EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAOCG00000013505 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: zinc finger protein 883-like
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Minus strand
Length: 4067 bases
Position: chrNXFZ01002236.1:93962-98028
Accession: 111568842
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000009387	zf-C2H2	PF00096.26	1.4e-26	1	3
ENSAOCP00000009387	zf-C2H2	PF00096.26	1.4e-26	2	3
ENSAOCP00000009387	zf-C2H2	PF00096.26	1.4e-26	3	3
ENSAOCP00000009387	zf-met	PF12874.7	4.3e-07	1	2
ENSAOCP00000009387	zf-met	PF12874.7	4.3e-07	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000016104	-	1858	XM_023270682	ENSAOCP00000009387	485 (aa)	XP_023126450	-

Gene Model

Click here to download ENSAOCG00000013505's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000013505's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAOCG00000013505	-	64	40.476	ENSAOCG00000022375	-	85	40.476
ENSAOCG00000013505	-	72	33.083	ENSAOCG00000017968	snai2	55	33.571
ENSAOCG00000013505	-	50	45.390	ENSAOCG00000013130	-	78	45.390
ENSAOCG00000013505	-	56	30.935	ENSAOCG00000010173	znf407	53	31.364
ENSAOCG00000013505	-	56	38.384	ENSAOCG00000004564	-	89	38.384
ENSAOCG00000013505	-	50	33.065	ENSAOCG00000007388	-	58	33.473
ENSAOCG00000013505	-	50	37.719	ENSAOCG00000000655	-	53	37.719
ENSAOCG00000013505	-	56	48.913	ENSAOCG00000015369	-	96	44.444
ENSAOCG00000013505	-	57	30.769	ENSAOCG00000018684	si:dkey-89b17.4	52	36.585
ENSAOCG00000013505	-	64	37.553	ENSAOCG00000013710	-	83	37.553
ENSAOCG00000013505	-	56	35.178	ENSAOCG00000012903	-	75	35.178
ENSAOCG00000013505	-	56	40.336	ENSAOCG00000014806	prdm5	67	40.167
ENSAOCG00000013505	-	51	38.942	ENSAOCG00000010498	-	55	38.462
ENSAOCG00000013505	-	68	38.235	ENSAOCG00000007134	-	71	35.294
ENSAOCG00000013505	-	50	35.385	ENSAOCG00000022276	-	95	35.714
ENSAOCG00000013505	-	50	36.752	ENSAOCG00000013934	-	57	36.709
ENSAOCG00000013505	-	51	36.723	ENSAOCG00000005450	ZNF319	87	36.723
ENSAOCG00000013505	-	56	40.171	ENSAOCG00000001341	-	90	40.171
ENSAOCG00000013505	-	52	33.813	ENSAOCG00000014165	-	81	35.802
ENSAOCG00000013505	-	61	32.780	ENSAOCG00000015944	-	72	31.535
ENSAOCG00000013505	-	53	36.948	ENSAOCG00000007045	-	83	37.447
ENSAOCG00000013505	-	67	44.348	ENSAOCG00000022675	-	91	44.348
ENSAOCG00000013505	-	51	38.194	ENSAOCG00000018543	-	77	38.194
ENSAOCG00000013505	-	66	34.483	ENSAOCG00000013578	-	74	41.558
ENSAOCG00000013505	-	51	45.390	ENSAOCG00000020830	-	93	45.390
ENSAOCG00000013505	-	73	35.602	ENSAOCG00000018484	-	94	38.819
ENSAOCG00000013505	-	70	40.278	ENSAOCG00000016287	-	76	40.278
ENSAOCG00000013505	-	66	36.437	ENSAOCG00000022079	-	76	36.437
ENSAOCG00000013505	-	51	45.882	ENSAOCG00000013124	-	61	45.882
ENSAOCG00000013505	-	98	36.019	ENSAOCG00000019475	-	95	32.463
ENSAOCG00000013505	-	66	37.607	ENSAOCG00000018307	-	87	39.662
ENSAOCG00000013505	-	51	44.118	ENSAOCG00000002585	-	62	44.118
ENSAOCG00000013505	-	50	38.462	ENSAOCG00000002795	-	59	38.462
ENSAOCG00000013505	-	54	37.766	ENSAOCG00000001327	-	91	37.766
ENSAOCG00000013505	-	51	37.931	ENSAOCG00000019850	si:ch211-216l23.1	69	37.931
ENSAOCG00000013505	-	65	36.161	ENSAOCG00000022459	-	89	37.712
ENSAOCG00000013505	-	59	37.975	ENSAOCG00000012653	-	82	37.975
ENSAOCG00000013505	-	50	38.034	ENSAOCG00000015586	-	87	40.132
ENSAOCG00000013505	-	60	45.139	ENSAOCG00000016737	-	95	34.188
ENSAOCG00000013505	-	55	33.673	ENSAOCG00000012813	-	73	33.673
ENSAOCG00000013505	-	54	37.975	ENSAOCG00000017595	-	61	39.827
ENSAOCG00000013505	-	61	34.783	ENSAOCG00000008304	zbtb48	50	34.783
ENSAOCG00000013505	-	54	40.678	ENSAOCG00000022283	-	87	40.928
ENSAOCG00000013505	-	72	36.889	ENSAOCG00000013978	-	90	37.736
ENSAOCG00000013505	-	55	33.654	ENSAOCG00000013656	-	68	35.193
ENSAOCG00000013505	-	55	37.113	ENSAOCG00000012823	-	50	37.500
ENSAOCG00000013505	-	67	43.333	ENSAOCG00000012829	-	60	43.333
ENSAOCG00000013505	-	50	37.857	ENSAOCG00000016409	-	60	38.136
ENSAOCG00000013505	-	53	35.271	ENSAOCG00000015987	-	66	35.271
ENSAOCG00000013505	-	61	31.535	ENSAOCG00000014769	-	80	31.535
ENSAOCG00000013505	-	63	44.262	ENSAOCG00000022004	znf236	64	44.262
ENSAOCG00000013505	-	54	35.294	ENSAOCG00000013589	-	93	35.450
ENSAOCG00000013505	-	53	36.134	ENSAOCG00000024275	GZF1	50	36.134
ENSAOCG00000013505	-	50	38.168	ENSAOCG00000017602	-	65	40.506
ENSAOCG00000013505	-	59	32.661	ENSAOCG00000014818	znf319b	78	32.917

