EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAOCG00000015409 (Gene tree)
Gene ID: 111568129
Gene Symbol: rpusd4
Alias: si:ch211-14i3.3|zgc:92006
Full Name: mitochondrial RNA pseudouridine synthase rpusd4-like
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Minus strand
Length: 8340 bases
Position: chrNXFZ01002147.1:75545-83884
Accession: 111568129
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000026887	PseudoU_synth_2	PF00849.22	7.5e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000030128	-	5744	XM_023269621	ENSAOCP00000026887	401 (aa)	XP_023125389	UPI000C319F92

Gene Model

Click here to download ENSAOCG00000015409's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000015409's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000015409	rpusd4	80	52.147	ENSG00000165526	RPUSD4	86	51.662	Homo_sapiens
ENSAOCG00000015409	rpusd4	98	95.696	ENSAPOG00000011024	rpusd4	99	95.696	Acanthochromis_polyacanthus
ENSAOCG00000015409	rpusd4	84	51.765	ENSAMEG00000000127	-	88	51.765	Ailuropoda_melanoleuca
ENSAOCG00000015409	rpusd4	56	57.000	ENSAMEG00000005953	-	95	57.000	Ailuropoda_melanoleuca
ENSAOCG00000015409	rpusd4	81	77.160	ENSACIG00000003533	rpusd4	96	77.160	Amphilophus_citrinellus
ENSAOCG00000015409	rpusd4	100	98.753	ENSAPEG00000018935	rpusd4	100	98.753	Amphiprion_percula
ENSAOCG00000015409	rpusd4	98	74.555	ENSATEG00000008059	rpusd4	98	74.555	Anabas_testudineus
ENSAOCG00000015409	rpusd4	70	50.000	ENSAPLG00000013250	RPUSD4	99	49.324	Anas_platyrhynchos
ENSAOCG00000015409	rpusd4	88	47.397	ENSACAG00000000189	RPUSD4	99	47.397	Anolis_carolinensis
ENSAOCG00000015409	rpusd4	83	50.595	ENSANAG00000024050	RPUSD4	89	50.595	Aotus_nancymaae
ENSAOCG00000015409	rpusd4	96	77.143	ENSACLG00000020996	rpusd4	99	77.143	Astatotilapia_calliptera
ENSAOCG00000015409	rpusd4	83	59.467	ENSAMXG00000031479	rpusd4	95	59.467	Astyanax_mexicanus
ENSAOCG00000015409	rpusd4	83	51.642	ENSBTAG00000020900	RPUSD4	87	51.796	Bos_taurus
ENSAOCG00000015409	rpusd4	83	50.882	ENSCJAG00000042850	RPUSD4	84	50.882	Callithrix_jacchus
ENSAOCG00000015409	rpusd4	85	51.156	ENSCAFG00000010488	RPUSD4	88	51.445	Canis_familiaris
ENSAOCG00000015409	rpusd4	85	51.156	ENSCAFG00020010621	RPUSD4	88	51.445	Canis_lupus_dingo
ENSAOCG00000015409	rpusd4	81	52.294	ENSCHIG00000009975	RPUSD4	87	51.488	Capra_hircus
ENSAOCG00000015409	rpusd4	83	52.395	ENSTSYG00000008456	RPUSD4	86	52.395	Carlito_syrichta
ENSAOCG00000015409	rpusd4	61	51.837	ENSCAPG00000006040	RPUSD4	93	51.837	Cavia_aperea
ENSAOCG00000015409	rpusd4	87	51.989	ENSCPOG00000014971	RPUSD4	93	51.989	Cavia_porcellus
