EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAOCG00000013538 (Gene tree)
Gene ID: 111580485
Gene Symbol: smg7
Alias: fa99h10|wu:fa99h10
Full Name: SMG7%2C nonsense mediated mRNA decay factor
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Plus strand
Length: 31265 bases
Position: chrNXFZ01003585.1:96904-128168
Accession: 111580485
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000025705	EST1	PF10374.9	1.6e-25	1	1
ENSAOCP00000025725	EST1	PF10374.9	1.7e-25	1	1
ENSAOCP00000025705	EST1_DNA_bind	PF10373.9	2.7e-49	1	1
ENSAOCP00000025725	EST1_DNA_bind	PF10373.9	2.9e-49	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000029385	-	7220	XM_023288244	ENSAOCP00000025705	1145 (aa)	XP_023144012	UPI000C313770
ENSAOCT00000029395	-	7370	XM_023288243	ENSAOCP00000025725	1195 (aa)	XP_023144011	UPI000C30325E

Gene Model

Click here to download ENSAOCG00000013538's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000013538's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000013538	smg7	99	66.838	ENSG00000116698	SMG7	86	94.340	Homo_sapiens
ENSAOCG00000013538	smg7	89	97.321	ENSAPOG00000009611	smg7	96	97.321	Acanthochromis_polyacanthus
ENSAOCG00000013538	smg7	99	66.010	ENSAMEG00000002357	SMG7	100	64.552	Ailuropoda_melanoleuca
ENSAOCG00000013538	smg7	97	87.007	ENSACIG00000015152	smg7	100	85.573	Amphilophus_citrinellus
ENSAOCG00000013538	smg7	100	99.415	ENSAPEG00000007851	smg7	100	99.415	Amphiprion_percula
ENSAOCG00000013538	smg7	100	93.328	ENSATEG00000006931	smg7	95	96.127	Anabas_testudineus
ENSAOCG00000013538	smg7	99	66.239	ENSAPLG00000015811	SMG7	99	65.810	Anas_platyrhynchos
ENSAOCG00000013538	smg7	99	65.987	ENSACAG00000014989	SMG7	99	65.196	Anolis_carolinensis
ENSAOCG00000013538	smg7	99	66.638	ENSANAG00000028114	SMG7	85	92.994	Aotus_nancymaae
ENSAOCG00000013538	smg7	100	92.803	ENSACLG00000022079	smg7	100	90.711	Astatotilapia_calliptera
ENSAOCG00000013538	smg7	100	78.453	ENSAMXG00000020809	smg7	100	77.537	Astyanax_mexicanus
ENSAOCG00000013538	smg7	99	66.581	ENSBTAG00000008003	SMG7	97	62.273	Bos_taurus
ENSAOCG00000013538	smg7	99	66.354	ENSCJAG00000005135	SMG7	85	94.194	Callithrix_jacchus
ENSAOCG00000013538	smg7	99	64.421	ENSCAFG00000013276	SMG7	97	63.846	Canis_familiaris
ENSAOCG00000013538	smg7	99	65.588	ENSCAFG00020015475	SMG7	89	90.244	Canis_lupus_dingo
ENSAOCG00000013538	smg7	100	65.053	ENSCHIG00000018192	SMG7	99	64.860	Capra_hircus
ENSAOCG00000013538	smg7	99	66.838	ENSTSYG00000002667	SMG7	80	94.194	Carlito_syrichta
