EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAOCG00000014052 (Gene tree)
Gene ID: 111574565
Gene Symbol: rnpc3
Alias: caliban|clbn|zgc:136847
Full Name: RNA binding region (RNP1%2C RRM) containing 3
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Minus strand
Length: 25724 bases
Position: chrNXFZ01002991.1:157982-183705
Accession: 111574565
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000026047	RRM_1	PF00076.22	1.2e-14	1	2
ENSAOCP00000026047	RRM_1	PF00076.22	1.2e-14	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000016733	-	1947	XM_023279241	ENSAOCP00000026047	519 (aa)	XP_023135009	UPI000C312D76

Gene Model

Click here to download ENSAOCG00000014052's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000014052's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000014052	rnpc3	95	56.200	ENSG00000185946	RNPC3	96	57.895	Homo_sapiens
ENSAOCG00000014052	rnpc3	98	96.863	ENSAPOG00000017371	rnpc3	100	96.863	Acanthochromis_polyacanthus
ENSAOCG00000014052	rnpc3	95	56.000	ENSAMEG00000001694	RNPC3	95	56.200	Ailuropoda_melanoleuca
ENSAOCG00000014052	rnpc3	98	80.000	ENSACIG00000021043	rnpc3	99	80.196	Amphilophus_citrinellus
ENSAOCG00000014052	rnpc3	100	99.615	ENSAPEG00000008739	rnpc3	100	99.615	Amphiprion_percula
ENSAOCG00000014052	rnpc3	98	82.752	ENSATEG00000021263	rnpc3	100	82.752	Anabas_testudineus
ENSAOCG00000014052	rnpc3	87	54.565	ENSAPLG00000015605	RNPC3	99	56.304	Anas_platyrhynchos
ENSAOCG00000014052	rnpc3	94	55.081	ENSACAG00000002029	RNPC3	96	53.386	Anolis_carolinensis
ENSAOCG00000014052	rnpc3	95	55.888	ENSANAG00000019950	RNPC3	95	55.888	Aotus_nancymaae
ENSAOCG00000014052	rnpc3	98	84.843	ENSACLG00000014702	rnpc3	99	84.843	Astatotilapia_calliptera
ENSAOCG00000014052	rnpc3	98	66.667	ENSAMXG00000033372	rnpc3	99	66.667	Astyanax_mexicanus
ENSAOCG00000014052	rnpc3	95	56.200	ENSBTAG00000019091	RNPC3	95	56.200	Bos_taurus
ENSAOCG00000014052	rnpc3	95	55.711	ENSCJAG00000035686	RNPC3	95	55.711	Callithrix_jacchus
ENSAOCG00000014052	rnpc3	95	56.112	ENSCAFG00000019972	RNPC3	95	56.313	Canis_familiaris
ENSAOCG00000014052	rnpc3	95	56.112	ENSCAFG00020011300	RNPC3	95	56.313	Canis_lupus_dingo
ENSAOCG00000014052	rnpc3	95	56.574	ENSCHIG00000020361	RNPC3	95	56.088	Capra_hircus
ENSAOCG00000014052	rnpc3	95	55.689	ENSTSYG00000030256	RNPC3	95	55.689	Carlito_syrichta
ENSAOCG00000014052	rnpc3	84	46.517	ENSCAPG00000013600	RNPC3	97	46.697	Cavia_aperea
ENSAOCG00000014052	rnpc3	95	54.890	ENSCPOG00000031638	RNPC3	95	54.890	Cavia_porcellus
ENSAOCG00000014052	rnpc3	95	55.689	ENSCCAG00000024301	RNPC3	95	55.689	Cebus_capucinus