ENSAOCG00000015409	rpusd4	81	51.829	ENSCCAG00000027838	RPUSD4	87	51.829	Cebus_capucinus
ENSAOCG00000015409	rpusd4	94	46.719	ENSCATG00000041570	RPUSD4	94	46.719	Cercocebus_atys
ENSAOCG00000015409	rpusd4	83	53.687	ENSCLAG00000016553	RPUSD4	88	53.687	Chinchilla_lanigera
ENSAOCG00000015409	rpusd4	94	48.042	ENSCSAG00000002274	RPUSD4	94	48.042	Chlorocebus_sabaeus
ENSAOCG00000015409	rpusd4	70	52.837	ENSCHOG00000010249	RPUSD4	98	52.837	Choloepus_hoffmanni
ENSAOCG00000015409	rpusd4	71	52.595	ENSCPBG00000011175	RPUSD4	99	52.595	Chrysemys_picta_bellii
ENSAOCG00000015409	rpusd4	79	36.778	ENSCSAVG00000000872	-	63	36.778	Ciona_savignyi
ENSAOCG00000015409	rpusd4	87	49.148	ENSCANG00000039684	RPUSD4	90	49.148	Colobus_angolensis_palliatus
ENSAOCG00000015409	rpusd4	85	50.289	ENSCGRG00001024141	Rpusd4	90	50.289	Cricetulus_griseus_chok1gshd
ENSAOCG00000015409	rpusd4	85	50.289	ENSCGRG00000014415	Rpusd4	90	50.289	Cricetulus_griseus_crigri
ENSAOCG00000015409	rpusd4	97	68.702	ENSCVAG00000008761	rpusd4	99	68.702	Cyprinodon_variegatus
ENSAOCG00000015409	rpusd4	97	68.448	ENSCVAG00000000392	rpusd4	98	73.837	Cyprinodon_variegatus
ENSAOCG00000015409	rpusd4	86	55.429	ENSDARG00000012674	rpusd4	95	55.429	Danio_rerio
ENSAOCG00000015409	rpusd4	85	50.720	ENSDNOG00000020026	RPUSD4	91	50.720	Dasypus_novemcinctus
ENSAOCG00000015409	rpusd4	83	49.853	ENSDORG00000016717	Rpusd4	88	50.147	Dipodomys_ordii
ENSAOCG00000015409	rpusd4	83	51.796	ENSETEG00000013953	RPUSD4	91	50.581	Echinops_telfairi
ENSAOCG00000015409	rpusd4	85	50.291	ENSEASG00005022982	RPUSD4	90	50.291	Equus_asinus_asinus
ENSAOCG00000015409	rpusd4	85	50.291	ENSECAG00000000557	RPUSD4	90	50.291	Equus_caballus
ENSAOCG00000015409	rpusd4	64	55.801	ENSEEUG00000014036	RPUSD4	68	55.801	Erinaceus_europaeus
ENSAOCG00000015409	rpusd4	92	62.992	ENSELUG00000008075	rpusd4	99	62.992	Esox_lucius
ENSAOCG00000015409	rpusd4	81	51.524	ENSFCAG00000029789	RPUSD4	86	51.524	Felis_catus
ENSAOCG00000015409	rpusd4	80	48.308	ENSFALG00000005171	RPUSD4	95	48.308	Ficedula_albicollis
ENSAOCG00000015409	rpusd4	90	50.000	ENSFDAG00000014307	RPUSD4	97	50.000	Fukomys_damarensis
ENSAOCG00000015409	rpusd4	97	73.008	ENSFHEG00000004329	rpusd4	99	73.008	Fundulus_heteroclitus
ENSAOCG00000015409	rpusd4	80	65.217	ENSGMOG00000017726	rpusd4	99	63.253	Gadus_morhua
ENSAOCG00000015409	rpusd4	70	52.837	ENSGALG00000024326	RPUSD4	93	48.640	Gallus_gallus
ENSAOCG00000015409	rpusd4	97	69.289	ENSGAFG00000021559	rpusd4	99	69.289	Gambusia_affinis
ENSAOCG00000015409	rpusd4	84	75.595	ENSGACG00000001657	rpusd4	100	75.595	Gasterosteus_aculeatus
ENSAOCG00000015409	rpusd4	87	49.143	ENSGAGG00000000132	RPUSD4	96	49.143	Gopherus_agassizii
