EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAOCG00000014166 (Gene tree)
Gene ID: 111563947
Gene Symbol: snd1
Alias: SN4TDR|TDRD11|p100L|p100S|wu:fc27g10
Full Name: staphylococcal nuclease and tudor domain containing 1
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Plus strand
Length: 216061 bases
Position: chrNXFZ01001912.1:322355-538415
Accession: 111563947
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000026100	TUDOR	PF00567.24	3.8e-26	1	1
ENSAOCP00000026100	SNase	PF00565.17	2.3e-67	1	4
ENSAOCP00000026100	SNase	PF00565.17	2.3e-67	2	4
ENSAOCP00000026100	SNase	PF00565.17	2.3e-67	3	4
ENSAOCP00000026100	SNase	PF00565.17	2.3e-67	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000016855	-	3967	XM_023263234	ENSAOCP00000026100	910 (aa)	XP_023119002	UPI000C317A80

Gene Model

Click here to download ENSAOCG00000014166's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000014166's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000014166	snd1	99	84.316	ENSG00000197157	SND1	100	83.443	Homo_sapiens
ENSAOCG00000014166	snd1	100	99.121	ENSAPOG00000017599	snd1	100	99.121	Acanthochromis_polyacanthus
ENSAOCG00000014166	snd1	100	83.479	ENSAMEG00000004664	SND1	94	83.479	Ailuropoda_melanoleuca
ENSAOCG00000014166	snd1	100	93.304	ENSACIG00000003551	snd1	100	93.304	Amphilophus_citrinellus
ENSAOCG00000014166	snd1	100	99.780	ENSAPEG00000007067	snd1	100	99.780	Amphiprion_percula
ENSAOCG00000014166	snd1	98	96.309	ENSATEG00000018475	snd1	89	96.309	Anabas_testudineus
ENSAOCG00000014166	snd1	99	84.427	ENSANAG00000034463	SND1	99	84.650	Aotus_nancymaae
ENSAOCG00000014166	snd1	100	95.060	ENSACLG00000022897	snd1	100	95.060	Astatotilapia_calliptera
ENSAOCG00000014166	snd1	99	90.879	ENSAMXG00000016318	snd1	99	90.879	Astyanax_mexicanus
ENSAOCG00000014166	snd1	99	84.650	ENSBTAG00000010692	SND1	100	83.772	Bos_taurus
ENSAOCG00000014166	snd1	99	47.154	WBGene00006626	tsn-1	99	47.154	Caenorhabditis_elegans
ENSAOCG00000014166	snd1	99	84.427	ENSCJAG00000017668	SND1	99	84.650	Callithrix_jacchus
ENSAOCG00000014166	snd1	100	83.772	ENSCAFG00000001700	SND1	100	83.772	Canis_familiaris
ENSAOCG00000014166	snd1	100	83.772	ENSCAFG00020021639	SND1	100	83.772	Canis_lupus_dingo
ENSAOCG00000014166	snd1	99	84.538	ENSCHIG00000023390	SND1	100	83.662	Capra_hircus
ENSAOCG00000014166	snd1	70	87.193	ENSTSYG00000004979	SND1	96	87.193	Carlito_syrichta
ENSAOCG00000014166	snd1	97	74.550	ENSCAPG00000010677	SND1	97	73.913	Cavia_aperea
ENSAOCG00000014166	snd1	99	84.316	ENSCPOG00000006251	SND1	100	83.443	Cavia_porcellus