ENSAOCG00000014052	rnpc3	95	56.287	ENSCATG00000002086	RNPC3	95	56.287	Cercocebus_atys
ENSAOCG00000014052	rnpc3	95	54.890	ENSCLAG00000005169	RNPC3	95	54.691	Chinchilla_lanigera
ENSAOCG00000014052	rnpc3	95	56.088	ENSCSAG00000001519	RNPC3	95	56.088	Chlorocebus_sabaeus
ENSAOCG00000014052	rnpc3	97	55.385	ENSCPBG00000028311	RNPC3	95	57.884	Chrysemys_picta_bellii
ENSAOCG00000014052	rnpc3	93	35.845	ENSCSAVG00000002800	-	84	47.305	Ciona_savignyi
ENSAOCG00000014052	rnpc3	95	56.064	ENSCANG00000031444	RNPC3	95	56.064	Colobus_angolensis_palliatus
ENSAOCG00000014052	rnpc3	95	56.250	ENSCGRG00001019276	Rnpc3	95	56.452	Cricetulus_griseus_chok1gshd
ENSAOCG00000014052	rnpc3	87	54.148	ENSCGRG00000000053	Rnpc3	99	54.148	Cricetulus_griseus_crigri
ENSAOCG00000014052	rnpc3	98	75.246	ENSCSEG00000013475	rnpc3	99	75.246	Cynoglossus_semilaevis
ENSAOCG00000014052	rnpc3	98	83.074	ENSCVAG00000002645	rnpc3	100	83.074	Cyprinodon_variegatus
ENSAOCG00000014052	rnpc3	97	67.984	ENSDARG00000011247	rnpc3	94	72.727	Danio_rerio
ENSAOCG00000014052	rnpc3	95	55.800	ENSDNOG00000044555	-	95	55.800	Dasypus_novemcinctus
ENSAOCG00000014052	rnpc3	95	56.200	ENSDNOG00000047498	-	95	56.200	Dasypus_novemcinctus
ENSAOCG00000014052	rnpc3	95	55.311	ENSDORG00000027343	Rnpc3	95	55.311	Dipodomys_ordii
ENSAOCG00000014052	rnpc3	54	40.741	FBgn0265184	CG44249	67	40.741	Drosophila_melanogaster
ENSAOCG00000014052	rnpc3	98	49.071	ENSEBUG00000002068	rnpc3	99	48.872	Eptatretus_burgeri
ENSAOCG00000014052	rnpc3	95	56.687	ENSEASG00005015957	RNPC3	95	56.687	Equus_asinus_asinus
ENSAOCG00000014052	rnpc3	95	56.886	ENSECAG00000021148	RNPC3	95	56.886	Equus_caballus
ENSAOCG00000014052	rnpc3	97	71.264	ENSELUG00000002264	rnpc3	99	69.349	Esox_lucius
ENSAOCG00000014052	rnpc3	96	56.000	ENSFCAG00000024312	RNPC3	95	56.000	Felis_catus
ENSAOCG00000014052	rnpc3	87	55.022	ENSFALG00000002580	RNPC3	99	56.744	Ficedula_albicollis
ENSAOCG00000014052	rnpc3	95	55.689	ENSFDAG00000019948	RNPC3	95	55.689	Fukomys_damarensis
ENSAOCG00000014052	rnpc3	98	75.098	ENSFHEG00000020647	rnpc3	100	75.098	Fundulus_heteroclitus
ENSAOCG00000014052	rnpc3	99	68.919	ENSGMOG00000019213	rnpc3	99	68.665	Gadus_morhua
ENSAOCG00000014052	rnpc3	95	57.028	ENSGALG00000005162	RNPC3	88	55.847	Gallus_gallus
ENSAOCG00000014052	rnpc3	98	78.824	ENSGAFG00000017236	rnpc3	100	79.648	Gambusia_affinis
ENSAOCG00000014052	rnpc3	98	81.008	ENSGACG00000002048	rnpc3	100	81.977	Gasterosteus_aculeatus
ENSAOCG00000014052	rnpc3	95	56.914	ENSGAGG00000008438	RNPC3	94	58.116	Gopherus_agassizii
ENSAOCG00000014052	rnpc3	96	48.594	ENSGGOG00000026201	-	95	48.394	Gorilla_gorilla
ENSAOCG00000014052	rnpc3	81	79.412	ENSHBUG00000015966	rnpc3	85	81.551	Haplochromis_burtoni