ENSAOCG00000013538	smg7	99	64.503	ENSCPOG00000008906	SMG7	99	63.336	Cavia_porcellus
ENSAOCG00000013538	smg7	99	66.809	ENSCCAG00000028596	SMG7	85	92.994	Cebus_capucinus
ENSAOCG00000013538	smg7	99	66.923	ENSCATG00000011063	SMG7	85	92.994	Cercocebus_atys
ENSAOCG00000013538	smg7	99	66.838	ENSCLAG00000010751	SMG7	99	66.210	Chinchilla_lanigera
ENSAOCG00000013538	smg7	99	65.353	ENSCSAG00000012654	SMG7	97	64.914	Chlorocebus_sabaeus
ENSAOCG00000013538	smg7	92	58.519	ENSCHOG00000010522	SMG7	93	58.341	Choloepus_hoffmanni
ENSAOCG00000013538	smg7	99	67.404	ENSCPBG00000015724	SMG7	99	67.037	Chrysemys_picta_bellii
ENSAOCG00000013538	smg7	99	66.810	ENSCANG00000015680	SMG7	85	92.994	Colobus_angolensis_palliatus
ENSAOCG00000013538	smg7	99	65.983	ENSCGRG00001013705	Smg7	99	65.641	Cricetulus_griseus_chok1gshd
ENSAOCG00000013538	smg7	99	65.837	ENSCGRG00000018401	Smg7	100	65.494	Cricetulus_griseus_crigri
ENSAOCG00000013538	smg7	99	85.046	ENSCVAG00000011842	smg7	100	88.177	Cyprinodon_variegatus
ENSAOCG00000013538	smg7	100	78.138	ENSDARG00000060767	smg7	100	78.257	Danio_rerio
ENSAOCG00000013538	smg7	99	65.074	ENSDORG00000007331	Smg7	99	64.551	Dipodomys_ordii
ENSAOCG00000013538	smg7	97	64.159	ENSETEG00000002654	SMG7	99	64.146	Echinops_telfairi
ENSAOCG00000013538	smg7	99	65.733	ENSEASG00005006524	SMG7	99	65.404	Equus_asinus_asinus
ENSAOCG00000013538	smg7	94	88.358	ENSECAG00000004313	SMG7	97	88.131	Equus_caballus
ENSAOCG00000013538	smg7	97	64.261	ENSEEUG00000002024	SMG7	94	64.007	Erinaceus_europaeus
ENSAOCG00000013538	smg7	100	79.671	ENSELUG00000010293	smg7	98	82.320	Esox_lucius
ENSAOCG00000013538	smg7	99	65.296	ENSFCAG00000010900	SMG7	99	68.900	Felis_catus
ENSAOCG00000013538	smg7	99	65.008	ENSFALG00000003047	SMG7	61	74.037	Ficedula_albicollis
ENSAOCG00000013538	smg7	99	65.182	ENSFDAG00000012121	SMG7	99	64.500	Fukomys_damarensis
ENSAOCG00000013538	smg7	100	84.875	ENSFHEG00000011073	smg7	100	84.489	Fundulus_heteroclitus
ENSAOCG00000013538	smg7	89	81.015	ENSGMOG00000004916	smg7	91	81.015	Gadus_morhua
ENSAOCG00000013538	smg7	99	66.326	ENSGALG00000004667	SMG7	99	66.183	Gallus_gallus
ENSAOCG00000013538	smg7	100	83.969	ENSGAFG00000019000	smg7	100	83.088	Gambusia_affinis
ENSAOCG00000013538	smg7	97	85.600	ENSGACG00000001634	smg7	99	84.000	Gasterosteus_aculeatus
ENSAOCG00000013538	smg7	99	66.838	ENSGGOG00000002342	SMG7	82	91.875	Gorilla_gorilla
ENSAOCG00000013538	smg7	100	92.887	ENSHBUG00000003726	smg7	100	90.879	Haplochromis_burtoni
ENSAOCG00000013538	smg7	99	66.838	ENSHGLG00000009353	SMG7	99	66.382	Heterocephalus_glaber_female
