EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAOCG00000014831 (Gene tree)
Gene ID: 111582930
Gene Symbol: usb1
Alias: zgc:91896
Full Name: U6 snRNA biogenesis phosphodiesterase 1
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Minus strand
Length: 12737 bases
Position: chrNXFZ01003988.1:20606-33342
Accession: 111582930
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000010603	HVSL	PF09749.9	1.8e-64	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000017718	-	1457	XM_023291815	ENSAOCP00000010603	282 (aa)	XP_023147583	UPI000C3052B7

Gene Model

Click here to download ENSAOCG00000014831's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000014831's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000014831	usb1	80	53.304	ENSG00000103005	USB1	100	54.206	Homo_sapiens
ENSAOCG00000014831	usb1	99	90.391	ENSAPOG00000011942	usb1	99	90.391	Acanthochromis_polyacanthus
ENSAOCG00000014831	usb1	99	48.399	ENSAMEG00000017205	USB1	97	49.615	Ailuropoda_melanoleuca
ENSAOCG00000014831	usb1	83	79.661	ENSACIG00000012234	usb1	99	71.277	Amphilophus_citrinellus
ENSAOCG00000014831	usb1	100	99.291	ENSAPEG00000000296	usb1	100	99.291	Amphiprion_percula
ENSAOCG00000014831	usb1	100	75.887	ENSATEG00000009348	usb1	100	75.887	Anabas_testudineus
ENSAOCG00000014831	usb1	79	55.556	ENSAPLG00000002756	USB1	99	55.556	Anas_platyrhynchos
ENSAOCG00000014831	usb1	80	51.754	ENSACAG00000015481	USB1	99	51.754	Anolis_carolinensis
ENSAOCG00000014831	usb1	80	52.863	ENSANAG00000035640	USB1	95	49.402	Aotus_nancymaae
ENSAOCG00000014831	usb1	99	76.868	ENSACLG00000020586	usb1	99	78.169	Astatotilapia_calliptera
ENSAOCG00000014831	usb1	99	57.639	ENSAMXG00000040146	usb1	95	57.639	Astyanax_mexicanus
ENSAOCG00000014831	usb1	99	48.399	ENSBTAG00000015758	USB1	90	51.681	Bos_taurus
ENSAOCG00000014831	usb1	80	54.185	ENSCJAG00000011733	USB1	95	50.598	Callithrix_jacchus
ENSAOCG00000014831	usb1	82	51.293	ENSCAFG00000008556	USB1	71	47.331	Canis_familiaris
ENSAOCG00000014831	usb1	99	46.429	ENSCAFG00020009263	USB1	85	52.655	Canis_lupus_dingo
ENSAOCG00000014831	usb1	99	47.687	ENSCHIG00000024290	USB1	97	49.609	Capra_hircus
ENSAOCG00000014831	usb1	80	52.863	ENSTSYG00000006997	USB1	86	52.863	Carlito_syrichta
ENSAOCG00000014831	usb1	79	44.196	ENSCAPG00000009057	USB1	96	44.196	Cavia_aperea
ENSAOCG00000014831	usb1	99	48.399	ENSCPOG00000014325	USB1	83	54.018	Cavia_porcellus
ENSAOCG00000014831	usb1	80	53.744	ENSCCAG00000022132	USB1	95	50.199	Cebus_capucinus
ENSAOCG00000014831	usb1	80	54.185	ENSCATG00000032174	USB1	95	50.598	Cercocebus_atys
ENSAOCG00000014831	usb1	61	53.179	ENSCLAG00000007363	USB1	87	54.902	Chinchilla_lanigera
ENSAOCG00000014831	usb1	80	53.744	ENSCSAG00000004783	USB1	95	50.199	Chlorocebus_sabaeus
ENSAOCG00000014831	usb1	81	55.217	ENSCPBG00000026943	USB1	98	50.890	Chrysemys_picta_bellii
ENSAOCG00000014831	usb1	82	32.365	ENSCSAVG00000000894	-	84	31.915	Ciona_savignyi
ENSAOCG00000014831	usb1	80	54.425	ENSCANG00000037135	USB1	86	54.425	Colobus_angolensis_palliatus
ENSAOCG00000014831	usb1	99	48.754	ENSCGRG00001011243	USB1	85	53.304	Cricetulus_griseus_chok1gshd
