EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAOCG00000013589 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Minus strand
Length: 2570 bases
Position: chrNXFZ01002236.1:92425-94994
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000009400	zf-C2H2	PF00096.26	5.8e-22	1	3
ENSAOCP00000009400	zf-C2H2	PF00096.26	5.8e-22	2	3
ENSAOCP00000009400	zf-C2H2	PF00096.26	5.8e-22	3	3
ENSAOCP00000009400	zf-met	PF12874.7	7e-06	1	3
ENSAOCP00000009400	zf-met	PF12874.7	7e-06	2	3
ENSAOCP00000009400	zf-met	PF12874.7	7e-06	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000016113	-	792	-	ENSAOCP00000009400	263 (aa)	-	-

Gene Model

Click here to download ENSAOCG00000013589's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000013589's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAOCG00000013589	-	97	38.647	ENSAOCG00000014165	-	82	38.528
ENSAOCG00000013589	-	91	36.517	ENSAOCG00000001327	-	90	36.517
ENSAOCG00000013589	-	88	38.462	ENSAOCG00000001325	-	66	38.462
ENSAOCG00000013589	-	90	38.710	ENSAOCG00000018579	-	74	38.710
ENSAOCG00000013589	-	86	43.137	ENSAOCG00000010460	zgc:171929	50	43.137
ENSAOCG00000013589	-	89	48.649	ENSAOCG00000015369	-	97	48.649
ENSAOCG00000013589	-	88	48.649	ENSAOCG00000007347	-	68	48.649
ENSAOCG00000013589	-	89	42.995	ENSAOCG00000022283	-	87	42.995
ENSAOCG00000013589	-	97	37.069	ENSAOCG00000015987	-	67	37.069
ENSAOCG00000013589	-	88	39.394	ENSAOCG00000006793	-	79	39.394
ENSAOCG00000013589	-	88	33.036	ENSAOCG00000015241	PRDM15	52	31.613
ENSAOCG00000013589	-	89	40.496	ENSAOCG00000013978	-	88	40.496
ENSAOCG00000013589	-	97	38.342	ENSAOCG00000018307	-	87	38.696
ENSAOCG00000013589	-	88	39.456	ENSAOCG00000016088	-	77	39.456
ENSAOCG00000013589	-	97	41.718	ENSAOCG00000013672	-	94	37.736
ENSAOCG00000013589	-	91	40.517	ENSAOCG00000022004	znf236	65	39.200
ENSAOCG00000013589	-	89	38.362	ENSAOCG00000013578	-	89	38.362
ENSAOCG00000013589	-	93	37.264	ENSAOCG00000022276	-	94	37.264
ENSAOCG00000013589	-	88	37.931	ENSAOCG00000013951	-	50	37.931
ENSAOCG00000013589	-	96	39.056	ENSAOCG00000022079	-	83	39.056
ENSAOCG00000013589	-	88	40.506	ENSAOCG00000024256	-	92	40.506
ENSAOCG00000013589	-	97	33.607	ENSAOCG00000016897	-	68	37.805
ENSAOCG00000013589	-	88	36.744	ENSAOCG00000007134	-	73	36.744
ENSAOCG00000013589	-	97	44.099	ENSAOCG00000016287	-	70	43.662
ENSAOCG00000013589	-	92	32.819	ENSAOCG00000013656	-	67	33.766
ENSAOCG00000013589	-	94	35.102	ENSAOCG00000016905	-	76	35.294
ENSAOCG00000013589	-	89	40.870	ENSAOCG00000013130	-	78	40.870
ENSAOCG00000013589	-	91	31.579	ENSAOCG00000014818	znf319b	81	32.627
ENSAOCG00000013589	-	93	36.538	ENSAOCG00000007045	-	85	36.538
ENSAOCG00000013589	-	89	37.668	ENSAOCG00000010471	-	65	36.408
ENSAOCG00000013589	-	95	38.934	ENSAOCG00000003494	si:dkey-7i4.5	92	38.934
ENSAOCG00000013589	-	89	40.930	ENSAOCG00000004564	-	82	40.930
ENSAOCG00000013589	-	88	38.650	ENSAOCG00000000570	-	60	37.864