ENSAOCG00000014166	snd1	99	84.427	ENSCCAG00000036847	SND1	100	83.553	Cebus_capucinus
ENSAOCG00000014166	snd1	99	84.538	ENSCATG00000035214	SND1	99	84.763	Cercocebus_atys
ENSAOCG00000014166	snd1	99	84.538	ENSCLAG00000011796	SND1	100	83.662	Chinchilla_lanigera
ENSAOCG00000014166	snd1	99	84.538	ENSCSAG00000010182	SND1	100	83.662	Chlorocebus_sabaeus
ENSAOCG00000014166	snd1	77	77.228	ENSCHOG00000002218	SND1	86	77.228	Choloepus_hoffmanni
ENSAOCG00000014166	snd1	100	83.974	ENSCPBG00000018094	SND1	100	83.974	Chrysemys_picta_bellii
ENSAOCG00000014166	snd1	98	56.700	ENSCING00000000524	-	99	55.991	Ciona_intestinalis
ENSAOCG00000014166	snd1	99	57.424	ENSCSAVG00000008807	-	99	57.221	Ciona_savignyi
ENSAOCG00000014166	snd1	99	84.538	ENSCANG00000035119	SND1	100	83.662	Colobus_angolensis_palliatus
ENSAOCG00000014166	snd1	99	84.093	ENSCGRG00001022514	Snd1	100	83.333	Cricetulus_griseus_chok1gshd
ENSAOCG00000014166	snd1	97	84.312	ENSCGRG00000012277	Snd1	99	84.312	Cricetulus_griseus_crigri
ENSAOCG00000014166	snd1	100	94.621	ENSCSEG00000008661	snd1	100	94.621	Cynoglossus_semilaevis
ENSAOCG00000014166	snd1	100	95.609	ENSCVAG00000010316	snd1	100	95.609	Cyprinodon_variegatus
ENSAOCG00000014166	snd1	100	90.033	ENSDARG00000006766	snd1	99	91.404	Danio_rerio
ENSAOCG00000014166	snd1	97	82.790	ENSDNOG00000006795	SND1	100	82.790	Dasypus_novemcinctus
ENSAOCG00000014166	snd1	99	84.316	ENSDORG00000000336	Snd1	100	83.443	Dipodomys_ordii
ENSAOCG00000014166	snd1	98	50.596	FBgn0035121	Tudor-SN	99	50.107	Drosophila_melanogaster
ENSAOCG00000014166	snd1	90	91.667	ENSETEG00000000375	SND1	92	91.667	Echinops_telfairi
ENSAOCG00000014166	snd1	60	65.445	ENSEBUG00000014201	-	84	77.174	Eptatretus_burgeri
ENSAOCG00000014166	snd1	99	83.151	ENSEASG00005008513	SND1	100	82.309	Equus_asinus_asinus
ENSAOCG00000014166	snd1	99	84.316	ENSECAG00000011451	SND1	100	83.333	Equus_caballus
ENSAOCG00000014166	snd1	100	74.232	ENSEEUG00000014737	SND1	100	74.232	Erinaceus_europaeus
ENSAOCG00000014166	snd1	99	89.560	ENSELUG00000001805	snd1	96	89.560	Esox_lucius
ENSAOCG00000014166	snd1	100	83.662	ENSFCAG00000008289	SND1	100	83.662	Felis_catus
ENSAOCG00000014166	snd1	98	84.340	ENSFDAG00000015881	SND1	100	83.224	Fukomys_damarensis
ENSAOCG00000014166	snd1	100	92.911	ENSFHEG00000004093	snd1	99	94.539	Fundulus_heteroclitus
ENSAOCG00000014166	snd1	75	83.616	ENSGMOG00000018932	snd1	66	83.616	Gadus_morhua
ENSAOCG00000014166	snd1	100	96.268	ENSGAFG00000008421	snd1	100	96.268	Gambusia_affinis
ENSAOCG00000014166	snd1	100	62.581	ENSGACG00000019793	snd1	100	62.690	Gasterosteus_aculeatus
ENSAOCG00000014166	snd1	99	84.538	ENSGGOG00000009614	SND1	99	84.763	Gorilla_gorilla