ENSAOCG00000014831	usb1	99	48.754	ENSCGRG00000013252	USB1	85	53.304	Cricetulus_griseus_crigri
ENSAOCG00000014831	usb1	100	69.149	ENSCSEG00000013881	usb1	99	68.070	Cynoglossus_semilaevis
ENSAOCG00000014831	usb1	79	75.439	ENSCVAG00000009252	usb1	98	75.439	Cyprinodon_variegatus
ENSAOCG00000014831	usb1	88	60.643	ENSDARG00000003841	usb1	100	56.552	Danio_rerio
ENSAOCG00000014831	usb1	99	48.239	ENSDORG00000001888	Usb1	98	49.648	Dipodomys_ordii
ENSAOCG00000014831	usb1	75	41.121	FBgn0037713	CG16790	81	40.376	Drosophila_melanogaster
ENSAOCG00000014831	usb1	99	41.053	ENSETEG00000019682	USB1	98	40.702	Echinops_telfairi
ENSAOCG00000014831	usb1	94	41.573	ENSEBUG00000005889	usb1	98	41.883	Eptatretus_burgeri
ENSAOCG00000014831	usb1	99	48.399	ENSEASG00005005484	USB1	86	53.304	Equus_asinus_asinus
ENSAOCG00000014831	usb1	99	48.571	ENSECAG00000019493	USB1	78	53.540	Equus_caballus
ENSAOCG00000014831	usb1	61	49.711	ENSEEUG00000000154	USB1	58	50.327	Erinaceus_europaeus
ENSAOCG00000014831	usb1	89	64.683	ENSELUG00000010974	usb1	99	60.638	Esox_lucius
ENSAOCG00000014831	usb1	82	51.502	ENSFCAG00000002693	USB1	87	51.502	Felis_catus
ENSAOCG00000014831	usb1	99	47.703	ENSFALG00000006876	USB1	98	48.057	Ficedula_albicollis
ENSAOCG00000014831	usb1	99	46.975	ENSFDAG00000010052	USB1	84	53.125	Fukomys_damarensis
ENSAOCG00000014831	usb1	88	68.110	ENSFHEG00000012334	usb1	98	69.291	Fundulus_heteroclitus
ENSAOCG00000014831	usb1	79	73.423	ENSGMOG00000004228	usb1	99	73.423	Gadus_morhua
ENSAOCG00000014831	usb1	89	51.984	ENSGALG00000035604	USB1	98	49.822	Gallus_gallus
ENSAOCG00000014831	usb1	99	73.077	ENSGAFG00000021890	usb1	99	71.134	Gambusia_affinis
ENSAOCG00000014831	usb1	100	68.085	ENSGACG00000003257	usb1	100	68.794	Gasterosteus_aculeatus
ENSAOCG00000014831	usb1	99	52.128	ENSGAGG00000022572	USB1	98	51.418	Gopherus_agassizii
ENSAOCG00000014831	usb1	80	53.744	ENSGGOG00000017147	USB1	95	50.199	Gorilla_gorilla
ENSAOCG00000014831	usb1	99	76.512	ENSHBUG00000009823	usb1	99	78.799	Haplochromis_burtoni
ENSAOCG00000014831	usb1	99	47.500	ENSHGLG00000016078	USB1	83	52.655	Heterocephalus_glaber_female
ENSAOCG00000014831	usb1	99	47.500	ENSHGLG00100005562	USB1	83	52.655	Heterocephalus_glaber_male
ENSAOCG00000014831	usb1	77	74.312	ENSHCOG00000015633	usb1	86	74.888	Hippocampus_comes
ENSAOCG00000014831	usb1	99	57.292	ENSIPUG00000008601	usb1	100	55.903	Ictalurus_punctatus
ENSAOCG00000014831	usb1	99	48.227	ENSSTOG00000007548	USB1	98	48.227	Ictidomys_tridecemlineatus
ENSAOCG00000014831	usb1	99	49.466	ENSJJAG00000021859	Usb1	85	54.185	Jaculus_jaculus
ENSAOCG00000014831	usb1	94	76.692	ENSKMAG00000007200	usb1	99	70.667	Kryptolebias_marmoratus
ENSAOCG00000014831	usb1	91	69.884	ENSLBEG00000008452	usb1	86	67.986	Labrus_bergylta
ENSAOCG00000014831	usb1	77	51.131	ENSLACG00000000105	USB1	86	50.400	Latimeria_chalumnae
ENSAOCG00000014831	usb1	99	51.890	ENSLOCG00000000465	usb1	99	52.297	Lepisosteus_oculatus
ENSAOCG00000014831	usb1	99	38.889	ENSLAFG00000002267	USB1	98	37.801	Loxodonta_africana