ENSAOCG00000013589	-	94	39.130	ENSAOCG00000020830	-	92	39.130
ENSAOCG00000013589	-	89	37.805	ENSAOCG00000018543	-	84	37.805
ENSAOCG00000013589	-	98	40.693	ENSAOCG00000022675	-	93	40.693
ENSAOCG00000013589	-	91	30.851	ENSAOCG00000019753	-	65	30.851
ENSAOCG00000013589	-	88	39.130	ENSAOCG00000018484	-	96	39.130
ENSAOCG00000013589	-	92	36.538	ENSAOCG00000012903	-	74	36.538
ENSAOCG00000013589	-	88	38.462	ENSAOCG00000024281	-	93	38.462
ENSAOCG00000013589	-	97	33.621	ENSAOCG00000005450	ZNF319	95	33.621
ENSAOCG00000013589	-	99	32.727	ENSAOCG00000012062	znf646	63	32.727
ENSAOCG00000013589	-	89	40.183	ENSAOCG00000001615	-	83	40.183
ENSAOCG00000013589	-	92	41.176	ENSAOCG00000022459	-	90	39.216
ENSAOCG00000013589	-	99	34.437	ENSAOCG00000020624	-	73	34.437
ENSAOCG00000013589	-	92	38.462	ENSAOCG00000009970	-	62	38.462
ENSAOCG00000013589	-	96	34.677	ENSAOCG00000012813	-	72	45.349
ENSAOCG00000013589	-	88	38.362	ENSAOCG00000010498	-	55	38.362
ENSAOCG00000013589	-	89	36.957	ENSAOCG00000000655	-	60	36.957
ENSAOCG00000013589	-	89	39.565	ENSAOCG00000013934	-	58	39.565
ENSAOCG00000013589	-	90	39.726	ENSAOCG00000004559	-	89	42.029
ENSAOCG00000013589	-	88	41.667	ENSAOCG00000022529	-	50	41.667
ENSAOCG00000013589	-	93	35.450	ENSAOCG00000013505	-	54	35.294
ENSAOCG00000013589	-	97	33.333	ENSAOCG00000023304	-	55	33.333
ENSAOCG00000013589	-	89	39.416	ENSAOCG00000015944	-	65	33.708
ENSAOCG00000013589	-	88	42.174	ENSAOCG00000003277	-	83	44.231
ENSAOCG00000013589	-	89	43.411	ENSAOCG00000013124	-	60	43.411
ENSAOCG00000013589	-	91	38.824	ENSAOCG00000007146	-	59	38.824
ENSAOCG00000013589	-	87	35.652	ENSAOCG00000012829	-	53	35.749
ENSAOCG00000013589	-	88	46.000	ENSAOCG00000002430	-	74	46.000
ENSAOCG00000013589	-	98	39.744	ENSAOCG00000012653	-	86	39.744
ENSAOCG00000013589	-	88	45.385	ENSAOCG00000002585	-	63	45.385
ENSAOCG00000013589	-	89	33.333	ENSAOCG00000021557	scrt2	58	33.333
ENSAOCG00000013589	-	88	32.240	ENSAOCG00000010954	-	57	32.240
ENSAOCG00000013589	-	89	39.754	ENSAOCG00000017595	-	65	40.435
ENSAOCG00000013589	-	97	38.017	ENSAOCG00000013710	-	82	38.017
ENSAOCG00000013589	-	92	36.548	ENSAOCG00000022375	-	91	37.097
ENSAOCG00000013589	-	90	50.407	ENSAOCG00000019475	-	67	50.407
ENSAOCG00000013589	-	88	42.857	ENSAOCG00000015586	-	88	42.857
ENSAOCG00000013589	-	87	37.220	ENSAOCG00000000448	-	93	37.220
ENSAOCG00000013589	-	89	40.343	ENSAOCG00000001341	-	90	38.261
ENSAOCG00000013589	-	91	35.106	ENSAOCG00000017968	snai2	64	35.106
ENSAOCG00000013589	-	92	39.583	ENSAOCG00000016737	-	97	39.583
ENSAOCG00000013589	-	88	42.000	ENSAOCG00000002795	-	63	42.000
ENSAOCG00000013589	-	94	33.460	ENSAOCG00000007388	-	61	33.460
ENSAOCG00000013589	-	89	40.000	ENSAOCG00000017602	-	67	40.000
ENSAOCG00000013589	-	89	39.416	ENSAOCG00000014769	-	74	39.416
ENSAOCG00000013589	-	88	31.092	ENSAOCG00000006744	-	71	31.092
ENSAOCG00000013589	-	91	33.766	ENSAOCG00000014806	prdm5	73	33.766
ENSAOCG00000013589	-	89	38.122	ENSAOCG00000014651	-	58	38.122