ENSAOCG00000014052	rnpc3	95	55.289	ENSHGLG00000001708	RNPC3	95	55.289	Heterocephalus_glaber_female
ENSAOCG00000014052	rnpc3	95	55.289	ENSHGLG00100003005	RNPC3	95	55.289	Heterocephalus_glaber_male
ENSAOCG00000014052	rnpc3	98	76.817	ENSHCOG00000017135	rnpc3	100	76.817	Hippocampus_comes
ENSAOCG00000014052	rnpc3	98	64.902	ENSIPUG00000002916	rnpc3	99	65.294	Ictalurus_punctatus
ENSAOCG00000014052	rnpc3	95	56.088	ENSSTOG00000025020	RNPC3	95	56.088	Ictidomys_tridecemlineatus
ENSAOCG00000014052	rnpc3	95	55.870	ENSJJAG00000010203	Rnpc3	96	55.622	Jaculus_jaculus
ENSAOCG00000014052	rnpc3	98	80.671	ENSKMAG00000017358	rnpc3	99	80.473	Kryptolebias_marmoratus
ENSAOCG00000014052	rnpc3	99	83.689	ENSLBEG00000024901	rnpc3	99	83.689	Labrus_bergylta
ENSAOCG00000014052	rnpc3	97	59.020	ENSLACG00000005720	RNPC3	92	56.863	Latimeria_chalumnae
ENSAOCG00000014052	rnpc3	98	64.902	ENSLOCG00000007986	rnpc3	99	62.109	Lepisosteus_oculatus
ENSAOCG00000014052	rnpc3	95	56.313	ENSLAFG00000032342	RNPC3	95	56.313	Loxodonta_africana
ENSAOCG00000014052	rnpc3	95	43.775	ENSMFAG00000002917	-	95	42.914	Macaca_fascicularis
ENSAOCG00000014052	rnpc3	95	56.287	ENSMFAG00000002004	RNPC3	95	56.287	Macaca_fascicularis
ENSAOCG00000014052	rnpc3	95	56.088	ENSMMUG00000018039	RNPC3	95	56.088	Macaca_mulatta
ENSAOCG00000014052	rnpc3	78	52.511	ENSMMUG00000002098	-	85	52.511	Macaca_mulatta
ENSAOCG00000014052	rnpc3	95	53.094	ENSMNEG00000033950	RNPC3	95	53.094	Macaca_nemestrina
ENSAOCG00000014052	rnpc3	95	40.644	ENSMNEG00000029209	-	95	42.254	Macaca_nemestrina
ENSAOCG00000014052	rnpc3	95	45.079	ENSMLEG00000034644	-	95	44.553	Mandrillus_leucophaeus
ENSAOCG00000014052	rnpc3	95	56.287	ENSMLEG00000033628	RNPC3	95	56.287	Mandrillus_leucophaeus
ENSAOCG00000014052	rnpc3	98	74.364	ENSMAMG00000007496	rnpc3	100	74.364	Mastacembelus_armatus
ENSAOCG00000014052	rnpc3	98	85.185	ENSMZEG00005020233	rnpc3	99	85.185	Maylandia_zebra
ENSAOCG00000014052	rnpc3	87	55.022	ENSMGAG00000006381	RNPC3	99	55.459	Meleagris_gallopavo
ENSAOCG00000014052	rnpc3	95	56.740	ENSMAUG00000001358	Rnpc3	95	56.740	Mesocricetus_auratus
ENSAOCG00000014052	rnpc3	95	55.489	ENSMICG00000029591	RNPC3	95	55.489	Microcebus_murinus
ENSAOCG00000014052	rnpc3	95	56.627	ENSMOCG00000013423	Rnpc3	95	56.627	Microtus_ochrogaster
ENSAOCG00000014052	rnpc3	98	75.538	ENSMMOG00000005309	rnpc3	100	76.712	Mola_mola
ENSAOCG00000014052	rnpc3	95	56.338	ENSMODG00000002946	RNPC3	95	56.338	Monodelphis_domestica
ENSAOCG00000014052	rnpc3	98	78.824	ENSMALG00000015471	rnpc3	100	78.824	Monopterus_albus
ENSAOCG00000014052	rnpc3	95	56.225	MGP_CAROLIEiJ_G0025555	Rnpc3	96	56.225	Mus_caroli