ENSAOCG00000015409	rpusd4	80	52.454	ENSGGOG00000016494	RPUSD4	86	51.964	Gorilla_gorilla
ENSAOCG00000015409	rpusd4	96	76.883	ENSHBUG00000022838	rpusd4	99	76.883	Haplochromis_burtoni
ENSAOCG00000015409	rpusd4	85	51.453	ENSHGLG00000002285	RPUSD4	90	51.453	Heterocephalus_glaber_female
ENSAOCG00000015409	rpusd4	85	51.453	ENSHGLG00100006385	RPUSD4	90	51.453	Heterocephalus_glaber_male
ENSAOCG00000015409	rpusd4	96	70.801	ENSHCOG00000006612	rpusd4	99	70.801	Hippocampus_comes
ENSAOCG00000015409	rpusd4	86	56.160	ENSIPUG00000023879	rusd4	90	56.160	Ictalurus_punctatus
ENSAOCG00000015409	rpusd4	83	52.836	ENSSTOG00000025280	RPUSD4	91	52.836	Ictidomys_tridecemlineatus
ENSAOCG00000015409	rpusd4	82	52.711	ENSJJAG00000018673	Rpusd4	88	52.711	Jaculus_jaculus
ENSAOCG00000015409	rpusd4	97	70.153	ENSKMAG00000021805	rpusd4	100	70.153	Kryptolebias_marmoratus
ENSAOCG00000015409	rpusd4	93	72.774	ENSLBEG00000020394	rpusd4	93	81.818	Labrus_bergylta
ENSAOCG00000015409	rpusd4	80	53.354	ENSLACG00000011028	RPUSD4	90	50.833	Latimeria_chalumnae
ENSAOCG00000015409	rpusd4	85	45.665	ENSLOCG00000003124	rpusd4	92	45.665	Lepisosteus_oculatus
ENSAOCG00000015409	rpusd4	81	51.506	ENSLAFG00000005211	RPUSD4	100	44.746	Loxodonta_africana
ENSAOCG00000015409	rpusd4	94	46.982	ENSMFAG00000039513	RPUSD4	94	46.982	Macaca_fascicularis
ENSAOCG00000015409	rpusd4	94	46.719	ENSMMUG00000007933	RPUSD4	94	46.719	Macaca_mulatta
ENSAOCG00000015409	rpusd4	94	46.982	ENSMNEG00000027414	RPUSD4	94	46.982	Macaca_nemestrina
ENSAOCG00000015409	rpusd4	94	46.982	ENSMLEG00000042461	RPUSD4	94	46.982	Mandrillus_leucophaeus
ENSAOCG00000015409	rpusd4	97	74.555	ENSMAMG00000023839	rpusd4	99	74.555	Mastacembelus_armatus
ENSAOCG00000015409	rpusd4	96	76.883	ENSMZEG00005011999	rpusd4	99	76.883	Maylandia_zebra
ENSAOCG00000015409	rpusd4	69	51.786	ENSMGAG00000000840	RPUSD4	98	48.148	Meleagris_gallopavo
ENSAOCG00000015409	rpusd4	83	50.298	ENSMAUG00000010280	Rpusd4	88	50.298	Mesocricetus_auratus
ENSAOCG00000015409	rpusd4	84	52.059	ENSMICG00000015979	RPUSD4	97	52.147	Microcebus_murinus
ENSAOCG00000015409	rpusd4	85	49.419	ENSMOCG00000000661	Rpusd4	90	49.419	Microtus_ochrogaster
ENSAOCG00000015409	rpusd4	78	80.386	ENSMMOG00000021731	rpusd4	93	80.386	Mola_mola
ENSAOCG00000015409	rpusd4	79	54.375	ENSMODG00000004521	RPUSD4	81	54.375	Monodelphis_domestica
ENSAOCG00000015409	rpusd4	76	82.026	ENSMALG00000005839	rpusd4	97	78.997	Monopterus_albus
ENSAOCG00000015409	rpusd4	83	50.595	MGP_CAROLIEiJ_G0031954	Rpusd4	88	50.595	Mus_caroli
ENSAOCG00000015409	rpusd4	83	50.893	ENSMUSG00000032044	Rpusd4	88	50.893	Mus_musculus
