EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAOCG00000013808 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: ras-related protein Rab-1A-like
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Minus strand
Length: 5164 bases
Position: chrNXFZ01001102.1:840-6003
Accession: 111579642
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000009610	MMR_HSR1	PF01926.23	3.9e-05	1	1
ENSAOCP00000009615	MMR_HSR1	PF01926.23	8.9e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000016440	-	660	XM_023286995	ENSAOCP00000009615	219 (aa)	XP_023142763	-
ENSAOCT00000029486	-	393	-	ENSAOCP00000009610	130 (aa)	-	-

Gene Model

Click here to download ENSAOCG00000013808's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000013808's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAOCG00000013808	-	89	37.815	ENSAOCG00000010160	si:cabz01085950.1	58	37.815
ENSAOCG00000013808	-	90	42.735	ENSAOCG00000001554	rab22a	66	40.310
ENSAOCG00000013808	-	92	71.429	ENSAOCG00000016825	si:dkey-16l2.16	63	66.917
ENSAOCG00000013808	-	96	55.200	ENSAOCG00000002130	rab12	62	47.468
ENSAOCG00000013808	-	92	57.500	ENSAOCG00000018050	rab11ba	86	43.137
ENSAOCG00000013808	-	93	88.430	ENSAOCG00000003965	rab1ba	99	65.842
ENSAOCG00000013808	-	92	45.528	ENSAOCG00000018241	rab36	64	36.257
ENSAOCG00000013808	-	96	47.200	ENSAOCG00000008492	rab14	59	48.031
ENSAOCG00000013808	-	92	47.107	ENSAOCG00000012921	rab42a	70	37.968
ENSAOCG00000013808	-	94	36.066	ENSAOCG00000008069	rabl2	54	36.066
ENSAOCG00000013808	-	91	40.984	ENSAOCG00000005772	RAB7A	69	36.364
ENSAOCG00000013808	-	90	30.508	ENSAOCG00000024419	arl8bb	61	30.508
ENSAOCG00000013808	-	81	37.736	ENSAOCG00000010636	RAP2B	88	37.097
ENSAOCG00000013808	-	53	30.000	ENSAOCG00000018628	-	64	30.000
ENSAOCG00000013808	-	90	39.831	ENSAOCG00000009167	-	58	39.098
ENSAOCG00000013808	-	91	42.373	ENSAOCG00000012277	-	65	39.706
ENSAOCG00000013808	-	92	56.667	ENSAOCG00000018849	-	64	52.857
ENSAOCG00000013808	-	82	40.566	ENSAOCG00000004234	rab23	68	35.000
ENSAOCG00000013808	-	92	48.760	ENSAOCG00000007928	RAB39B	67	44.366
ENSAOCG00000013808	-	91	43.220	ENSAOCG00000002298	rab6ba	59	42.276
ENSAOCG00000013808	-	92	38.017	ENSAOCG00000017207	si:ch73-116o1.2	65	35.766
ENSAOCG00000013808	-	90	42.149	ENSAOCG00000020491	si:dkey-13a21.4	59	42.975
ENSAOCG00000013808	-	90	31.496	ENSAOCG00000007065	rasl11a	52	30.882
ENSAOCG00000013808	-	92	49.167	ENSAOCG00000015713	rab25b	81	38.710
ENSAOCG00000013808	-	90	43.590	ENSAOCG00000011103	rab6bb	65	39.706
ENSAOCG00000013808	-	92	63.333	ENSAOCG00000015908	-	70	58.571
ENSAOCG00000013808	-	93	89.256	ENSAOCG00000006385	rab1ab	74	80.000
ENSAOCG00000013808	-	95	38.281	ENSAOCG00000011596	RAB9A	64	38.281
ENSAOCG00000013808	-	96	37.984	ENSAOCG00000020020	-	59	37.984
ENSAOCG00000013808	-	91	40.984	ENSAOCG00000008820	-	69	36.364
ENSAOCG00000013808	-	92	54.622	ENSAOCG00000002532	RAB15	62	51.908
