EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAOCG00000014967 (Gene tree)
Gene ID: 111579401
Gene Symbol: srsf5a
Alias: fb49e01|im:6906390|sfrs5|sfrs5a|wu:fb49e01|wu:fj09b12
Full Name: serine and arginine rich splicing factor 5
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Plus strand
Length: 9343 bases
Position: chrNXFZ01003451.1:219521-228863
Accession: 111579401
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000010747	RRM_1	PF00076.22	2.9e-33	1	2
ENSAOCP00000010747	RRM_1	PF00076.22	2.9e-33	2	2
ENSAOCP00000010747	RRM_3	PF08777.11	1.7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000017911	-	2031	XM_023286678	ENSAOCP00000010747	293 (aa)	XP_023142446	UPI000C312037

Gene Model

Click here to download ENSAOCG00000014967's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000014967's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAOCG00000014967	srsf5a	58	46.023	ENSAOCG00000000337	-	69	42.045
ENSAOCG00000014967	srsf5a	63	71.658	ENSAOCG00000005719	srsf5b	63	71.196
ENSAOCG00000014967	srsf5a	57	62.048	ENSAOCG00000005997	srsf4	91	60.843
ENSAOCG00000014967	srsf5a	75	39.301	ENSAOCG00000002992	srsf9	80	41.546
ENSAOCG00000014967	srsf5a	58	41.477	ENSAOCG00000010671	-	71	39.773

