EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAOCG00000015040 (Gene tree)
Gene ID: 111576863
Gene Symbol: prdm12b
Alias: zgc:101606
Full Name: PR/SET domain 12
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Plus strand
Length: 7927 bases
Position: chrNXFZ01003184.1:181651-189577
Accession: 111576863
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000010815	zf-C2H2	PF00096.26	6.1e-11	1	2
ENSAOCP00000010815	zf-C2H2	PF00096.26	6.1e-11	2	2
ENSAOCP00000010815	zf-met	PF12874.7	8e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000018022	-	1134	XM_023282811	ENSAOCP00000010815	377 (aa)	XP_023138579	-

Gene Model

Click here to download ENSAOCG00000015040's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000015040's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAOCG00000015040	prdm12b	64	40.000	ENSAOCG00000014806	prdm5	85	42.105

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000015040	prdm12b	92	79.714	ENSG00000130711	PRDM12	99	74.674	Homo_sapiens
ENSAOCG00000015040	prdm12b	100	97.135	ENSAPOG00000016051	prdm12b	100	97.135	Acanthochromis_polyacanthus
ENSAOCG00000015040	prdm12b	100	67.895	ENSAPOG00000018234	-	100	67.895	Acanthochromis_polyacanthus
ENSAOCG00000015040	prdm12b	89	81.009	ENSAMEG00000016234	PRDM12	99	81.009	Ailuropoda_melanoleuca
ENSAOCG00000015040	prdm12b	100	79.540	ENSACIG00000005193	-	100	79.795	Amphilophus_citrinellus
ENSAOCG00000015040	prdm12b	100	93.915	ENSACIG00000019578	prdm12b	100	92.857	Amphilophus_citrinellus
ENSAOCG00000015040	prdm12b	100	73.604	ENSAPEG00000022849	-	99	73.350	Amphiprion_percula
ENSAOCG00000015040	prdm12b	100	98.939	ENSAPEG00000015092	prdm12b	100	98.939	Amphiprion_percula
ENSAOCG00000015040	prdm12b	100	82.474	ENSATEG00000014595	-	100	82.474	Anabas_testudineus
ENSAOCG00000015040	prdm12b	94	79.213	ENSANAG00000020616	PRDM12	97	80.403	Aotus_nancymaae
ENSAOCG00000015040	prdm12b	100	77.556	ENSACLG00000007631	-	100	78.055	Astatotilapia_calliptera
ENSAOCG00000015040	prdm12b	100	88.594	ENSACLG00000011876	prdm12b	100	87.798	Astatotilapia_calliptera
ENSAOCG00000015040	prdm12b	100	82.677	ENSAMXG00000033665	prdm12b	100	82.940	Astyanax_mexicanus
ENSAOCG00000015040	prdm12b	100	80.902	ENSAMXG00000008540	PRDM12	100	80.637	Astyanax_mexicanus
ENSAOCG00000015040	prdm12b	92	80.571	ENSBTAG00000023797	PRDM12	99	76.316	Bos_taurus
ENSAOCG00000015040	prdm12b	92	79.714	ENSCJAG00000020540	PRDM12	99	75.789	Callithrix_jacchus
ENSAOCG00000015040	prdm12b	81	80.195	ENSCAFG00000023076	PRDM12	99	75.740	Canis_familiaris
ENSAOCG00000015040	prdm12b	92	80.286	ENSCAFG00020024046	PRDM12	99	76.316	Canis_lupus_dingo
ENSAOCG00000015040	prdm12b	92	80.286	ENSCHIG00000025005	PRDM12	99	76.316	Capra_hircus
ENSAOCG00000015040	prdm12b	86	81.155	ENSCPOG00000005901	PRDM12	95	81.155	Cavia_porcellus