ENSAOCG00000013808	-	88	30.833	ENSAOCG00000011925	rasd4	55	30.833
ENSAOCG00000013808	-	89	58.974	ENSAOCG00000016233	rab18a	57	58.974
ENSAOCG00000013808	-	90	30.508	ENSAOCG00000002781	arl8ba	61	30.508
ENSAOCG00000013808	-	92	39.024	ENSAOCG00000013441	rab9a	65	38.806
ENSAOCG00000013808	-	92	39.516	ENSAOCG00000022810	rab9b	66	39.552
ENSAOCG00000013808	-	91	46.610	ENSAOCG00000016614	rab5c	60	46.970
ENSAOCG00000013808	-	92	73.109	ENSAOCG00000005934	rab35b	70	66.901
ENSAOCG00000013808	-	89	57.265	ENSAOCG00000013479	rab18b	57	57.265
ENSAOCG00000013808	-	92	56.667	ENSAOCG00000015678	rab11al	63	54.015
ENSAOCG00000013808	-	94	48.361	ENSAOCG00000003528	rab25a	60	48.031
ENSAOCG00000013808	-	92	55.462	ENSAOCG00000014658	rab2a	65	50.725
ENSAOCG00000013808	-	95	31.061	ENSAOCG00000005269	rasl11b	59	30.872
ENSAOCG00000013808	-	90	33.051	ENSAOCG00000017428	kras	83	32.099
ENSAOCG00000013808	-	96	47.200	ENSAOCG00000018191	-	59	48.031
ENSAOCG00000013808	-	90	32.203	ENSAOCG00000009256	arl8a	61	32.203
ENSAOCG00000013808	-	90	31.405	ENSAOCG00000004724	arl2	69	31.852
ENSAOCG00000013808	-	90	36.975	ENSAOCG00000012766	rras	73	34.228
ENSAOCG00000013808	-	81	32.075	ENSAOCG00000002921	rras2	66	31.852
ENSAOCG00000013808	-	89	35.593	ENSAOCG00000010265	rheb	73	32.117
ENSAOCG00000013808	-	91	48.305	ENSAOCG00000000090	rab5aa	60	48.837
ENSAOCG00000013808	-	92	58.333	ENSAOCG00000020106	rab11a	64	55.474
ENSAOCG00000013808	-	94	53.279	ENSAOCG00000015948	-	61	51.181
ENSAOCG00000013808	-	93	89.256	ENSAOCG00000020606	-	75	80.000
ENSAOCG00000013808	-	55	31.579	ENSAOCG00000003286	arfrp1	65	31.579
ENSAOCG00000013808	-	89	36.752	ENSAOCG00000007510	rhebl1	63	36.752
ENSAOCG00000013808	-	90	33.051	ENSAOCG00000011843	hrasb	62	33.051
ENSAOCG00000013808	-	91	49.167	ENSAOCG00000005790	rab33ba	64	41.401
ENSAOCG00000013808	-	93	58.678	ENSAOCG00000005797	rab15	62	57.252
ENSAOCG00000013808	-	91	43.220	ENSAOCG00000022426	RAB41	91	32.984
ENSAOCG00000013808	-	93	100.000	ENSAOCG00000024149	-	71	91.613
ENSAOCG00000013808	-	92	56.667	ENSAOCG00000018239	rab11bb	86	43.137
ENSAOCG00000013808	-	91	50.833	ENSAOCG00000024675	zgc:101559	63	45.946

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000013808	-	93	98.347	ENSAPOG00000004980	-	71	89.677	Acanthochromis_polyacanthus
ENSAOCG00000013808	-	93	98.347	ENSACIG00000009006	zgc:171927	71	89.677	Amphilophus_citrinellus
ENSAOCG00000013808	-	93	98.347	ENSAPEG00000022171	zgc:171927	66	97.778	Amphiprion_percula
ENSAOCG00000013808	-	93	97.521	ENSATEG00000003430	zgc:171927	71	89.032	Anabas_testudineus
ENSAOCG00000013808	-	93	98.347	ENSACLG00000013734	-	69	93.151	Astatotilapia_calliptera
ENSAOCG00000013808	-	93	93.388	ENSAMXG00000039486	zgc:171927	72	83.871	Astyanax_mexicanus
ENSAOCG00000013808	-	93	95.868	ENSCSEG00000014416	zgc:171927	71	87.097	Cynoglossus_semilaevis
ENSAOCG00000013808	-	93	97.521	ENSCVAG00000009222	zgc:171927	71	88.387	Cyprinodon_variegatus
