EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAOCG00000013672 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Minus strand
Length: 7566 bases
Position: chrNXFZ01002410.1:43537-51102
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000025798	zf-C2H2	PF00096.26	1.1e-60	1	10
ENSAOCP00000025798	zf-C2H2	PF00096.26	1.1e-60	2	10
ENSAOCP00000025798	zf-C2H2	PF00096.26	1.1e-60	3	10
ENSAOCP00000025798	zf-C2H2	PF00096.26	1.1e-60	4	10
ENSAOCP00000025798	zf-C2H2	PF00096.26	1.1e-60	5	10
ENSAOCP00000025798	zf-C2H2	PF00096.26	1.1e-60	6	10
ENSAOCP00000025798	zf-C2H2	PF00096.26	1.1e-60	7	10
ENSAOCP00000025798	zf-C2H2	PF00096.26	1.1e-60	8	10
ENSAOCP00000025798	zf-C2H2	PF00096.26	1.1e-60	9	10
ENSAOCP00000025798	zf-C2H2	PF00096.26	1.1e-60	10	10
ENSAOCP00000025822	zf-C2H2	PF00096.26	1.7e-46	1	7
ENSAOCP00000025822	zf-C2H2	PF00096.26	1.7e-46	2	7
ENSAOCP00000025822	zf-C2H2	PF00096.26	1.7e-46	3	7
ENSAOCP00000025822	zf-C2H2	PF00096.26	1.7e-46	4	7
ENSAOCP00000025822	zf-C2H2	PF00096.26	1.7e-46	5	7
ENSAOCP00000025822	zf-C2H2	PF00096.26	1.7e-46	6	7
ENSAOCP00000025822	zf-C2H2	PF00096.26	1.7e-46	7	7
ENSAOCP00000025826	zf-C2H2	PF00096.26	4.2e-43	1	7
ENSAOCP00000025826	zf-C2H2	PF00096.26	4.2e-43	2	7
ENSAOCP00000025826	zf-C2H2	PF00096.26	4.2e-43	3	7
ENSAOCP00000025826	zf-C2H2	PF00096.26	4.2e-43	4	7
ENSAOCP00000025826	zf-C2H2	PF00096.26	4.2e-43	5	7
ENSAOCP00000025826	zf-C2H2	PF00096.26	4.2e-43	6	7
ENSAOCP00000025826	zf-C2H2	PF00096.26	4.2e-43	7	7
ENSAOCP00000025793	zf-C2H2	PF00096.26	2.1e-36	1	5
ENSAOCP00000025793	zf-C2H2	PF00096.26	2.1e-36	2	5
ENSAOCP00000025793	zf-C2H2	PF00096.26	2.1e-36	3	5
ENSAOCP00000025793	zf-C2H2	PF00096.26	2.1e-36	4	5
ENSAOCP00000025793	zf-C2H2	PF00096.26	2.1e-36	5	5
ENSAOCP00000025798	zf-met	PF12874.7	4.4e-17	1	1
ENSAOCP00000025822	zf-met	PF12874.7	1.1e-11	1	2
ENSAOCP00000025822	zf-met	PF12874.7	1.1e-11	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000016253	-	639	-	ENSAOCP00000025822	212 (aa)	-	-
ENSAOCT00000016214	-	660	-	ENSAOCP00000025793	219 (aa)	-	-
ENSAOCT00000016240	-	1122	-	ENSAOCP00000025798	373 (aa)	-	-
ENSAOCT00000016291	-	978	-	ENSAOCP00000025826	325 (aa)	-	-

Gene Model

Click here to download ENSAOCG00000013672's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000013672's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAOCG00000013672	-	95	41.206	ENSAOCG00000008769	znf384l	56	40.086
ENSAOCG00000013672	-	96	48.227	ENSAOCG00000007134	-	84	42.500
ENSAOCG00000013672	-	94	57.265	ENSAOCG00000017588	-	50	52.222
ENSAOCG00000013672	-	95	49.261	ENSAOCG00000010471	-	77	48.165
ENSAOCG00000013672	-	97	67.839	ENSAOCG00000024281	-	94	68.033
ENSAOCG00000013672	-	95	53.704	ENSAOCG00000024256	-	89	54.545
ENSAOCG00000013672	-	94	49.708	ENSAOCG00000013951	-	68	50.820
ENSAOCG00000013672	-	95	48.241	ENSAOCG00000003494	si:dkey-7i4.5	97	44.493