ENSAOCG00000013538	smg7	99	66.752	ENSHGLG00100009637	-	99	66.296	Heterocephalus_glaber_male
ENSAOCG00000013538	smg7	99	59.524	ENSHGLG00100004878	-	99	59.143	Heterocephalus_glaber_male
ENSAOCG00000013538	smg7	100	77.685	ENSIPUG00000016997	smg7	100	77.019	Ictalurus_punctatus
ENSAOCG00000013538	smg7	99	65.432	ENSSTOG00000000401	SMG7	99	65.157	Ictidomys_tridecemlineatus
ENSAOCG00000013538	smg7	99	65.350	ENSJJAG00000012351	Smg7	99	64.992	Jaculus_jaculus
ENSAOCG00000013538	smg7	91	90.196	ENSKMAG00000004900	smg7	99	90.196	Kryptolebias_marmoratus
ENSAOCG00000013538	smg7	99	90.854	ENSLBEG00000002983	smg7	99	90.679	Labrus_bergylta
ENSAOCG00000013538	smg7	52	80.067	ENSLBEG00000005220	-	75	80.067	Labrus_bergylta
ENSAOCG00000013538	smg7	99	68.215	ENSLACG00000000972	SMG7	95	72.841	Latimeria_chalumnae
ENSAOCG00000013538	smg7	99	72.072	ENSLOCG00000002010	smg7	99	71.826	Lepisosteus_oculatus
ENSAOCG00000013538	smg7	99	65.318	ENSLAFG00000008186	SMG7	99	64.793	Loxodonta_africana
ENSAOCG00000013538	smg7	99	65.679	ENSMFAG00000031653	SMG7	85	92.994	Macaca_fascicularis
ENSAOCG00000013538	smg7	99	65.982	ENSMMUG00000018458	SMG7	99	65.461	Macaca_mulatta
ENSAOCG00000013538	smg7	99	66.923	ENSMNEG00000034798	SMG7	85	92.994	Macaca_nemestrina
ENSAOCG00000013538	smg7	99	66.923	ENSMLEG00000037170	SMG7	100	65.482	Mandrillus_leucophaeus
ENSAOCG00000013538	smg7	88	90.781	ENSMAMG00000018733	smg7	86	90.405	Mastacembelus_armatus
ENSAOCG00000013538	smg7	100	92.636	ENSMZEG00005015247	smg7	100	90.711	Maylandia_zebra
ENSAOCG00000013538	smg7	99	66.295	ENSMGAG00000001561	SMG7	99	65.893	Meleagris_gallopavo
ENSAOCG00000013538	smg7	99	65.726	ENSMAUG00000019484	Smg7	99	65.385	Mesocricetus_auratus
ENSAOCG00000013538	smg7	99	66.923	ENSMICG00000007145	SMG7	81	94.194	Microcebus_murinus
ENSAOCG00000013538	smg7	99	65.388	ENSMOCG00000020748	Smg7	99	64.927	Microtus_ochrogaster
ENSAOCG00000013538	smg7	94	92.000	ENSMMOG00000001524	smg7	98	92.000	Mola_mola
ENSAOCG00000013538	smg7	92	67.131	ENSMODG00000007139	SMG7	99	66.205	Monodelphis_domestica
ENSAOCG00000013538	smg7	100	91.402	ENSMALG00000000061	smg7	94	91.152	Monopterus_albus
ENSAOCG00000013538	smg7	99	66.325	MGP_CAROLIEiJ_G0014704	Smg7	99	65.612	Mus_caroli
ENSAOCG00000013538	smg7	99	65.812	ENSMUSG00000042772	Smg7	99	65.556	Mus_musculus
ENSAOCG00000013538	smg7	99	66.039	MGP_PahariEiJ_G0027940	Smg7	99	65.697	Mus_pahari
ENSAOCG00000013538	smg7	99	65.983	MGP_SPRETEiJ_G0015511	Smg7	99	65.470	Mus_spretus