ENSAOCG00000013808	-	92	95.000	ENSDARG00000033056	zgc:171927	72	84.516	Danio_rerio
ENSAOCG00000013808	-	93	92.562	ENSELUG00000011680	zgc:171927	72	83.226	Esox_lucius
ENSAOCG00000013808	-	93	96.694	ENSFHEG00000022176	zgc:171927	71	88.387	Fundulus_heteroclitus
ENSAOCG00000013808	-	98	88.976	ENSGMOG00000004979	-	66	82.979	Gadus_morhua
ENSAOCG00000013808	-	98	95.276	ENSGAFG00000015702	zgc:171927	57	92.199	Gambusia_affinis
ENSAOCG00000013808	-	98	94.531	ENSGACG00000013401	zgc:171927	76	87.742	Gasterosteus_aculeatus
ENSAOCG00000013808	-	93	98.347	ENSHBUG00000002397	-	69	93.151	Haplochromis_burtoni
ENSAOCG00000013808	-	93	97.521	ENSKMAG00000009856	zgc:171927	71	89.032	Kryptolebias_marmoratus
ENSAOCG00000013808	-	93	97.521	ENSLBEG00000005791	-	65	95.588	Labrus_bergylta
ENSAOCG00000013808	-	95	96.748	ENSLBEG00000027226	-	57	94.656	Labrus_bergylta
ENSAOCG00000013808	-	95	88.710	ENSLOCG00000014692	zgc:171927	71	76.582	Lepisosteus_oculatus
ENSAOCG00000013808	-	93	95.041	ENSMAMG00000020135	zgc:171927	71	87.097	Mastacembelus_armatus
ENSAOCG00000013808	-	93	98.347	ENSMZEG00005024685	-	69	93.151	Maylandia_zebra
ENSAOCG00000013808	-	93	95.041	ENSMMOG00000009833	-	66	92.199	Mola_mola
ENSAOCG00000013808	-	93	95.868	ENSMALG00000021129	zgc:171927	72	87.097	Monopterus_albus
ENSAOCG00000013808	-	93	98.347	ENSNBRG00000006202	zgc:171927	71	88.387	Neolamprologus_brichardi
ENSAOCG00000013808	-	93	96.694	ENSORLG00000000602	zgc:171927	71	88.387	Oryzias_latipes
ENSAOCG00000013808	-	93	96.694	ENSORLG00020021071	zgc:171927	71	88.387	Oryzias_latipes_hni
ENSAOCG00000013808	-	93	96.694	ENSORLG00015010098	zgc:171927	71	88.387	Oryzias_latipes_hsok
ENSAOCG00000013808	-	93	97.521	ENSOMEG00000020594	zgc:171927	71	88.387	Oryzias_melastigma
ENSAOCG00000013808	-	93	98.347	ENSPFOG00000013810	zgc:171927	70	89.677	Poecilia_formosa
ENSAOCG00000013808	-	93	97.521	ENSPLAG00000005869	zgc:171927	71	89.032	Poecilia_latipinna
ENSAOCG00000013808	-	93	98.347	ENSPMEG00000022350	zgc:171927	73	89.677	Poecilia_mexicana
ENSAOCG00000013808	-	93	98.347	ENSPREG00000017517	zgc:171927	71	89.677	Poecilia_reticulata
ENSAOCG00000013808	-	93	97.521	ENSPNYG00000007520	-	71	89.032	Pundamilia_nyererei
ENSAOCG00000013808	-	93	94.215	ENSPNAG00000029574	zgc:171927	72	85.161	Pygocentrus_nattereri
ENSAOCG00000013808	-	93	92.562	ENSSFOG00015005464	zgc:171927	71	82.581	Scleropages_formosus
ENSAOCG00000013808	-	93	95.041	ENSSMAG00000004416	-	71	87.097	Scophthalmus_maximus
ENSAOCG00000013808	-	93	98.347	ENSSDUG00000004445	zgc:171927	71	89.677	Seriola_dumerili
ENSAOCG00000013808	-	93	98.347	ENSSLDG00000018024	zgc:171927	71	89.677	Seriola_lalandi_dorsalis
ENSAOCG00000013808	-	93	98.347	ENSSPAG00000013533	zgc:171927	71	89.677	Stegastes_partitus
ENSAOCG00000013808	-	93	98.347	ENSXCOG00000010695	zgc:171927	74	89.677	Xiphophorus_couchianus
ENSAOCG00000013808	-	93	98.347	ENSXMAG00000004683	zgc:171927	71	89.677	Xiphophorus_maculatus