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000014967	srsf5a	100	96.000	ENSAPOG00000017395	srsf5a	100	96.000	Acanthochromis_polyacanthus
ENSAOCG00000014967	srsf5a	100	79.125	ENSACIG00000011892	srsf5a	98	87.500	Amphilophus_citrinellus
ENSAOCG00000014967	srsf5a	100	99.659	ENSAPEG00000009297	srsf5a	100	99.659	Amphiprion_percula
ENSAOCG00000014967	srsf5a	81	92.116	ENSATEG00000000198	srsf5a	82	88.285	Anabas_testudineus
ENSAOCG00000014967	srsf5a	62	78.378	ENSAPLG00000002469	-	70	74.595	Anas_platyrhynchos
ENSAOCG00000014967	srsf5a	62	78.142	ENSACAG00000029015	-	68	77.049	Anolis_carolinensis
ENSAOCG00000014967	srsf5a	80	90.535	ENSACLG00000027166	srsf5a	81	86.831	Astatotilapia_calliptera
ENSAOCG00000014967	srsf5a	62	87.831	ENSAMXG00000030476	srsf5a	67	88.108	Astyanax_mexicanus
ENSAOCG00000014967	srsf5a	62	80.978	ENSCPBG00000021518	-	70	77.596	Chrysemys_picta_bellii
ENSAOCG00000014967	srsf5a	62	55.102	ENSCSAVG00000011376	-	78	56.122	Ciona_savignyi
ENSAOCG00000014967	srsf5a	81	87.854	ENSCSEG00000008109	srsf5a	77	85.714	Cynoglossus_semilaevis
ENSAOCG00000014967	srsf5a	78	80.417	ENSCVAG00000016982	srsf5a	97	76.119	Cyprinodon_variegatus
ENSAOCG00000014967	srsf5a	84	80.876	ENSDARG00000029818	srsf5a	100	84.211	Danio_rerio
ENSAOCG00000014967	srsf5a	62	80.829	ENSELUG00000020439	srsf5a	62	79.793	Esox_lucius
ENSAOCG00000014967	srsf5a	62	77.596	ENSFALG00000005098	-	64	74.863	Ficedula_albicollis
ENSAOCG00000014967	srsf5a	82	77.132	ENSFHEG00000003955	srsf5a	97	69.655	Fundulus_heteroclitus
ENSAOCG00000014967	srsf5a	62	90.164	ENSGMOG00000000869	srsf5a	94	85.792	Gadus_morhua
ENSAOCG00000014967	srsf5a	62	78.689	ENSGALG00000033259	SRSF5A	63	75.410	Gallus_gallus
ENSAOCG00000014967	srsf5a	82	76.132	ENSGAFG00000018237	srsf5a	74	64.167	Gambusia_affinis
ENSAOCG00000014967	srsf5a	62	80.978	ENSGAGG00000007312	-	70	77.596	Gopherus_agassizii
ENSAOCG00000014967	srsf5a	80	90.496	ENSHBUG00000014048	srsf5a	81	86.777	Haplochromis_burtoni
ENSAOCG00000014967	srsf5a	81	85.950	ENSHCOG00000017557	srsf5a	80	86.364	Hippocampus_comes
ENSAOCG00000014967	srsf5a	90	65.505	ENSIPUG00000003439	srsf5a	69	84.211	Ictalurus_punctatus
ENSAOCG00000014967	srsf5a	87	70.611	ENSKMAG00000014937	srsf5a	71	79.583	Kryptolebias_marmoratus
ENSAOCG00000014967	srsf5a	62	84.615	ENSLBEG00000017153	srsf5a	74	85.641	Labrus_bergylta
ENSAOCG00000014967	srsf5a	62	84.153	ENSLACG00000017874	-	70	82.514	Latimeria_chalumnae
ENSAOCG00000014967	srsf5a	96	61.074	ENSLOCG00000014075	srsf5a	95	68.707	Lepisosteus_oculatus
ENSAOCG00000014967	srsf5a	100	90.785	ENSMAMG00000000192	srsf5a	83	86.920	Mastacembelus_armatus
ENSAOCG00000014967	srsf5a	80	90.909	ENSMZEG00005010485	srsf5a	81	87.190	Maylandia_zebra
ENSAOCG00000014967	srsf5a	65	76.020	ENSMGAG00000011888	-	96	74.545	Meleagris_gallopavo
ENSAOCG00000014967	srsf5a	100	89.369	ENSMMOG00000009793	srsf5a	78	86.441	Mola_mola
ENSAOCG00000014967	srsf5a	100	82.373	ENSMALG00000021194	srsf5a	79	82.203	Monopterus_albus
ENSAOCG00000014967	srsf5a	80	91.286	ENSNBRG00000000771	srsf5a	81	87.552	Neolamprologus_brichardi
ENSAOCG00000014967	srsf5a	80	91.286	ENSONIG00000019583	srsf5a	81	87.552	Oreochromis_niloticus
ENSAOCG00000014967	srsf5a	80	82.540	ENSORLG00000009268	srsf5a	83	82.553	Oryzias_latipes
ENSAOCG00000014967	srsf5a	80	82.540	ENSORLG00020003281	srsf5	83	82.553	Oryzias_latipes_hni
ENSAOCG00000014967	srsf5a	80	82.540	ENSORLG00015023075	srsf5	83	82.553	Oryzias_latipes_hsok
ENSAOCG00000014967	srsf5a	80	76.068	ENSOMEG00000000628	srsf5a	83	83.404	Oryzias_melastigma
ENSAOCG00000014967	srsf5a	62	86.316	ENSPKIG00000002054	srsf5a	68	87.634	Paramormyrops_kingsleyae
ENSAOCG00000014967	srsf5a	62	80.435	ENSPSIG00000008238	-	87	74.459	Pelodiscus_sinensis
ENSAOCG00000014967	srsf5a	94	74.737	ENSPMGG00000020125	srsf5a	55	83.607	Periophthalmus_magnuspinnatus
ENSAOCG00000014967	srsf5a	82	79.216	ENSPFOG00000022993	srsf5a	78	69.076	Poecilia_formosa
ENSAOCG00000014967	srsf5a	82	79.134	ENSPLAG00000005508	srsf5a	77	68.952	Poecilia_latipinna
ENSAOCG00000014967	srsf5a	82	79.608	ENSPMEG00000016339	srsf5a	78	69.076	Poecilia_mexicana
ENSAOCG00000014967	srsf5a	82	79.297	ENSPREG00000018091	srsf5a	79	68.800	Poecilia_reticulata
ENSAOCG00000014967	srsf5a	80	90.909	ENSPNYG00000021245	srsf5a	81	87.190	Pundamilia_nyererei
ENSAOCG00000014967	srsf5a	79	81.070	ENSSFOG00015008377	srsf5	66	87.634	Scleropages_formosus
ENSAOCG00000014967	srsf5a	80	81.818	ENSSMAG00000010899	srsf5a	83	86.561	Scophthalmus_maximus
ENSAOCG00000014967	srsf5a	100	92.833	ENSSDUG00000006103	srsf5a	81	87.764	Seriola_dumerili
ENSAOCG00000014967	srsf5a	100	91.246	ENSSLDG00000004146	srsf5a	80	88.186	Seriola_lalandi_dorsalis
ENSAOCG00000014967	srsf5a	62	75.956	ENSSPUG00000002052	-	68	73.224	Sphenodon_punctatus
ENSAOCG00000014967	srsf5a	100	96.928	ENSSPAG00000002821	srsf5a	100	96.928	Stegastes_partitus
ENSAOCG00000014967	srsf5a	62	78.689	ENSTGUG00000011492	-	68	74.863	Taeniopygia_guttata
ENSAOCG00000014967	srsf5a	100	84.437	ENSTRUG00000022908	srsf5a	82	84.553	Takifugu_rubripes
ENSAOCG00000014967	srsf5a	62	80.851	ENSXETG00000017937	srsf5a	72	77.660	Xenopus_tropicalis
ENSAOCG00000014967	srsf5a	82	81.967	ENSXCOG00000015338	srsf5a	78	82.353	Xiphophorus_couchianus
ENSAOCG00000014967	srsf5a	82	79.608	ENSXMAG00000012823	srsf5a	79	68.675	Xiphophorus_maculatus