ENSAOCG00000014166	snd1	100	95.060	ENSHBUG00000019135	snd1	100	95.060	Haplochromis_burtoni
ENSAOCG00000014166	snd1	99	84.093	ENSHGLG00000003618	SND1	100	83.224	Heterocephalus_glaber_female
ENSAOCG00000014166	snd1	99	84.000	ENSHGLG00100012449	SND1	99	84.000	Heterocephalus_glaber_male
ENSAOCG00000014166	snd1	100	93.085	ENSHCOG00000005266	snd1	100	93.085	Hippocampus_comes
ENSAOCG00000014166	snd1	99	89.133	ENSIPUG00000013279	snd1	99	89.133	Ictalurus_punctatus
ENSAOCG00000014166	snd1	99	84.427	ENSSTOG00000002140	SND1	100	83.553	Ictidomys_tridecemlineatus
ENSAOCG00000014166	snd1	99	84.427	ENSJJAG00000009561	Snd1	100	83.553	Jaculus_jaculus
ENSAOCG00000014166	snd1	100	96.378	ENSKMAG00000016997	snd1	100	96.378	Kryptolebias_marmoratus
ENSAOCG00000014166	snd1	100	95.798	ENSLBEG00000013563	snd1	100	94.841	Labrus_bergylta
ENSAOCG00000014166	snd1	99	88.864	ENSLOCG00000015537	snd1	99	88.139	Lepisosteus_oculatus
ENSAOCG00000014166	snd1	100	83.662	ENSLAFG00000009696	SND1	100	83.662	Loxodonta_africana
ENSAOCG00000014166	snd1	99	84.538	ENSMFAG00000038114	SND1	99	84.763	Macaca_fascicularis
ENSAOCG00000014166	snd1	99	84.538	ENSMMUG00000015432	SND1	100	83.662	Macaca_mulatta
ENSAOCG00000014166	snd1	99	84.538	ENSMNEG00000039808	SND1	100	84.780	Macaca_nemestrina
ENSAOCG00000014166	snd1	99	84.427	ENSMLEG00000029040	SND1	100	84.667	Mandrillus_leucophaeus
ENSAOCG00000014166	snd1	100	95.609	ENSMAMG00000011739	snd1	100	95.609	Mastacembelus_armatus
ENSAOCG00000014166	snd1	100	95.060	ENSMZEG00005005681	snd1	100	95.060	Maylandia_zebra
ENSAOCG00000014166	snd1	99	84.650	ENSMICG00000000097	SND1	100	83.772	Microcebus_murinus
ENSAOCG00000014166	snd1	99	84.650	ENSMOCG00000005040	Snd1	100	83.772	Microtus_ochrogaster
ENSAOCG00000014166	snd1	100	96.158	ENSMMOG00000001795	snd1	100	96.158	Mola_mola
ENSAOCG00000014166	snd1	99	83.871	ENSMODG00000015182	SND1	100	83.004	Monodelphis_domestica
ENSAOCG00000014166	snd1	100	95.829	ENSMALG00000012071	snd1	100	95.829	Monopterus_albus
ENSAOCG00000014166	snd1	98	84.452	MGP_CAROLIEiJ_G0028159	Snd1	99	85.042	Mus_caroli
ENSAOCG00000014166	snd1	98	84.228	ENSMUSG00000001424	Snd1	100	83.224	Mus_musculus
ENSAOCG00000014166	snd1	98	84.452	MGP_PahariEiJ_G0021917	Snd1	100	85.042	Mus_pahari
ENSAOCG00000014166	snd1	98	84.452	MGP_SPRETEiJ_G0029159	Snd1	100	83.443	Mus_spretus
ENSAOCG00000014166	snd1	100	83.553	ENSMPUG00000006545	SND1	100	83.114	Mustela_putorius_furo
ENSAOCG00000014166	snd1	97	83.501	ENSMLUG00000017130	SND1	99	82.832	Myotis_lucifugus
ENSAOCG00000014166	snd1	99	84.316	ENSNGAG00000011186	Snd1	100	83.443	Nannospalax_galili