ENSAOCG00000014831	usb1	80	54.185	ENSMFAG00000003926	USB1	95	50.598	Macaca_fascicularis
ENSAOCG00000014831	usb1	80	54.185	ENSMMUG00000022669	USB1	95	50.598	Macaca_mulatta
ENSAOCG00000014831	usb1	80	53.744	ENSMNEG00000042487	USB1	95	50.199	Macaca_nemestrina
ENSAOCG00000014831	usb1	80	54.185	ENSMLEG00000028756	USB1	95	50.598	Mandrillus_leucophaeus
ENSAOCG00000014831	usb1	100	76.678	ENSMAMG00000015092	usb1	100	73.868	Mastacembelus_armatus
ENSAOCG00000014831	usb1	99	76.157	ENSMZEG00005010008	usb1	99	78.445	Maylandia_zebra
ENSAOCG00000014831	usb1	99	49.466	ENSMAUG00000007832	Usb1	85	54.185	Mesocricetus_auratus
ENSAOCG00000014831	usb1	80	53.744	ENSMICG00000004900	USB1	86	53.744	Microcebus_murinus
ENSAOCG00000014831	usb1	99	49.110	ENSMOCG00000022647	Usb1	85	54.626	Microtus_ochrogaster
ENSAOCG00000014831	usb1	80	75.556	ENSMMOG00000000490	usb1	100	64.664	Mola_mola
ENSAOCG00000014831	usb1	99	47.703	ENSMODG00000014067	USB1	99	48.936	Monodelphis_domestica
ENSAOCG00000014831	usb1	99	71.886	ENSMALG00000005930	usb1	99	74.205	Monopterus_albus
ENSAOCG00000014831	usb1	99	48.754	MGP_CAROLIEiJ_G0031421	Usb1	99	51.786	Mus_caroli
ENSAOCG00000014831	usb1	99	48.754	ENSMUSG00000031792	Usb1	99	51.786	Mus_musculus
ENSAOCG00000014831	usb1	99	49.110	MGP_PahariEiJ_G0023019	Usb1	100	53.846	Mus_pahari
ENSAOCG00000014831	usb1	99	48.754	MGP_SPRETEiJ_G0032540	Usb1	85	53.509	Mus_spretus
ENSAOCG00000014831	usb1	99	49.110	ENSMPUG00000004684	USB1	93	50.000	Mustela_putorius_furo
ENSAOCG00000014831	usb1	80	53.744	ENSMLUG00000007400	USB1	98	53.744	Myotis_lucifugus
ENSAOCG00000014831	usb1	99	50.534	ENSNGAG00000009703	Usb1	98	50.534	Nannospalax_galili
ENSAOCG00000014831	usb1	99	69.965	ENSNBRG00000008747	usb1	99	80.282	Neolamprologus_brichardi
ENSAOCG00000014831	usb1	73	54.808	ENSNLEG00000003340	USB1	93	50.862	Nomascus_leucogenys
ENSAOCG00000014831	usb1	99	49.286	ENSODEG00000016214	USB1	85	54.867	Octodon_degus
ENSAOCG00000014831	usb1	99	78.723	ENSONIG00000011063	usb1	100	77.224	Oreochromis_niloticus
ENSAOCG00000014831	usb1	79	52.000	ENSOANG00000012118	USB1	94	52.000	Ornithorhynchus_anatinus
ENSAOCG00000014831	usb1	87	77.143	ENSORLG00000012479	usb1	99	71.174	Oryzias_latipes
ENSAOCG00000014831	usb1	87	76.327	ENSORLG00020018671	usb1	99	70.107	Oryzias_latipes_hni
ENSAOCG00000014831	usb1	87	77.551	ENSORLG00015009679	usb1	99	71.174	Oryzias_latipes_hsok
ENSAOCG00000014831	usb1	99	76.157	ENSOMEG00000012930	usb1	99	76.157	Oryzias_melastigma
ENSAOCG00000014831	usb1	83	48.511	ENSOGAG00000003273	USB1	85	50.220	Otolemur_garnettii
ENSAOCG00000014831	usb1	84	51.681	ENSOARG00000001107	USB1	91	51.681	Ovis_aries
ENSAOCG00000014831	usb1	80	53.304	ENSPPAG00000042137	USB1	95	49.801	Pan_paniscus
ENSAOCG00000014831	usb1	99	46.975	ENSPPRG00000024797	USB1	95	49.012	Panthera_pardus
ENSAOCG00000014831	usb1	82	50.644	ENSPTIG00000007506	USB1	95	48.617	Panthera_tigris_altaica
ENSAOCG00000014831	usb1	76	54.673	ENSPTRG00000008172	USB1	100	54.673	Pan_troglodytes
ENSAOCG00000014831	usb1	80	54.185	ENSPANG00000025138	USB1	95	50.598	Papio_anubis
ENSAOCG00000014831	usb1	90	58.687	ENSPKIG00000015109	usb1	99	55.518	Paramormyrops_kingsleyae
