EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAOCG00000014266 (Gene tree)
Gene ID: 111588581
Gene Symbol: SMARCAL1
Alias: im:7145331|si:ch211-239d11.1
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a like 1
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Minus strand
Length: 19392 bases
Position: chrNXFZ01006003.1:37911-57302
Accession: 111588581
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000010049	ResIII	PF04851.15	4.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000016989	SMARCAL1-201	3489	XM_023299026	ENSAOCP00000010049	896 (aa)	XP_023154794	UPI000C2FF367

Gene Model

Click here to download ENSAOCG00000014266's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000014266's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000014266	SMARCAL1	98	52.197	ENSG00000138375	SMARCAL1	99	67.702	Homo_sapiens
ENSAOCG00000014266	SMARCAL1	100	93.437	ENSAPOG00000020156	SMARCAL1	98	93.437	Acanthochromis_polyacanthus
ENSAOCG00000014266	SMARCAL1	94	86.713	ENSACIG00000001500	smarcal1	97	83.400	Amphilophus_citrinellus
ENSAOCG00000014266	SMARCAL1	99	98.551	ENSAPEG00000015861	SMARCAL1	98	98.551	Amphiprion_percula
ENSAOCG00000014266	SMARCAL1	100	81.347	ENSATEG00000020624	SMARCAL1	99	81.457	Anabas_testudineus
ENSAOCG00000014266	SMARCAL1	96	55.184	ENSAPLG00000009864	SMARCAL1	98	54.470	Anas_platyrhynchos
ENSAOCG00000014266	SMARCAL1	98	54.048	ENSACAG00000004612	SMARCAL1	97	54.048	Anolis_carolinensis
ENSAOCG00000014266	SMARCAL1	100	82.262	ENSACLG00000015990	SMARCAL1	99	82.373	Astatotilapia_calliptera
ENSAOCG00000014266	SMARCAL1	98	66.667	ENSAMXG00000003350	smarcal1	96	66.554	Astyanax_mexicanus
ENSAOCG00000014266	SMARCAL1	94	62.911	ENSCPBG00000013599	SMARCAL1	82	62.911	Chrysemys_picta_bellii
ENSAOCG00000014266	SMARCAL1	71	48.899	ENSCING00000009308	-	99	48.899	Ciona_intestinalis
ENSAOCG00000014266	SMARCAL1	99	73.631	ENSCSEG00000010785	SMARCAL1	99	73.631	Cynoglossus_semilaevis
ENSAOCG00000014266	SMARCAL1	99	75.028	ENSCVAG00000018780	SMARCAL1	97	74.916	Cyprinodon_variegatus
ENSAOCG00000014266	SMARCAL1	80	47.737	ENSEBUG00000011906	SMARCAL1	72	56.597	Eptatretus_burgeri
ENSAOCG00000014266	SMARCAL1	99	75.599	ENSELUG00000010440	-	96	73.585	Esox_lucius
ENSAOCG00000014266	SMARCAL1	76	65.698	ENSFALG00000003981	SMARCAL1	71	65.698	Ficedula_albicollis
ENSAOCG00000014266	SMARCAL1	99	76.325	ENSFHEG00000008380	SMARCAL1	97	75.648	Fundulus_heteroclitus
ENSAOCG00000014266	SMARCAL1	61	75.414	ENSGMOG00000010034	smarcal1	93	75.414	Gadus_morhua
ENSAOCG00000014266	SMARCAL1	98	53.674	ENSGALG00000011475	RPL37A	96	53.781	Gallus_gallus
ENSAOCG00000014266	SMARCAL1	83	83.364	ENSGACG00000006073	SMARCAL1	100	85.661	Gasterosteus_aculeatus
ENSAOCG00000014266	SMARCAL1	73	67.328	ENSGAGG00000015660	SMARCAL1	71	67.328	Gopherus_agassizii
ENSAOCG00000014266	SMARCAL1	99	81.778	ENSHBUG00000002973	smarcal1	99	81.889	Haplochromis_burtoni
ENSAOCG00000014266	SMARCAL1	97	71.954	ENSHCOG00000017921	smarcal1	98	71.724	Hippocampus_comes
ENSAOCG00000014266	SMARCAL1	98	77.463	ENSKMAG00000012023	SMARCAL1	99	77.463	Kryptolebias_marmoratus
ENSAOCG00000014266	SMARCAL1	88	83.516	ENSLBEG00000022915	smarcal1	100	83.516	Labrus_bergylta