ENSAOCG00000014166	snd1	100	95.060	ENSNBRG00000006681	snd1	100	95.060	Neolamprologus_brichardi
ENSAOCG00000014166	snd1	100	83.662	ENSNLEG00000012263	SND1	100	84.780	Nomascus_leucogenys
ENSAOCG00000014166	snd1	91	91.667	ENSOPRG00000013405	SND1	92	91.667	Ochotona_princeps
ENSAOCG00000014166	snd1	99	84.538	ENSODEG00000011502	SND1	100	83.991	Octodon_degus
ENSAOCG00000014166	snd1	100	95.170	ENSONIG00000011481	snd1	97	95.170	Oreochromis_niloticus
ENSAOCG00000014166	snd1	98	83.708	ENSOANG00000000817	SND1	98	83.708	Ornithorhynchus_anatinus
ENSAOCG00000014166	snd1	100	82.895	ENSOCUG00000001620	SND1	100	82.895	Oryctolagus_cuniculus
ENSAOCG00000014166	snd1	100	93.963	ENSORLG00000015201	snd1	100	93.963	Oryzias_latipes
ENSAOCG00000014166	snd1	100	94.182	ENSORLG00020013991	snd1	100	94.182	Oryzias_latipes_hni
ENSAOCG00000014166	snd1	100	94.182	ENSORLG00015012436	snd1	100	94.182	Oryzias_latipes_hsok
ENSAOCG00000014166	snd1	100	94.402	ENSOMEG00000006406	snd1	100	94.402	Oryzias_melastigma
ENSAOCG00000014166	snd1	99	84.351	ENSOGAG00000013356	SND1	94	83.479	Otolemur_garnettii
ENSAOCG00000014166	snd1	97	82.413	ENSOARG00000002149	SND1	100	82.413	Ovis_aries
ENSAOCG00000014166	snd1	99	84.427	ENSPPAG00000042947	SND1	99	84.650	Pan_paniscus
ENSAOCG00000014166	snd1	100	83.662	ENSPPRG00000004494	SND1	100	83.662	Panthera_pardus
ENSAOCG00000014166	snd1	100	83.553	ENSPTIG00000014214	SND1	100	83.553	Panthera_tigris_altaica
ENSAOCG00000014166	snd1	99	84.427	ENSPTRG00000023911	SND1	99	84.650	Pan_troglodytes
ENSAOCG00000014166	snd1	97	84.763	ENSPANG00000011997	SND1	99	84.763	Papio_anubis
ENSAOCG00000014166	snd1	99	87.100	ENSPKIG00000023494	snd1	99	86.587	Paramormyrops_kingsleyae
ENSAOCG00000014166	snd1	92	94.378	ENSPMGG00000003629	snd1	100	94.378	Periophthalmus_magnuspinnatus
ENSAOCG00000014166	snd1	99	84.427	ENSPEMG00000010240	Snd1	100	83.553	Peromyscus_maniculatus_bairdii
ENSAOCG00000014166	snd1	97	73.702	ENSPMAG00000007915	-	99	73.589	Petromyzon_marinus
ENSAOCG00000014166	snd1	99	84.427	ENSPCIG00000011561	SND1	100	83.553	Phascolarctos_cinereus
ENSAOCG00000014166	snd1	100	95.939	ENSPFOG00000001557	snd1	100	95.939	Poecilia_formosa
ENSAOCG00000014166	snd1	100	95.939	ENSPLAG00000018459	snd1	97	95.939	Poecilia_latipinna
ENSAOCG00000014166	snd1	100	96.158	ENSPMEG00000006803	snd1	100	96.158	Poecilia_mexicana
ENSAOCG00000014166	snd1	100	95.829	ENSPREG00000002189	snd1	100	95.829	Poecilia_reticulata
ENSAOCG00000014166	snd1	91	91.667	ENSPPYG00000017972	SND1	100	91.667	Pongo_abelii
ENSAOCG00000014166	snd1	100	73.904	ENSPCAG00000011305	SND1	100	73.904	Procavia_capensis