ENSAOCG00000014052	rnpc3	95	56.400	ENSMUSG00000027981	Rnpc3	99	54.873	Mus_musculus
ENSAOCG00000014052	rnpc3	96	55.578	MGP_PahariEiJ_G0027001	Rnpc3	97	55.578	Mus_pahari
ENSAOCG00000014052	rnpc3	95	56.200	MGP_SPRETEiJ_G0026505	Rnpc3	96	56.200	Mus_spretus
ENSAOCG00000014052	rnpc3	95	56.024	ENSMPUG00000007349	RNPC3	95	56.024	Mustela_putorius_furo
ENSAOCG00000014052	rnpc3	95	55.976	ENSMLUG00000028743	RNPC3	95	55.976	Myotis_lucifugus
ENSAOCG00000014052	rnpc3	95	55.912	ENSNGAG00000010939	Rnpc3	95	55.689	Nannospalax_galili
ENSAOCG00000014052	rnpc3	98	85.039	ENSNBRG00000012196	rnpc3	96	85.039	Neolamprologus_brichardi
ENSAOCG00000014052	rnpc3	95	56.200	ENSNLEG00000012013	RNPC3	95	56.200	Nomascus_leucogenys
ENSAOCG00000014052	rnpc3	95	56.487	ENSODEG00000007612	RNPC3	95	54.800	Octodon_degus
ENSAOCG00000014052	rnpc3	98	85.010	ENSONIG00000004770	rnpc3	100	85.020	Oreochromis_niloticus
ENSAOCG00000014052	rnpc3	90	58.511	ENSOANG00000008220	RNPC3	99	58.511	Ornithorhynchus_anatinus
ENSAOCG00000014052	rnpc3	95	55.976	ENSOCUG00000004016	RNPC3	95	55.689	Oryctolagus_cuniculus
ENSAOCG00000014052	rnpc3	98	77.255	ENSORLG00000005694	rnpc3	100	77.255	Oryzias_latipes
ENSAOCG00000014052	rnpc3	98	77.255	ENSORLG00020005513	rnpc3	100	77.255	Oryzias_latipes_hni
ENSAOCG00000014052	rnpc3	98	76.863	ENSORLG00015002179	rnpc3	100	76.863	Oryzias_latipes_hsok
ENSAOCG00000014052	rnpc3	98	78.235	ENSOMEG00000017737	rnpc3	100	78.235	Oryzias_melastigma
ENSAOCG00000014052	rnpc3	95	56.687	ENSOGAG00000026182	RNPC3	95	56.687	Otolemur_garnettii
ENSAOCG00000014052	rnpc3	95	56.773	ENSOARG00000018719	RNPC3	95	56.287	Ovis_aries
ENSAOCG00000014052	rnpc3	95	55.976	ENSPPAG00000037459	RNPC3	95	55.976	Pan_paniscus
ENSAOCG00000014052	rnpc3	96	49.701	ENSPPAG00000030278	-	97	49.701	Pan_paniscus
ENSAOCG00000014052	rnpc3	96	56.200	ENSPPRG00000020246	RNPC3	95	56.200	Panthera_pardus
ENSAOCG00000014052	rnpc3	96	56.200	ENSPTIG00000009887	RNPC3	97	56.200	Panthera_tigris_altaica
ENSAOCG00000014052	rnpc3	95	55.888	ENSPTRG00000033902	RNPC3	95	55.888	Pan_troglodytes
ENSAOCG00000014052	rnpc3	96	48.795	ENSPTRG00000044227	-	97	48.795	Pan_troglodytes
ENSAOCG00000014052	rnpc3	95	56.400	ENSPANG00000012137	RNPC3	95	56.400	Papio_anubis
ENSAOCG00000014052	rnpc3	95	46.521	ENSPANG00000029957	-	96	45.328	Papio_anubis
ENSAOCG00000014052	rnpc3	98	66.928	ENSPKIG00000008828	rnpc3	99	63.992	Paramormyrops_kingsleyae
ENSAOCG00000014052	rnpc3	64	55.224	ENSPSIG00000007396	RNPC3	99	55.522	Pelodiscus_sinensis
ENSAOCG00000014052	rnpc3	98	64.971	ENSPMGG00000011742	rnpc3	100	65.166	Periophthalmus_magnuspinnatus