ENSAOCG00000015409	rpusd4	85	49.709	MGP_PahariEiJ_G0014819	Rpusd4	90	49.709	Mus_pahari
ENSAOCG00000015409	rpusd4	82	50.599	MGP_SPRETEiJ_G0033078	Rpusd4	87	50.599	Mus_spretus
ENSAOCG00000015409	rpusd4	84	51.471	ENSMPUG00000006608	RPUSD4	88	51.471	Mustela_putorius_furo
ENSAOCG00000015409	rpusd4	64	51.550	ENSMLUG00000029348	-	99	51.550	Myotis_lucifugus
ENSAOCG00000015409	rpusd4	79	53.125	ENSMLUG00000017328	-	83	53.125	Myotis_lucifugus
ENSAOCG00000015409	rpusd4	85	52.601	ENSNGAG00000020847	Rpusd4	90	52.601	Nannospalax_galili
ENSAOCG00000015409	rpusd4	81	80.495	ENSNBRG00000005207	rpusd4	94	80.495	Neolamprologus_brichardi
ENSAOCG00000015409	rpusd4	83	50.595	ENSNLEG00000007465	RPUSD4	88	50.595	Nomascus_leucogenys
ENSAOCG00000015409	rpusd4	81	53.495	ENSMEUG00000004370	RPUSD4	87	53.495	Notamacropus_eugenii
ENSAOCG00000015409	rpusd4	83	52.507	ENSODEG00000004577	RPUSD4	88	52.507	Octodon_degus
ENSAOCG00000015409	rpusd4	96	77.922	ENSONIG00000018879	rpusd4	99	77.922	Oreochromis_niloticus
ENSAOCG00000015409	rpusd4	73	50.000	ENSOANG00000007247	RPUSD4	95	49.834	Ornithorhynchus_anatinus
ENSAOCG00000015409	rpusd4	83	52.212	ENSOCUG00000017039	RPUSD4	89	52.212	Oryctolagus_cuniculus
ENSAOCG00000015409	rpusd4	97	67.775	ENSORLG00000002750	rpusd4	93	74.041	Oryzias_latipes
ENSAOCG00000015409	rpusd4	90	70.994	ENSORLG00020002044	rpusd4	96	67.784	Oryzias_latipes_hni
ENSAOCG00000015409	rpusd4	92	69.919	ENSORLG00015020034	rpusd4	96	67.092	Oryzias_latipes_hsok
ENSAOCG00000015409	rpusd4	96	70.390	ENSOMEG00000004861	rpusd4	96	70.390	Oryzias_melastigma
ENSAOCG00000015409	rpusd4	81	53.354	ENSOGAG00000008922	RPUSD4	89	51.884	Otolemur_garnettii
ENSAOCG00000015409	rpusd4	81	52.294	ENSOARG00000012238	RPUSD4	87	51.488	Ovis_aries
ENSAOCG00000015409	rpusd4	80	52.147	ENSPPAG00000042883	RPUSD4	80	51.662	Pan_paniscus
ENSAOCG00000015409	rpusd4	81	51.524	ENSPPRG00000003081	RPUSD4	86	51.524	Panthera_pardus
ENSAOCG00000015409	rpusd4	81	51.524	ENSPTIG00000012059	RPUSD4	87	52.581	Panthera_tigris_altaica
ENSAOCG00000015409	rpusd4	80	52.147	ENSPTRG00000004454	RPUSD4	86	51.662	Pan_troglodytes
ENSAOCG00000015409	rpusd4	94	46.719	ENSPANG00000015040	RPUSD4	94	46.719	Papio_anubis
ENSAOCG00000015409	rpusd4	86	57.835	ENSPKIG00000023986	rpusd4	90	57.835	Paramormyrops_kingsleyae
ENSAOCG00000015409	rpusd4	75	53.289	ENSPSIG00000014268	RPUSD4	96	53.289	Pelodiscus_sinensis
ENSAOCG00000015409	rpusd4	83	70.659	ENSPMGG00000002806	rpusd4	93	69.277	Periophthalmus_magnuspinnatus
ENSAOCG00000015409	rpusd4	83	44.543	ENSPEMG00000000278	Rpusd4	88	44.543	Peromyscus_maniculatus_bairdii
ENSAOCG00000015409	rpusd4	75	40.303	ENSPMAG00000008183	rpusd4	95	40.303	Petromyzon_marinus