ENSAOCG00000013538	smg7	98	64.393	ENSMPUG00000011732	SMG7	97	63.667	Mustela_putorius_furo
ENSAOCG00000013538	smg7	99	64.905	ENSMLUG00000015417	SMG7	99	64.657	Myotis_lucifugus
ENSAOCG00000013538	smg7	100	66.014	ENSNGAG00000009836	Smg7	100	64.991	Nannospalax_galili
ENSAOCG00000013538	smg7	98	85.437	ENSNBRG00000024343	smg7	99	84.234	Neolamprologus_brichardi
ENSAOCG00000013538	smg7	99	67.009	ENSNLEG00000018018	SMG7	100	65.567	Nomascus_leucogenys
ENSAOCG00000013538	smg7	71	65.341	ENSMEUG00000004681	SMG7	73	65.341	Notamacropus_eugenii
ENSAOCG00000013538	smg7	96	59.829	ENSOPRG00000013942	SMG7	92	69.274	Ochotona_princeps
ENSAOCG00000013538	smg7	99	66.496	ENSODEG00000010390	SMG7	99	65.954	Octodon_degus
ENSAOCG00000013538	smg7	100	92.683	ENSONIG00000000277	smg7	100	90.505	Oreochromis_niloticus
ENSAOCG00000013538	smg7	99	64.315	ENSOANG00000000994	SMG7	100	63.674	Ornithorhynchus_anatinus
ENSAOCG00000013538	smg7	99	63.171	ENSOCUG00000005887	SMG7	93	62.531	Oryctolagus_cuniculus
ENSAOCG00000013538	smg7	100	80.567	ENSORLG00000007314	smg7	100	80.567	Oryzias_latipes
ENSAOCG00000013538	smg7	100	81.068	ENSORLG00020015779	smg7	100	81.068	Oryzias_latipes_hni
ENSAOCG00000013538	smg7	100	81.985	ENSORLG00015012289	smg7	100	80.817	Oryzias_latipes_hsok
ENSAOCG00000013538	smg7	100	82.402	ENSOMEG00000002328	smg7	100	81.568	Oryzias_melastigma
ENSAOCG00000013538	smg7	97	63.922	ENSOGAG00000003107	SMG7	93	63.297	Otolemur_garnettii
ENSAOCG00000013538	smg7	99	65.278	ENSOARG00000001352	SMG7	100	65.074	Ovis_aries
ENSAOCG00000013538	smg7	99	67.009	ENSPPAG00000031619	SMG7	90	89.697	Pan_paniscus
ENSAOCG00000013538	smg7	99	66.610	ENSPPRG00000011222	SMG7	99	65.868	Panthera_pardus
ENSAOCG00000013538	smg7	97	65.625	ENSPTIG00000007242	SMG7	100	64.890	Panthera_tigris_altaica
ENSAOCG00000013538	smg7	99	67.009	ENSPTRG00000001764	SMG7	85	92.994	Pan_troglodytes
ENSAOCG00000013538	smg7	99	66.923	ENSPANG00000004520	SMG7	99	66.382	Papio_anubis
ENSAOCG00000013538	smg7	100	71.725	ENSPKIG00000007242	smg7	100	71.476	Paramormyrops_kingsleyae
ENSAOCG00000013538	smg7	99	65.868	ENSPSIG00000012201	SMG7	100	65.946	Pelodiscus_sinensis
ENSAOCG00000013538	smg7	66	61.692	ENSPMGG00000021833	smg7	97	49.941	Periophthalmus_magnuspinnatus
ENSAOCG00000013538	smg7	99	65.232	ENSPEMG00000011315	Smg7	99	64.828	Peromyscus_maniculatus_bairdii
ENSAOCG00000013538	smg7	99	67.436	ENSPCIG00000003786	SMG7	89	93.750	Phascolarctos_cinereus
ENSAOCG00000013538	smg7	100	85.619	ENSPFOG00000019219	smg7	100	84.775	Poecilia_formosa
ENSAOCG00000013538	smg7	100	85.690	ENSPLAG00000001446	smg7	100	84.809	Poecilia_latipinna