ENSAOCG00000013672	-	95	47.368	ENSAOCG00000021557	scrt2	60	39.286
ENSAOCG00000013672	-	95	45.312	ENSAOCG00000021187	gfi1b	60	38.342
ENSAOCG00000013672	-	100	57.310	ENSAOCG00000009970	-	88	54.286
ENSAOCG00000013672	-	98	54.040	ENSAOCG00000017602	-	89	49.842
ENSAOCG00000013672	-	95	51.685	ENSAOCG00000010954	-	57	51.685
ENSAOCG00000013672	-	97	53.086	ENSAOCG00000022004	znf236	62	53.086
ENSAOCG00000013672	-	99	57.563	ENSAOCG00000014165	-	99	55.721
ENSAOCG00000013672	-	99	71.591	ENSAOCG00000015369	-	96	72.414
ENSAOCG00000013672	-	92	41.176	ENSAOCG00000010460	zgc:171929	51	41.176
ENSAOCG00000013672	-	93	65.574	ENSAOCG00000016088	-	87	65.574
ENSAOCG00000013672	-	94	53.448	ENSAOCG00000019475	-	73	49.074
ENSAOCG00000013672	-	95	38.298	ENSAOCG00000015241	PRDM15	52	37.059
ENSAOCG00000013672	-	96	52.525	ENSAOCG00000013578	-	91	48.000
ENSAOCG00000013672	-	94	35.922	ENSAOCG00000010173	znf407	58	36.967
ENSAOCG00000013672	-	100	53.247	ENSAOCG00000020652	-	70	48.148
ENSAOCG00000013672	-	94	57.286	ENSAOCG00000024767	-	71	51.095
ENSAOCG00000013672	-	99	49.133	ENSAOCG00000002430	-	90	49.133
ENSAOCG00000013672	-	98	47.482	ENSAOCG00000013124	-	73	45.860
ENSAOCG00000013672	-	95	45.614	ENSAOCG00000014769	-	88	37.162
ENSAOCG00000013672	-	95	45.614	ENSAOCG00000015944	-	80	37.162
ENSAOCG00000013672	-	99	67.257	ENSAOCG00000018484	-	93	71.034
ENSAOCG00000013672	-	98	36.207	ENSAOCG00000019753	-	54	45.205
ENSAOCG00000013672	-	98	52.736	ENSAOCG00000012903	-	85	52.247
ENSAOCG00000013672	-	95	44.444	ENSAOCG00000001327	-	89	44.444
ENSAOCG00000013672	-	99	64.327	ENSAOCG00000022459	-	99	63.429
ENSAOCG00000013672	-	99	53.529	ENSAOCG00000012829	-	69	53.529
ENSAOCG00000013672	-	100	50.000	ENSAOCG00000012823	-	77	50.000
ENSAOCG00000013672	-	95	49.091	ENSAOCG00000022926	-	74	36.649
ENSAOCG00000013672	-	97	50.000	ENSAOCG00000007388	-	69	49.206
ENSAOCG00000013672	-	97	41.538	ENSAOCG00000013656	-	77	39.871
ENSAOCG00000013672	-	96	52.020	ENSAOCG00000017595	-	61	52.841
ENSAOCG00000013672	-	93	37.615	ENSAOCG00000019850	si:ch211-216l23.1	78	36.607
ENSAOCG00000013672	-	98	68.182	ENSAOCG00000018543	-	85	69.942
ENSAOCG00000013672	-	98	60.234	ENSAOCG00000011204	-	69	60.234
ENSAOCG00000013672	-	94	60.526	ENSAOCG00000022375	-	95	52.410
ENSAOCG00000013672	-	97	66.667	ENSAOCG00000003277	-	84	61.494
ENSAOCG00000013672	-	96	48.980	ENSAOCG00000000960	znf341	51	48.980
ENSAOCG00000013672	-	95	42.188	ENSAOCG00000003910	scrt1b	60	39.259
ENSAOCG00000013672	-	96	48.990	ENSAOCG00000002795	-	87	43.254
ENSAOCG00000013672	-	96	47.150	ENSAOCG00000024275	GZF1	53	47.150
ENSAOCG00000013672	-	96	44.000	ENSAOCG00000022283	-	89	44.000
ENSAOCG00000013672	-	98	41.500	ENSAOCG00000004564	-	84	41.500
ENSAOCG00000013672	-	95	45.876	ENSAOCG00000015987	-	66	45.876
ENSAOCG00000013672	-	99	72.011	ENSAOCG00000018307	-	97	72.011