ENSAOCG00000014052	rnpc3	88	54.684	ENSPEMG00000020112	Rnpc3	99	54.803	Peromyscus_maniculatus_bairdii
ENSAOCG00000014052	rnpc3	95	42.144	ENSPMAG00000003778	rnpc3	96	44.677	Petromyzon_marinus
ENSAOCG00000014052	rnpc3	95	56.942	ENSPCIG00000004415	-	95	56.942	Phascolarctos_cinereus
ENSAOCG00000014052	rnpc3	98	80.906	ENSPFOG00000009895	rnpc3	99	80.906	Poecilia_formosa
ENSAOCG00000014052	rnpc3	98	81.102	ENSPLAG00000012023	rnpc3	99	81.102	Poecilia_latipinna
ENSAOCG00000014052	rnpc3	100	79.846	ENSPMEG00000003663	rnpc3	99	81.102	Poecilia_mexicana
ENSAOCG00000014052	rnpc3	98	79.843	ENSPREG00000010206	rnpc3	100	79.843	Poecilia_reticulata
ENSAOCG00000014052	rnpc3	80	51.667	ENSPPYG00000001102	RNPC3	94	51.667	Pongo_abelii
ENSAOCG00000014052	rnpc3	98	84.843	ENSPNYG00000020603	rnpc3	99	84.843	Pundamilia_nyererei
ENSAOCG00000014052	rnpc3	99	57.795	ENSPNAG00000000524	rnpc3	93	57.605	Pygocentrus_nattereri
ENSAOCG00000014052	rnpc3	95	56.426	ENSRNOG00000017310	Rnpc3	95	56.627	Rattus_norvegicus
ENSAOCG00000014052	rnpc3	95	52.191	ENSRBIG00000043897	RNPC3	95	52.191	Rhinopithecus_bieti
ENSAOCG00000014052	rnpc3	95	56.088	ENSRROG00000032334	RNPC3	95	56.088	Rhinopithecus_roxellana
ENSAOCG00000014052	rnpc3	95	56.000	ENSSBOG00000024473	RNPC3	95	56.000	Saimiri_boliviensis_boliviensis
ENSAOCG00000014052	rnpc3	95	56.800	ENSSHAG00000011859	RNPC3	95	56.238	Sarcophilus_harrisii
ENSAOCG00000014052	rnpc3	96	71.142	ENSSFOG00015013055	rnpc3	99	71.227	Scleropages_formosus
ENSAOCG00000014052	rnpc3	98	82.136	ENSSMAG00000020346	rnpc3	100	82.136	Scophthalmus_maximus
ENSAOCG00000014052	rnpc3	98	86.745	ENSSDUG00000006600	rnpc3	100	86.745	Seriola_dumerili
ENSAOCG00000014052	rnpc3	98	86.745	ENSSLDG00000007979	rnpc3	100	86.745	Seriola_lalandi_dorsalis
ENSAOCG00000014052	rnpc3	95	52.929	ENSSPUG00000003872	-	92	52.727	Sphenodon_punctatus
ENSAOCG00000014052	rnpc3	98	89.020	ENSSPAG00000005633	rnpc3	100	89.020	Stegastes_partitus
ENSAOCG00000014052	rnpc3	95	57.000	ENSSSCG00000037254	RNPC3	95	56.200	Sus_scrofa
ENSAOCG00000014052	rnpc3	87	57.330	ENSTGUG00000004795	-	99	57.330	Taeniopygia_guttata
ENSAOCG00000014052	rnpc3	98	78.278	ENSTNIG00000018963	rnpc3	100	78.125	Tetraodon_nigroviridis
ENSAOCG00000014052	rnpc3	95	56.313	ENSUMAG00000007775	RNPC3	97	56.313	Ursus_maritimus
ENSAOCG00000014052	rnpc3	95	56.112	ENSVVUG00000000331	RNPC3	95	56.313	Vulpes_vulpes
ENSAOCG00000014052	rnpc3	95	45.365	ENSXETG00000025027	rnpc3	96	44.841	Xenopus_tropicalis
ENSAOCG00000014052	rnpc3	52	82.051	ENSXCOG00000005013	rnpc3	100	78.654	Xiphophorus_couchianus
ENSAOCG00000014052	rnpc3	98	79.804	ENSXMAG00000006495	rnpc3	100	80.626	Xiphophorus_maculatus