ENSAOCG00000014831	usb1	79	46.903	ENSPSIG00000004305	USB1	100	46.903	Pelodiscus_sinensis
ENSAOCG00000014831	usb1	79	67.857	ENSPMGG00000017725	usb1	86	67.857	Periophthalmus_magnuspinnatus
ENSAOCG00000014831	usb1	99	49.823	ENSPEMG00000016183	Usb1	98	49.823	Peromyscus_maniculatus_bairdii
ENSAOCG00000014831	usb1	79	49.115	ENSPMAG00000000462	usb1	95	49.115	Petromyzon_marinus
ENSAOCG00000014831	usb1	99	74.205	ENSPFOG00000011130	usb1	99	74.205	Poecilia_formosa
ENSAOCG00000014831	usb1	99	73.852	ENSPLAG00000009820	usb1	99	73.852	Poecilia_latipinna
ENSAOCG00000014831	usb1	99	74.205	ENSPMEG00000006402	usb1	99	74.205	Poecilia_mexicana
ENSAOCG00000014831	usb1	88	73.307	ENSPREG00000001047	usb1	99	74.104	Poecilia_reticulata
ENSAOCG00000014831	usb1	75	50.467	ENSPPYG00000007401	USB1	94	47.059	Pongo_abelii
ENSAOCG00000014831	usb1	80	52.863	ENSPCOG00000022612	USB1	86	52.863	Propithecus_coquereli
ENSAOCG00000014831	usb1	99	47.331	ENSPVAG00000004613	USB1	86	52.232	Pteropus_vampyrus
ENSAOCG00000014831	usb1	99	76.512	ENSPNYG00000022262	usb1	99	76.512	Pundamilia_nyererei
ENSAOCG00000014831	usb1	90	59.848	ENSPNAG00000011736	usb1	100	56.757	Pygocentrus_nattereri
ENSAOCG00000014831	usb1	99	49.822	ENSRNOG00000013216	Usb1	85	54.185	Rattus_norvegicus
ENSAOCG00000014831	usb1	76	55.140	ENSRBIG00000044466	USB1	100	55.140	Rhinopithecus_bieti
ENSAOCG00000014831	usb1	80	54.185	ENSRROG00000029211	USB1	95	50.598	Rhinopithecus_roxellana
ENSAOCG00000014831	usb1	80	54.185	ENSSBOG00000029362	USB1	95	50.598	Saimiri_boliviensis_boliviensis
ENSAOCG00000014831	usb1	77	51.152	ENSSHAG00000006993	USB1	90	51.542	Sarcophilus_harrisii
ENSAOCG00000014831	usb1	79	66.816	ENSSFOG00015023663	usb1	91	58.681	Scleropages_formosus
ENSAOCG00000014831	usb1	99	71.284	ENSSMAG00000015834	usb1	99	71.284	Scophthalmus_maximus
ENSAOCG00000014831	usb1	79	82.511	ENSSDUG00000002949	usb1	99	71.174	Seriola_dumerili
ENSAOCG00000014831	usb1	99	75.445	ENSSLDG00000014174	usb1	99	75.089	Seriola_lalandi_dorsalis
ENSAOCG00000014831	usb1	76	53.271	ENSSPUG00000006741	USB1	100	53.271	Sphenodon_punctatus
ENSAOCG00000014831	usb1	100	85.211	ENSSPAG00000007484	usb1	100	85.211	Stegastes_partitus
ENSAOCG00000014831	usb1	99	49.466	ENSSSCG00000002807	USB1	98	49.466	Sus_scrofa
ENSAOCG00000014831	usb1	74	56.398	ENSTGUG00000004792	USB1	87	54.955	Taeniopygia_guttata
ENSAOCG00000014831	usb1	100	68.085	ENSTRUG00000021069	usb1	100	67.730	Takifugu_rubripes
ENSAOCG00000014831	usb1	100	58.865	ENSTNIG00000000626	usb1	98	56.294	Tetraodon_nigroviridis
ENSAOCG00000014831	usb1	79	37.946	ENSTBEG00000001507	USB1	97	37.946	Tupaia_belangeri
ENSAOCG00000014831	usb1	82	52.361	ENSUAMG00000016823	USB1	97	50.000	Ursus_americanus
ENSAOCG00000014831	usb1	76	54.206	ENSUMAG00000021369	USB1	100	54.206	Ursus_maritimus
ENSAOCG00000014831	usb1	85	50.413	ENSVVUG00000023700	USB1	87	52.655	Vulpes_vulpes
ENSAOCG00000014831	usb1	76	55.760	ENSXETG00000013795	usb1	96	52.610	Xenopus_tropicalis
ENSAOCG00000014831	usb1	91	74.419	ENSXMAG00000024687	usb1	80	72.924	Xiphophorus_maculatus