ENSAOCG00000013672	-	96	42.593	ENSAOCG00000004559	-	89	43.429
ENSAOCG00000013672	-	99	68.421	ENSAOCG00000013130	-	90	68.421
ENSAOCG00000013672	-	94	78.319	ENSAOCG00000006793	-	99	72.368
ENSAOCG00000013672	-	94	37.736	ENSAOCG00000013589	-	97	41.718
ENSAOCG00000013672	-	99	65.909	ENSAOCG00000002585	-	85	65.909
ENSAOCG00000013672	-	96	50.000	ENSAOCG00000016409	-	65	49.107
ENSAOCG00000013672	-	99	41.714	ENSAOCG00000001341	-	95	39.806
ENSAOCG00000013672	-	98	50.000	ENSAOCG00000013934	-	79	46.281
ENSAOCG00000013672	-	95	45.946	ENSAOCG00000012062	znf646	69	45.946
ENSAOCG00000013672	-	69	30.263	ENSAOCG00000018684	si:dkey-89b17.4	61	30.263
ENSAOCG00000013672	-	99	58.333	ENSAOCG00000014651	-	75	58.333
ENSAOCG00000013672	-	90	34.746	ENSAOCG00000006744	-	84	36.441
ENSAOCG00000013672	-	99	62.791	ENSAOCG00000016287	-	85	61.453
ENSAOCG00000013672	-	96	42.791	ENSAOCG00000016897	-	82	40.179
ENSAOCG00000013672	-	99	42.500	ENSAOCG00000012653	-	91	38.339
ENSAOCG00000013672	-	93	47.826	ENSAOCG00000005965	-	70	47.826
ENSAOCG00000013672	-	100	49.123	ENSAOCG00000007045	-	93	49.123
ENSAOCG00000013672	-	100	52.261	ENSAOCG00000013978	-	89	52.261
ENSAOCG00000013672	-	97	42.347	ENSAOCG00000005450	ZNF319	88	42.347
ENSAOCG00000013672	-	99	49.462	ENSAOCG00000022079	-	92	51.429
ENSAOCG00000013672	-	95	53.299	ENSAOCG00000010498	-	62	52.273
ENSAOCG00000013672	-	95	54.438	ENSAOCG00000022529	-	77	52.469
ENSAOCG00000013672	-	99	68.421	ENSAOCG00000020830	-	99	64.881
ENSAOCG00000013672	-	99	41.964	ENSAOCG00000017968	snai2	82	41.964
ENSAOCG00000013672	-	93	39.130	ENSAOCG00000018579	-	72	40.741
ENSAOCG00000013672	-	95	53.846	ENSAOCG00000007347	-	72	51.020
ENSAOCG00000013672	-	95	55.435	ENSAOCG00000000463	-	51	45.455
ENSAOCG00000013672	-	100	57.576	ENSAOCG00000020624	-	83	47.953
ENSAOCG00000013672	-	99	61.589	ENSAOCG00000000570	-	94	69.767
ENSAOCG00000013672	-	94	57.286	ENSAOCG00000013345	-	71	51.095
ENSAOCG00000013672	-	94	44.030	ENSAOCG00000001325	-	83	43.066
ENSAOCG00000013672	-	94	66.949	ENSAOCG00000000448	-	93	66.949
ENSAOCG00000013672	-	92	68.966	ENSAOCG00000022276	-	94	68.966
ENSAOCG00000013672	-	94	41.566	ENSAOCG00000014818	znf319b	88	35.802
ENSAOCG00000013672	-	97	42.365	ENSAOCG00000001615	-	84	44.000
ENSAOCG00000013672	-	99	70.588	ENSAOCG00000015586	-	97	70.760
ENSAOCG00000013672	-	99	50.000	ENSAOCG00000000655	-	75	50.000
ENSAOCG00000013672	-	94	58.883	ENSAOCG00000016737	-	96	58.883
ENSAOCG00000013672	-	96	46.857	ENSAOCG00000014806	prdm5	75	46.857
ENSAOCG00000013672	-	99	65.143	ENSAOCG00000022675	-	94	65.143
ENSAOCG00000013672	-	99	79.000	ENSAOCG00000013710	-	94	77.528
ENSAOCG00000013672	-	100	46.043	ENSAOCG00000012813	-	92	46.043
ENSAOCG00000013672	-	97	41.327	ENSAOCG00000008304	zbtb48	56	41.327
ENSAOCG00000013672	-	99	60.938	ENSAOCG00000016905	-	83	60.938