ENSAOCG00000013538	smg7	97	85.305	ENSPMEG00000005218	smg7	99	84.395	Poecilia_mexicana
ENSAOCG00000013538	smg7	88	80.361	ENSPREG00000019039	smg7	92	80.076	Poecilia_reticulata
ENSAOCG00000013538	smg7	99	67.009	ENSPPYG00000000427	SMG7	99	66.467	Pongo_abelii
ENSAOCG00000013538	smg7	84	73.304	ENSPCAG00000008360	SMG7	86	73.304	Procavia_capensis
ENSAOCG00000013538	smg7	99	65.665	ENSPCOG00000011996	SMG7	76	94.194	Propithecus_coquereli
ENSAOCG00000013538	smg7	91	61.006	ENSPVAG00000000851	SMG7	89	60.827	Pteropus_vampyrus
ENSAOCG00000013538	smg7	100	92.552	ENSPNYG00000007643	smg7	100	90.628	Pundamilia_nyererei
ENSAOCG00000013538	smg7	100	77.990	ENSPNAG00000011374	smg7	100	78.607	Pygocentrus_nattereri
ENSAOCG00000013538	smg7	99	66.325	ENSRNOG00000027962	Smg7	99	66.463	Rattus_norvegicus
ENSAOCG00000013538	smg7	99	66.923	ENSRBIG00000036316	SMG7	100	65.482	Rhinopithecus_bieti
ENSAOCG00000013538	smg7	99	66.923	ENSRROG00000035719	SMG7	100	65.482	Rhinopithecus_roxellana
ENSAOCG00000013538	smg7	99	64.971	ENSSBOG00000023454	SMG7	88	93.168	Saimiri_boliviensis_boliviensis
ENSAOCG00000013538	smg7	100	66.780	ENSSHAG00000013147	SMG7	99	66.781	Sarcophilus_harrisii
ENSAOCG00000013538	smg7	100	75.579	ENSSFOG00015017252	smg7	100	74.834	Scleropages_formosus
ENSAOCG00000013538	smg7	100	88.133	ENSSMAG00000006067	smg7	100	87.719	Scophthalmus_maximus
ENSAOCG00000013538	smg7	100	95.073	ENSSDUG00000017543	smg7	100	95.073	Seriola_dumerili
ENSAOCG00000013538	smg7	99	66.468	ENSSPUG00000002064	SMG7	99	66.012	Sphenodon_punctatus
ENSAOCG00000013538	smg7	99	93.211	ENSSPAG00000008733	smg7	99	93.211	Stegastes_partitus
ENSAOCG00000013538	smg7	99	65.550	ENSSSCG00000015558	SMG7	99	65.292	Sus_scrofa
ENSAOCG00000013538	smg7	99	66.752	ENSTGUG00000003928	SMG7	100	66.438	Taeniopygia_guttata
ENSAOCG00000013538	smg7	100	75.964	ENSTNIG00000002802	smg7	100	74.774	Tetraodon_nigroviridis
ENSAOCG00000013538	smg7	78	68.000	ENSTBEG00000003220	SMG7	75	68.000	Tupaia_belangeri
ENSAOCG00000013538	smg7	96	64.450	ENSTTRG00000014778	SMG7	94	64.280	Tursiops_truncatus
ENSAOCG00000013538	smg7	96	64.128	ENSUAMG00000017473	SMG7	100	63.443	Ursus_americanus
ENSAOCG00000013538	smg7	97	64.122	ENSUMAG00000016389	SMG7	100	63.466	Ursus_maritimus
ENSAOCG00000013538	smg7	99	64.885	ENSVVUG00000008976	SMG7	99	67.943	Vulpes_vulpes
ENSAOCG00000013538	smg7	99	60.102	ENSXETG00000012528	smg7	99	59.983	Xenopus_tropicalis
ENSAOCG00000013538	smg7	100	85.169	ENSXMAG00000007123	smg7	100	84.288	Xiphophorus_maculatus