ENSAOCG00000015040	prdm12b	92	79.714	ENSCCAG00000037485	PRDM12	99	75.789	Cebus_capucinus
ENSAOCG00000015040	prdm12b	92	79.714	ENSCATG00000020327	PRDM12	99	75.789	Cercocebus_atys
ENSAOCG00000015040	prdm12b	90	81.818	ENSCLAG00000005499	PRDM12	90	80.403	Chinchilla_lanigera
ENSAOCG00000015040	prdm12b	92	79.714	ENSCSAG00000014756	PRDM12	99	75.789	Chlorocebus_sabaeus
ENSAOCG00000015040	prdm12b	100	77.632	ENSCPBG00000022628	PRDM12	99	77.632	Chrysemys_picta_bellii
ENSAOCG00000015040	prdm12b	92	80.571	ENSCGRG00001015005	Prdm12	99	76.178	Cricetulus_griseus_chok1gshd
ENSAOCG00000015040	prdm12b	100	89.920	ENSCVAG00000017166	prdm12b	100	88.158	Cyprinodon_variegatus
ENSAOCG00000015040	prdm12b	100	79.744	ENSCVAG00000000944	-	100	79.744	Cyprinodon_variegatus
ENSAOCG00000015040	prdm12b	100	82.632	ENSDARG00000007430	prdm12b	100	81.579	Danio_rerio
ENSAOCG00000015040	prdm12b	89	81.871	ENSDNOG00000042302	PRDM12	99	76.115	Dasypus_novemcinctus
ENSAOCG00000015040	prdm12b	84	66.066	ENSEBUG00000016780	prdm12b	80	63.812	Eptatretus_burgeri
ENSAOCG00000015040	prdm12b	94	79.494	ENSEASG00005008472	PRDM12	99	76.316	Equus_asinus_asinus
ENSAOCG00000015040	prdm12b	94	79.494	ENSECAG00000005933	PRDM12	99	76.316	Equus_caballus
ENSAOCG00000015040	prdm12b	100	82.199	ENSELUG00000013674	PRDM12	100	83.202	Esox_lucius
ENSAOCG00000015040	prdm12b	100	82.632	ENSELUG00000009905	prdm12b	100	82.368	Esox_lucius
ENSAOCG00000015040	prdm12b	92	80.286	ENSFCAG00000043086	PRDM12	99	76.316	Felis_catus
ENSAOCG00000015040	prdm12b	100	77.632	ENSFALG00000001445	PRDM12	89	77.368	Ficedula_albicollis
ENSAOCG00000015040	prdm12b	100	89.683	ENSFHEG00000003944	prdm12b	100	88.189	Fundulus_heteroclitus
ENSAOCG00000015040	prdm12b	100	76.633	ENSFHEG00000007746	-	100	76.884	Fundulus_heteroclitus
ENSAOCG00000015040	prdm12b	100	83.636	ENSGMOG00000011797	prdm12b	100	82.552	Gadus_morhua
ENSAOCG00000015040	prdm12b	100	77.632	ENSGALG00000003895	PRDM12	99	77.368	Gallus_gallus
ENSAOCG00000015040	prdm12b	100	89.239	ENSGAFG00000010827	prdm12b	99	89.764	Gambusia_affinis
ENSAOCG00000015040	prdm12b	100	88.482	ENSGACG00000016713	prdm12b	99	87.435	Gasterosteus_aculeatus
ENSAOCG00000015040	prdm12b	100	77.632	ENSGAGG00000014083	PRDM12	99	77.632	Gopherus_agassizii
ENSAOCG00000015040	prdm12b	92	79.714	ENSGGOG00000010568	PRDM12	99	75.393	Gorilla_gorilla
ENSAOCG00000015040	prdm12b	100	93.634	ENSHBUG00000022878	prdm12b	100	91.512	Haplochromis_burtoni
ENSAOCG00000015040	prdm12b	100	77.556	ENSHBUG00000022537	-	93	78.055	Haplochromis_burtoni
ENSAOCG00000015040	prdm12b	90	81.818	ENSHGLG00000013939	PRDM12	99	75.328	Heterocephalus_glaber_female
ENSAOCG00000015040	prdm12b	90	87.246	ENSHCOG00000003663	prdm12b	100	80.303	Hippocampus_comes
ENSAOCG00000015040	prdm12b	100	72.775	ENSHCOG00000021167	-	100	71.204	Hippocampus_comes