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000013672	-	94	56.061	ENSACLG00000008821	-	96	51.705	Astatotilapia_calliptera
ENSAOCG00000013672	-	94	51.163	ENSAMXG00000036241	-	93	47.205	Astyanax_mexicanus
ENSAOCG00000013672	-	94	55.276	ENSAMXG00000036633	-	68	52.764	Astyanax_mexicanus
ENSAOCG00000013672	-	93	55.051	ENSAMXG00000037981	-	76	54.128	Astyanax_mexicanus
ENSAOCG00000013672	-	94	54.545	ENSAMXG00000040677	-	86	54.598	Astyanax_mexicanus
ENSAOCG00000013672	-	94	57.216	ENSAMXG00000043423	-	75	57.216	Astyanax_mexicanus
ENSAOCG00000013672	-	95	56.250	ENSTSYG00000006246	-	73	58.182	Carlito_syrichta
ENSAOCG00000013672	-	94	52.261	ENSCGRG00001012803	-	76	52.778	Cricetulus_griseus_chok1gshd
ENSAOCG00000013672	-	98	46.104	ENSCGRG00001019143	-	80	50.833	Cricetulus_griseus_chok1gshd
ENSAOCG00000013672	-	98	53.623	ENSCGRG00001024303	-	97	55.814	Cricetulus_griseus_chok1gshd
ENSAOCG00000013672	-	98	58.081	ENSCGRG00000008531	-	92	58.081	Cricetulus_griseus_crigri
ENSAOCG00000013672	-	94	52.261	ENSCGRG00000009742	-	76	52.778	Cricetulus_griseus_crigri
ENSAOCG00000013672	-	96	48.744	ENSEBUG00000007375	-	87	48.780	Eptatretus_burgeri
ENSAOCG00000013672	-	94	44.724	ENSEBUG00000015834	-	85	46.809	Eptatretus_burgeri
ENSAOCG00000013672	-	94	53.179	ENSEBUG00000001121	-	79	53.179	Eptatretus_burgeri
ENSAOCG00000013672	-	96	52.970	ENSEBUG00000017017	-	62	52.970	Eptatretus_burgeri
ENSAOCG00000013672	-	95	54.822	ENSEBUG00000003590	-	79	53.333	Eptatretus_burgeri
ENSAOCG00000013672	-	94	46.023	ENSEBUG00000015993	-	71	42.254	Eptatretus_burgeri
ENSAOCG00000013672	-	95	40.556	ENSEBUG00000003236	-	93	43.056	Eptatretus_burgeri
ENSAOCG00000013672	-	98	55.172	ENSIPUG00000013315	-	95	55.172	Ictalurus_punctatus
ENSAOCG00000013672	-	94	50.754	ENSMAUG00000005691	-	78	50.000	Mesocricetus_auratus
ENSAOCG00000013672	-	95	48.744	ENSMAUG00000016437	-	99	48.851	Mesocricetus_auratus
ENSAOCG00000013672	-	94	52.041	ENSMOCG00000000365	-	86	49.309	Microtus_ochrogaster
ENSAOCG00000013672	-	97	54.688	MGP_CAROLIEiJ_G0018683	Zfp493	87	54.857	Mus_caroli
ENSAOCG00000013672	-	94	52.551	MGP_CAROLIEiJ_G0018660	-	61	53.191	Mus_caroli
ENSAOCG00000013672	-	94	57.576	ENSMUSG00000091474	2610021A01Rik	67	57.576	Mus_musculus
ENSAOCG00000013672	-	94	53.769	ENSMUSG00000074824	Rslcan18	66	52.968	Mus_musculus
ENSAOCG00000013672	-	97	57.576	MGP_PahariEiJ_G0012839	-	61	56.725	Mus_pahari
ENSAOCG00000013672	-	94	53.061	MGP_SPRETEiJ_G0019543	-	62	53.061	Mus_spretus
ENSAOCG00000013672	-	96	44.218	ENSPMAG00000000404	-	99	47.059	Petromyzon_marinus
ENSAOCG00000013672	-	94	57.789	ENSPNAG00000014492	-	89	57.789	Pygocentrus_nattereri
ENSAOCG00000013672	-	94	56.647	ENSPNAG00000003017	-	86	56.647	Pygocentrus_nattereri
ENSAOCG00000013672	-	96	57.471	ENSSSCG00000040389	-	90	55.429	Sus_scrofa
ENSAOCG00000013672	-	95	44.025	ENSTRUG00000014476	-	90	44.025	Takifugu_rubripes