565	ENSPCOG00000026201	RBM38	84	83.495	Propithecus_coquereli
ENSAOCG00000013497	-	76	40.838	ENSPVAG00000006457	RBM38	92	38.750	Pteropus_vampyrus
ENSAOCG00000013497	-	98	64.567	ENSPNYG00000019727	-	100	84.615	Pundamilia_nyererei
ENSAOCG00000013497	-	100	94.000	ENSPNYG00000021373	rbm38	100	94.000	Pundamilia_nyererei
ENSAOCG00000013497	-	81	67.488	ENSPNAG00000010596	rbm38	84	67.488	Pygocentrus_nattereri
ENSAOCG00000013497	-	98	62.651	ENSPNAG00000015123	-	91	82.203	Pygocentrus_nattereri
ENSAOCG00000013497	-	91	59.914	ENSRNOG00000006420	Rbm38	89	59.914	Rattus_norvegicus
ENSAOCG00000013497	-	93	52.137	ENSRROG00000036388	-	89	52.137	Rhinopithecus_roxellana
ENSAOCG00000013497	-	93	58.228	ENSSBOG00000031053	RBM38	92	85.859	Saimiri_boliviensis_boliviensis
ENSAOCG00000013497	-	98	58.635	ENSSFOG00015004453	rbm38	100	62.651	Scleropages_formosus
ENSAOCG00000013497	-	100	96.000	ENSSDUG00000022611	rbm38	100	96.000	Seriola_dumerili
ENSAOCG00000013497	-	98	65.079	ENSSDUG00000021082	RBM38	100	65.490	Seriola_dumerili
ENSAOCG00000013497	-	98	65.079	ENSSLDG00000011778	RBM38	100	65.490	Seriola_lalandi_dorsalis
ENSAOCG00000013497	-	100	96.000	ENSSLDG00000010845	rbm38	100	96.000	Seriola_lalandi_dorsalis
ENSAOCG00000013497	-	98	65.873	ENSSPAG00000020989	RBM38	100	65.873	Stegastes_partitus
ENSAOCG00000013497	-	100	99.200	ENSSPAG00000011113	rbm38	100	99.200	Stegastes_partitus
ENSAOCG00000013497	-	91	59.483	ENSSSCG00000007504	RBM38	89	59.483	Sus_scrofa
ENSAOCG00000013497	-	100	85.200	ENSTRUG00000024954	rbm38	100	85.600	Takifugu_rubripes
ENSAOCG00000013497	-	98	63.241	ENSTRUG00000019869	-	100	64.286	Takifugu_rubripes
ENSAOCG00000013497	-	93	66.667	ENSTNIG00000007093	-	100	66.667	Tetraodon_nigroviridis
ENSAOCG00000013497	-	91	59.052	ENSUAMG00000019780	RBM38	90	58.650	Ursus_americanus
ENSAOCG00000013497	-	93	59.072	ENSVVUG00000017246	RBM38	90	59.072	Vulpes_vulpes
ENSAOCG00000013497	-	77	62.564	ENSXETG00000011268	rbm38	99	56.432	Xenopus_tropicalis
ENSAOCG00000013497	-	84	54.709	ENSXCOG00000017324	-	99	54.709	Xiphophorus_couchianus
ENSAOCG00000013497	-	100	91.200	ENSXMAG00000023662	rbm38	100	91.200	Xiphophorus_maculatus