ENSAOCG00000015040	prdm12b	100	84.211	ENSIPUG00000017053	prdm12b	100	83.947	Ictalurus_punctatus
ENSAOCG00000015040	prdm12b	100	77.719	ENSIPUG00000019544	PRDM12	100	77.719	Ictalurus_punctatus
ENSAOCG00000015040	prdm12b	94	79.272	ENSSTOG00000005986	PRDM12	86	80.692	Ictidomys_tridecemlineatus
ENSAOCG00000015040	prdm12b	90	82.111	ENSJJAG00000005424	Prdm12	98	82.111	Jaculus_jaculus
ENSAOCG00000015040	prdm12b	100	82.759	ENSKMAG00000016921	prdm12b	100	83.498	Kryptolebias_marmoratus
ENSAOCG00000015040	prdm12b	94	78.992	ENSKMAG00000021205	-	99	76.190	Kryptolebias_marmoratus
ENSAOCG00000015040	prdm12b	100	88.571	ENSLBEG00000017769	prdm12b	100	88.831	Labrus_bergylta
ENSAOCG00000015040	prdm12b	100	80.940	ENSLBEG00000007776	-	100	81.462	Labrus_bergylta
ENSAOCG00000015040	prdm12b	100	78.364	ENSLACG00000017560	PRDM12	99	77.309	Latimeria_chalumnae
ENSAOCG00000015040	prdm12b	100	83.073	ENSLOCG00000005429	prdm12b	100	83.594	Lepisosteus_oculatus
ENSAOCG00000015040	prdm12b	90	82.544	ENSLAFG00000006979	PRDM12	90	79.772	Loxodonta_africana
ENSAOCG00000015040	prdm12b	100	74.674	ENSMFAG00000040322	PRDM12	99	75.196	Macaca_fascicularis
ENSAOCG00000015040	prdm12b	92	79.714	ENSMNEG00000037234	PRDM12	99	75.789	Macaca_nemestrina
ENSAOCG00000015040	prdm12b	100	74.813	ENSMAMG00000018988	-	100	75.312	Mastacembelus_armatus
ENSAOCG00000015040	prdm12b	100	92.932	ENSMAMG00000013212	prdm12b	100	91.623	Mastacembelus_armatus
ENSAOCG00000015040	prdm12b	100	77.171	ENSMZEG00005000415	PRDM12	100	77.419	Maylandia_zebra
ENSAOCG00000015040	prdm12b	94	79.888	ENSMGAG00000005438	PRDM12	91	82.698	Meleagris_gallopavo
ENSAOCG00000015040	prdm12b	100	76.378	ENSMAUG00000013040	Prdm12	99	75.853	Mesocricetus_auratus
ENSAOCG00000015040	prdm12b	93	79.661	ENSMICG00000015480	PRDM12	99	76.053	Microcebus_murinus
ENSAOCG00000015040	prdm12b	99	76.862	ENSMOCG00000021026	Prdm12	90	80.980	Microtus_ochrogaster
ENSAOCG00000015040	prdm12b	100	77.895	ENSMODG00000012108	PRDM12	99	77.428	Monodelphis_domestica
ENSAOCG00000015040	prdm12b	84	86.335	ENSMALG00000021901	prdm12b	99	74.607	Monopterus_albus
ENSAOCG00000015040	prdm12b	92	80.571	MGP_CAROLIEiJ_G0023414	Prdm12	99	76.115	Mus_caroli
ENSAOCG00000015040	prdm12b	92	80.571	ENSMUSG00000079466	Prdm12	99	76.115	Mus_musculus
ENSAOCG00000015040	prdm12b	92	80.571	MGP_PahariEiJ_G0024871	Prdm12	99	76.115	Mus_pahari
ENSAOCG00000015040	prdm12b	92	80.571	MGP_SPRETEiJ_G0024331	Prdm12	99	76.115	Mus_spretus
ENSAOCG00000015040	prdm12b	90	82.111	ENSNGAG00000018480	Prdm12	99	75.526	Nannospalax_galili
ENSAOCG00000015040	prdm12b	100	92.328	ENSNBRG00000006727	prdm12b	100	91.270	Neolamprologus_brichardi
ENSAOCG00000015040	prdm12b	100	72.987	ENSNBRG00000024312	-	100	73.247	Neolamprologus_brichardi
ENSAOCG00000015040	prdm12b	100	69.657	ENSMEUG00000003828	PRDM12	99	69.211	Notamacropus_eugenii