ENSAOCG00000013589	-	89	41.916	ENSAOCG00000016409	-	61	41.916
ENSAOCG00000013589	-	86	36.975	ENSAOCG00000005965	-	66	36.975

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000013589	-	93	95.339	ENSAPOG00000001563	-	84	77.826	Acanthochromis_polyacanthus
ENSAOCG00000013589	-	98	59.857	ENSACIG00000015411	-	84	59.857	Amphilophus_citrinellus
ENSAOCG00000013589	-	100	94.318	ENSAPEG00000022774	-	98	94.318	Amphiprion_percula
ENSAOCG00000013589	-	93	35.450	ENSAPEG00000022756	-	54	35.294	Amphiprion_percula
ENSAOCG00000013589	-	90	84.524	ENSATEG00000019261	-	77	83.908	Anabas_testudineus
ENSAOCG00000013589	-	92	38.994	ENSATEG00000019284	-	52	35.979	Anabas_testudineus
ENSAOCG00000013589	-	92	74.286	ENSACLG00000008624	-	88	74.286	Astatotilapia_calliptera
ENSAOCG00000013589	-	89	39.614	ENSACLG00000008606	-	87	39.614	Astatotilapia_calliptera
ENSAOCG00000013589	-	95	73.750	ENSCSEG00000008903	-	90	73.585	Cynoglossus_semilaevis
ENSAOCG00000013589	-	89	40.881	ENSCVAG00000016534	-	50	34.555	Cyprinodon_variegatus
ENSAOCG00000013589	-	91	62.393	ENSGMOG00000000494	-	98	62.979	Gadus_morhua
ENSAOCG00000013589	-	91	80.169	ENSGAFG00000002659	-	66	80.169	Gambusia_affinis
ENSAOCG00000013589	-	93	77.686	ENSGACG00000001377	-	92	79.741	Gasterosteus_aculeatus
ENSAOCG00000013589	-	96	70.703	ENSHBUG00000008502	-	93	70.703	Haplochromis_burtoni
ENSAOCG00000013589	-	92	75.203	ENSHCOG00000000511	-	75	66.667	Hippocampus_comes
ENSAOCG00000013589	-	90	74.894	ENSLBEG00000018509	-	89	73.333	Labrus_bergylta
ENSAOCG00000013589	-	93	83.475	ENSMAMG00000018137	-	62	83.475	Mastacembelus_armatus
ENSAOCG00000013589	-	90	74.790	ENSMZEG00005002583	-	83	75.745	Maylandia_zebra
ENSAOCG00000013589	-	89	69.369	ENSMMOG00000009733	-	81	69.369	Mola_mola
ENSAOCG00000013589	-	88	49.756	ENSMALG00000019991	-	96	63.816	Monopterus_albus
ENSAOCG00000013589	-	90	79.661	ENSNBRG00000008223	-	94	65.769	Neolamprologus_brichardi
ENSAOCG00000013589	-	90	85.593	ENSONIG00000017233	-	99	85.593	Oreochromis_niloticus
ENSAOCG00000013589	-	88	37.736	ENSOMEG00000016463	-	62	35.909	Oryzias_melastigma
ENSAOCG00000013589	-	88	50.000	ENSPMGG00000002384	-	88	50.000	Periophthalmus_magnuspinnatus
ENSAOCG00000013589	-	91	80.085	ENSPFOG00000006287	-	70	79.747	Poecilia_formosa
ENSAOCG00000013589	-	91	79.747	ENSPMEG00000005897	-	64	79.747	Poecilia_mexicana
ENSAOCG00000013589	-	92	68.220	ENSPREG00000021246	-	93	68.220	Poecilia_reticulata
ENSAOCG00000013589	-	96	71.094	ENSPNYG00000023088	-	93	71.094	Pundamilia_nyererei
ENSAOCG00000013589	-	98	84.746	ENSSDUG00000004892	-	63	84.746	Seriola_dumerili
ENSAOCG00000013589	-	97	84.536	ENSSLDG00000005670	-	92	84.536	Seriola_lalandi_dorsalis
ENSAOCG00000013589	-	89	91.623	ENSSPAG00000022219	-	60	91.623	Stegastes_partitus
ENSAOCG00000013589	-	92	73.077	ENSTNIG00000011188	-	98	73.077	Tetraodon_nigroviridis
ENSAOCG00000013589	-	91	80.169	ENSXMAG00000000866	-	60	80.169	Xiphophorus_maculatus