ENSAOCG00000014266	SMARCAL1	92	79.625	ENSLBEG00000003493	smarcal1	100	79.625	Labrus_bergylta
ENSAOCG00000014266	SMARCAL1	99	51.713	ENSLACG00000010974	SMARCAL1	97	51.699	Latimeria_chalumnae
ENSAOCG00000014266	SMARCAL1	94	63.817	ENSLOCG00000009637	smarcal1	99	64.118	Lepisosteus_oculatus
ENSAOCG00000014266	SMARCAL1	99	78.667	ENSMAMG00000000828	SMARCAL1	99	78.556	Mastacembelus_armatus
ENSAOCG00000014266	SMARCAL1	100	82.151	ENSMZEG00005007660	SMARCAL1	99	82.262	Maylandia_zebra
ENSAOCG00000014266	SMARCAL1	98	55.188	ENSMGAG00000011658	SMARCAL1	96	55.434	Meleagris_gallopavo
ENSAOCG00000014266	SMARCAL1	94	76.533	ENSMMOG00000003842	smarcal1	94	76.400	Mola_mola
ENSAOCG00000014266	SMARCAL1	98	52.039	ENSMODG00000015544	SMARCAL1	71	61.718	Monodelphis_domestica
ENSAOCG00000014266	SMARCAL1	94	87.395	ENSNBRG00000016273	smarcal1	97	83.267	Neolamprologus_brichardi
ENSAOCG00000014266	SMARCAL1	94	52.072	ENSMEUG00000004395	SMARCAL1	100	51.448	Notamacropus_eugenii
ENSAOCG00000014266	SMARCAL1	100	81.264	ENSONIG00000009036	smarcal1	100	89.134	Oreochromis_niloticus
ENSAOCG00000014266	SMARCAL1	99	75.417	ENSORLG00000016455	SMARCAL1	98	75.417	Oryzias_latipes
ENSAOCG00000014266	SMARCAL1	99	75.528	ENSORLG00020001610	SMARCAL1	98	75.528	Oryzias_latipes_hni
ENSAOCG00000014266	SMARCAL1	99	75.528	ENSORLG00015001865	SMARCAL1	98	75.528	Oryzias_latipes_hsok
ENSAOCG00000014266	SMARCAL1	99	75.250	ENSOMEG00000001845	smarcal1	98	75.139	Oryzias_melastigma
ENSAOCG00000014266	SMARCAL1	100	71.696	ENSPMGG00000019092	SMARCAL1	99	72.167	Periophthalmus_magnuspinnatus
ENSAOCG00000014266	SMARCAL1	76	61.606	ENSPCIG00000022514	SMARCAL1	72	62.404	Phascolarctos_cinereus
ENSAOCG00000014266	SMARCAL1	99	76.570	ENSPFOG00000000560	SMARCAL1	97	76.009	Poecilia_formosa
ENSAOCG00000014266	SMARCAL1	99	76.906	ENSPMEG00000018146	SMARCAL1	97	76.121	Poecilia_mexicana
ENSAOCG00000014266	SMARCAL1	61	85.648	ENSPREG00000009591	SMARCAL1	97	85.648	Poecilia_reticulata
ENSAOCG00000014266	SMARCAL1	98	66.629	ENSPNAG00000014900	smarcal1	91	66.629	Pygocentrus_nattereri
ENSAOCG00000014266	SMARCAL1	98	48.986	ENSSHAG00000013538	SMARCAL1	75	58.781	Sarcophilus_harrisii
ENSAOCG00000014266	SMARCAL1	100	79.605	ENSSMAG00000010427	SMARCAL1	99	79.934	Scophthalmus_maximus
ENSAOCG00000014266	SMARCAL1	99	83.539	ENSSDUG00000017470	SMARCAL1	95	83.539	Seriola_dumerili
ENSAOCG00000014266	SMARCAL1	100	82.561	ENSSLDG00000007224	SMARCAL1	99	82.561	Seriola_lalandi_dorsalis
ENSAOCG00000014266	SMARCAL1	84	61.868	ENSSPUG00000015369	SMARCAL1	71	65.634	Sphenodon_punctatus
ENSAOCG00000014266	SMARCAL1	94	82.881	ENSSPAG00000003742	smarcal1	99	83.117	Stegastes_partitus
ENSAOCG00000014266	SMARCAL1	77	58.140	ENSSSCG00000035501	SMARCAL1	76	58.285	Sus_scrofa
ENSAOCG00000014266	SMARCAL1	76	64.454	ENSTGUG00000005079	SMARCAL1	99	64.454	Taeniopygia_guttata
ENSAOCG00000014266	SMARCAL1	99	64.739	ENSTRUG00000010701	SMARCAL1	99	64.739	Takifugu_rubripes
ENSAOCG00000014266	SMARCAL1	100	44.551	ENSTTRG00000009001	SMARCAL1	97	44.551	Tursiops_truncatus
ENSAOCG00000014266	SMARCAL1	98	57.573	ENSXETG00000000465	smarcal1	97	57.465	Xenopus_tropicalis