ENSAOCG00000015040	prdm12b	90	82.111	ENSOPRG00000008680	PRDM12	98	82.111	Ochotona_princeps
ENSAOCG00000015040	prdm12b	94	79.213	ENSODEG00000016282	PRDM12	62	80.403	Octodon_degus
ENSAOCG00000015040	prdm12b	63	75.207	ENSOANG00000001043	PRDM12	100	74.380	Ornithorhynchus_anatinus
ENSAOCG00000015040	prdm12b	88	78.209	ENSOCUG00000008241	PRDM12	96	81.329	Oryctolagus_cuniculus
ENSAOCG00000015040	prdm12b	100	79.389	ENSORLG00000017558	-	100	78.626	Oryzias_latipes
ENSAOCG00000015040	prdm12b	100	90.052	ENSORLG00000007114	prdm12b	99	89.239	Oryzias_latipes
ENSAOCG00000015040	prdm12b	100	90.026	ENSORLG00020019565	prdm12b	99	89.764	Oryzias_latipes_hni
ENSAOCG00000015040	prdm12b	100	79.389	ENSORLG00020013167	-	100	79.644	Oryzias_latipes_hni
ENSAOCG00000015040	prdm12b	100	79.389	ENSORLG00015003435	-	100	78.626	Oryzias_latipes_hsok
ENSAOCG00000015040	prdm12b	100	88.947	ENSORLG00015007621	prdm12b	99	88.684	Oryzias_latipes_hsok
ENSAOCG00000015040	prdm12b	100	79.381	ENSOMEG00000007762	-	100	79.124	Oryzias_melastigma
ENSAOCG00000015040	prdm12b	100	88.802	ENSOMEG00000004134	prdm12b	99	88.512	Oryzias_melastigma
ENSAOCG00000015040	prdm12b	90	82.111	ENSOGAG00000007557	PRDM12	99	80.692	Otolemur_garnettii
ENSAOCG00000015040	prdm12b	80	79.538	ENSPPAG00000031506	-	99	78.317	Pan_paniscus
ENSAOCG00000015040	prdm12b	98	70.968	ENSPPRG00000023024	PRDM12	91	70.968	Panthera_pardus
ENSAOCG00000015040	prdm12b	92	79.714	ENSPTRG00000043324	-	99	75.654	Pan_troglodytes
ENSAOCG00000015040	prdm12b	92	79.714	ENSPTRG00000021475	PRDM12	99	75.654	Pan_troglodytes
ENSAOCG00000015040	prdm12b	92	79.714	ENSPANG00000025967	PRDM12	99	75.789	Papio_anubis
ENSAOCG00000015040	prdm12b	100	83.421	ENSPKIG00000007228	prdm12b	100	84.211	Paramormyrops_kingsleyae
ENSAOCG00000015040	prdm12b	94	79.552	ENSPKIG00000004305	PRDM12	94	82.301	Paramormyrops_kingsleyae
ENSAOCG00000015040	prdm12b	100	77.895	ENSPSIG00000006739	PRDM12	99	77.895	Pelodiscus_sinensis
ENSAOCG00000015040	prdm12b	100	89.390	ENSPMGG00000008867	prdm12b	99	89.655	Periophthalmus_magnuspinnatus
ENSAOCG00000015040	prdm12b	100	74.177	ENSPMGG00000002356	-	100	73.671	Periophthalmus_magnuspinnatus
ENSAOCG00000015040	prdm12b	96	77.540	ENSPEMG00000009969	Prdm12	91	80.692	Peromyscus_maniculatus_bairdii
ENSAOCG00000015040	prdm12b	100	77.632	ENSPCIG00000024119	PRDM12	99	77.165	Phascolarctos_cinereus
ENSAOCG00000015040	prdm12b	100	87.958	ENSPFOG00000019841	prdm12b	100	87.696	Poecilia_formosa
ENSAOCG00000015040	prdm12b	100	88.542	ENSPLAG00000016626	prdm12b	99	89.062	Poecilia_latipinna
ENSAOCG00000015040	prdm12b	96	88.919	ENSPMEG00000016698	prdm12b	99	89.459	Poecilia_mexicana
ENSAOCG00000015040	prdm12b	95	74.387	ENSPREG00000003211	-	94	73.569	Poecilia_reticulata