ENSAOCG00000014166	snd1	99	84.761	ENSPCOG00000026791	SND1	100	85.006	Propithecus_coquereli
ENSAOCG00000014166	snd1	99	82.425	ENSPVAG00000013945	SND1	100	81.579	Pteropus_vampyrus
ENSAOCG00000014166	snd1	100	94.951	ENSPNYG00000000932	snd1	100	94.951	Pundamilia_nyererei
ENSAOCG00000014166	snd1	99	90.659	ENSPNAG00000001206	snd1	99	90.659	Pygocentrus_nattereri
ENSAOCG00000014166	snd1	98	84.340	ENSRNOG00000031173	Snd1	100	83.427	Rattus_norvegicus
ENSAOCG00000014166	snd1	69	87.689	ENSRBIG00000027782	-	93	87.689	Rhinopithecus_bieti
ENSAOCG00000014166	snd1	99	84.538	ENSRROG00000033020	SND1	100	83.662	Rhinopithecus_roxellana
ENSAOCG00000014166	snd1	99	84.316	ENSSBOG00000032461	SND1	99	84.537	Saimiri_boliviensis_boliviensis
ENSAOCG00000014166	snd1	98	81.236	ENSSHAG00000015359	SND1	100	81.236	Sarcophilus_harrisii
ENSAOCG00000014166	snd1	98	88.359	ENSSFOG00015001103	snd1	99	87.691	Scleropages_formosus
ENSAOCG00000014166	snd1	100	95.609	ENSSMAG00000001932	snd1	95	95.609	Scophthalmus_maximus
ENSAOCG00000014166	snd1	100	97.805	ENSSDUG00000002699	snd1	94	97.805	Seriola_dumerili
ENSAOCG00000014166	snd1	100	90.231	ENSSLDG00000001950	snd1	100	90.231	Seriola_lalandi_dorsalis
ENSAOCG00000014166	snd1	86	79.823	ENSSARG00000004877	SND1	92	79.823	Sorex_araneus
ENSAOCG00000014166	snd1	72	79.125	ENSSPUG00000017586	SND1	96	80.763	Sphenodon_punctatus
ENSAOCG00000014166	snd1	73	96.616	ENSSPAG00000021398	snd1	99	96.616	Stegastes_partitus
ENSAOCG00000014166	snd1	99	84.205	ENSSSCG00000016590	SND1	100	83.333	Sus_scrofa
ENSAOCG00000014166	snd1	100	94.128	ENSTRUG00000014067	snd1	100	93.414	Takifugu_rubripes
ENSAOCG00000014166	snd1	100	93.414	ENSTNIG00000011019	snd1	100	93.414	Tetraodon_nigroviridis
ENSAOCG00000014166	snd1	93	78.941	ENSTBEG00000003999	SND1	100	78.941	Tupaia_belangeri
ENSAOCG00000014166	snd1	99	80.200	ENSTTRG00000006059	SND1	100	79.386	Tursiops_truncatus
ENSAOCG00000014166	snd1	69	76.762	ENSUAMG00000002820	-	89	76.762	Ursus_americanus
ENSAOCG00000014166	snd1	87	83.650	ENSUAMG00000005604	-	93	83.650	Ursus_americanus
ENSAOCG00000014166	snd1	100	83.662	ENSUMAG00000005960	SND1	100	83.662	Ursus_maritimus
ENSAOCG00000014166	snd1	77	91.667	ENSVPAG00000008302	SND1	74	91.667	Vicugna_pacos
ENSAOCG00000014166	snd1	100	83.662	ENSVVUG00000007226	SND1	100	83.662	Vulpes_vulpes
ENSAOCG00000014166	snd1	97	80.158	ENSXETG00000023043	snd1	100	79.909	Xenopus_tropicalis
ENSAOCG00000014166	snd1	92	93.943	ENSXCOG00000013629	snd1	99	93.943	Xiphophorus_couchianus
ENSAOCG00000014166	snd1	100	96.817	ENSXMAG00000011469	snd1	100	96.817	Xiphophorus_maculatus