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000013505	-	100	89.117	ENSAPOG00000001563	-	95	95.397	Acanthochromis_polyacanthus
ENSAOCG00000013505	-	50	83.182	ENSACIG00000015411	-	84	83.486	Amphilophus_citrinellus
ENSAOCG00000013505	-	100	97.325	ENSAPEG00000022756	-	100	97.325	Amphiprion_percula
ENSAOCG00000013505	-	54	34.320	ENSAPEG00000022774	-	86	35.673	Amphiprion_percula
ENSAOCG00000013505	-	99	63.008	ENSATEG00000019284	-	93	61.000	Anabas_testudineus
ENSAOCG00000013505	-	54	43.103	ENSACLG00000008624	-	74	43.103	Astatotilapia_calliptera
ENSAOCG00000013505	-	99	55.110	ENSCSEG00000008903	-	82	81.933	Cynoglossus_semilaevis
ENSAOCG00000013505	-	73	65.608	ENSCVAG00000016534	-	77	63.228	Cyprinodon_variegatus
ENSAOCG00000013505	-	50	64.167	ENSGMOG00000000494	-	97	64.167	Gadus_morhua
ENSAOCG00000013505	-	91	58.963	ENSGAFG00000002659	-	90	54.701	Gambusia_affinis
ENSAOCG00000013505	-	54	87.764	ENSGACG00000001377	-	92	87.764	Gasterosteus_aculeatus
ENSAOCG00000013505	-	100	57.400	ENSHCOG00000000511	-	96	57.200	Hippocampus_comes
ENSAOCG00000013505	-	94	46.606	ENSLBEG00000018509	-	91	82.237	Labrus_bergylta
ENSAOCG00000013505	-	99	64.728	ENSMAMG00000018137	-	94	62.915	Mastacembelus_armatus
ENSAOCG00000013505	-	61	82.778	ENSMMOG00000009733	-	96	82.778	Mola_mola
ENSAOCG00000013505	-	64	87.019	ENSNBRG00000008223	-	83	87.019	Neolamprologus_brichardi
ENSAOCG00000013505	-	63	86.017	ENSONIG00000017233	-	99	86.017	Oreochromis_niloticus
ENSAOCG00000013505	-	72	76.569	ENSOMEG00000016463	-	78	76.569	Oryzias_melastigma
ENSAOCG00000013505	-	90	59.649	ENSPFOG00000006287	-	96	57.174	Poecilia_formosa
ENSAOCG00000013505	-	92	55.085	ENSPLAG00000003412	-	97	54.526	Poecilia_latipinna
ENSAOCG00000013505	-	98	56.859	ENSPMEG00000005897	-	95	54.134	Poecilia_mexicana
ENSAOCG00000013505	-	51	82.258	ENSPREG00000021246	-	91	82.427	Poecilia_reticulata
ENSAOCG00000013505	-	65	85.417	ENSPNYG00000023088	-	67	85.774	Pundamilia_nyererei
ENSAOCG00000013505	-	99	63.024	ENSSDUG00000004892	-	96	62.545	Seriola_dumerili
ENSAOCG00000013505	-	52	89.370	ENSSLDG00000005670	-	90	90.377	Seriola_lalandi_dorsalis
ENSAOCG00000013505	-	76	42.735	ENSSPAG00000022219	-	84	42.735	Stegastes_partitus
ENSAOCG00000013505	-	91	59.740	ENSXMAG00000000866	-	81	58.209	Xiphophorus_maculatus