ENSAOCG00000015040	prdm12b	100	88.312	ENSPREG00000015073	prdm12b	99	88.831	Poecilia_reticulata
ENSAOCG00000015040	prdm12b	94	79.494	ENSPPYG00000019694	PRDM12	92	81.818	Pongo_abelii
ENSAOCG00000015040	prdm12b	92	80.286	ENSPCOG00000022255	PRDM12	99	76.440	Propithecus_coquereli
ENSAOCG00000015040	prdm12b	92	80.286	ENSPVAG00000001511	PRDM12	99	76.178	Pteropus_vampyrus
ENSAOCG00000015040	prdm12b	100	77.171	ENSPNYG00000013589	-	100	77.419	Pundamilia_nyererei
ENSAOCG00000015040	prdm12b	100	93.103	ENSPNYG00000009607	prdm12b	100	92.308	Pundamilia_nyererei
ENSAOCG00000015040	prdm12b	100	79.634	ENSPNAG00000013396	PRDM12	100	79.634	Pygocentrus_nattereri
ENSAOCG00000015040	prdm12b	100	83.158	ENSPNAG00000024532	prdm12b	100	82.895	Pygocentrus_nattereri
ENSAOCG00000015040	prdm12b	92	80.571	ENSRNOG00000009218	Prdm12	99	76.115	Rattus_norvegicus
ENSAOCG00000015040	prdm12b	88	81.682	ENSRBIG00000042712	PRDM12	88	81.009	Rhinopithecus_bieti
ENSAOCG00000015040	prdm12b	89	81.899	ENSRROG00000043554	PRDM12	99	81.899	Rhinopithecus_roxellana
ENSAOCG00000015040	prdm12b	100	77.428	ENSSHAG00000015972	PRDM12	99	76.702	Sarcophilus_harrisii
ENSAOCG00000015040	prdm12b	100	87.404	ENSSMAG00000003754	prdm12b	100	86.735	Scophthalmus_maximus
ENSAOCG00000015040	prdm12b	100	81.654	ENSSDUG00000019071	-	100	82.124	Seriola_dumerili
ENSAOCG00000015040	prdm12b	100	94.271	ENSSDUG00000023498	prdm12b	100	94.271	Seriola_dumerili
ENSAOCG00000015040	prdm12b	100	76.781	ENSSLDG00000013562	-	100	76.517	Seriola_lalandi_dorsalis
ENSAOCG00000015040	prdm12b	100	91.927	ENSSLDG00000009557	prdm12b	100	91.146	Seriola_lalandi_dorsalis
ENSAOCG00000015040	prdm12b	100	77.573	ENSSPUG00000013424	PRDM12	99	77.309	Sphenodon_punctatus
ENSAOCG00000015040	prdm12b	100	96.296	ENSSPAG00000018824	prdm12b	100	96.296	Stegastes_partitus
ENSAOCG00000015040	prdm12b	100	73.834	ENSSPAG00000022420	-	100	73.316	Stegastes_partitus
ENSAOCG00000015040	prdm12b	92	80.286	ENSSSCG00000005703	PRDM12	99	76.316	Sus_scrofa
ENSAOCG00000015040	prdm12b	100	89.182	ENSTRUG00000018659	prdm12b	100	87.863	Takifugu_rubripes
ENSAOCG00000015040	prdm12b	100	77.953	ENSTRUG00000013239	-	100	77.953	Takifugu_rubripes
ENSAOCG00000015040	prdm12b	100	75.789	ENSTNIG00000005859	-	99	75.000	Tetraodon_nigroviridis
ENSAOCG00000015040	prdm12b	100	88.127	ENSTNIG00000009020	prdm12b	99	86.807	Tetraodon_nigroviridis
ENSAOCG00000015040	prdm12b	92	80.286	ENSUAMG00000009653	PRDM12	90	82.111	Ursus_americanus
ENSAOCG00000015040	prdm12b	90	82.111	ENSVVUG00000027662	PRDM12	79	80.692	Vulpes_vulpes
ENSAOCG00000015040	prdm12b	100	89.974	ENSXCOG00000002836	prdm12b	99	90.237	Xiphophorus_couchianus
ENSAOCG00000015040	prdm12b	100	77.612	ENSXMAG00000028012	-	100	76.368	Xiphophorus_maculatus
ENSAOCG00000015040	prdm12b	100	88.743	ENSXMAG00000005537	prdm12b	100	89.005	Xiphophorus_maculatus