ENSAOCG00000015409	rpusd4	83	52.976	ENSPCIG00000010212	RPUSD4	91	52.976	Phascolarctos_cinereus
ENSAOCG00000015409	rpusd4	92	70.899	ENSPFOG00000019030	rpusd4	99	70.899	Poecilia_formosa
ENSAOCG00000015409	rpusd4	97	69.367	ENSPLAG00000016848	rpusd4	99	69.367	Poecilia_latipinna
ENSAOCG00000015409	rpusd4	97	68.354	ENSPMEG00000017534	rpusd4	99	68.354	Poecilia_mexicana
ENSAOCG00000015409	rpusd4	93	68.421	ENSPREG00000005689	rpusd4	97	68.421	Poecilia_reticulata
ENSAOCG00000015409	rpusd4	84	50.585	ENSPPYG00000004043	RPUSD4	88	50.585	Pongo_abelii
ENSAOCG00000015409	rpusd4	65	54.217	ENSPCAG00000000753	RPUSD4	70	54.217	Procavia_capensis
ENSAOCG00000015409	rpusd4	81	48.485	ENSPCOG00000020694	RPUSD4	87	48.485	Propithecus_coquereli
ENSAOCG00000015409	rpusd4	84	51.471	ENSPVAG00000000988	RPUSD4	89	51.471	Pteropus_vampyrus
ENSAOCG00000015409	rpusd4	96	76.364	ENSPNYG00000009652	rpusd4	99	76.364	Pundamilia_nyererei
ENSAOCG00000015409	rpusd4	81	60.736	ENSPNAG00000012264	rpusd4	86	60.736	Pygocentrus_nattereri
ENSAOCG00000015409	rpusd4	82	51.198	ENSRNOG00000011567	Rpusd4	87	51.198	Rattus_norvegicus
ENSAOCG00000015409	rpusd4	86	49.280	ENSRBIG00000034842	RPUSD4	90	48.864	Rhinopithecus_bieti
ENSAOCG00000015409	rpusd4	86	49.280	ENSRROG00000039753	RPUSD4	90	48.864	Rhinopithecus_roxellana
ENSAOCG00000015409	rpusd4	83	50.595	ENSSBOG00000030413	RPUSD4	89	50.595	Saimiri_boliviensis_boliviensis
ENSAOCG00000015409	rpusd4	76	54.248	ENSSHAG00000008304	RPUSD4	99	54.248	Sarcophilus_harrisii
ENSAOCG00000015409	rpusd4	81	58.788	ENSSFOG00015006203	rpusd4	89	58.788	Scleropages_formosus
ENSAOCG00000015409	rpusd4	97	72.093	ENSSMAG00000020978	rpusd4	99	72.679	Scophthalmus_maximus
ENSAOCG00000015409	rpusd4	96	76.104	ENSSDUG00000013399	rpusd4	100	76.104	Seriola_dumerili
ENSAOCG00000015409	rpusd4	96	76.364	ENSSLDG00000023507	rpusd4	100	76.364	Seriola_lalandi_dorsalis
ENSAOCG00000015409	rpusd4	74	53.846	ENSSPUG00000001401	RPUSD4	90	51.368	Sphenodon_punctatus
ENSAOCG00000015409	rpusd4	97	83.805	ENSSPAG00000012163	rpusd4	99	83.805	Stegastes_partitus
ENSAOCG00000015409	rpusd4	86	50.289	ENSSSCG00000015233	RPUSD4	89	50.289	Sus_scrofa
ENSAOCG00000015409	rpusd4	75	49.834	ENSTGUG00000000773	RPUSD4	99	49.834	Taeniopygia_guttata
ENSAOCG00000015409	rpusd4	97	67.095	ENSTRUG00000012283	rpusd4	100	67.095	Takifugu_rubripes
ENSAOCG00000015409	rpusd4	95	66.841	ENSTNIG00000014676	rpusd4	98	66.841	Tetraodon_nigroviridis
ENSAOCG00000015409	rpusd4	83	51.320	ENSTTRG00000001555	RPUSD4	88	51.320	Tursiops_truncatus
ENSAOCG00000015409	rpusd4	84	51.765	ENSUMAG00000002219	RPUSD4	88	51.765	Ursus_maritimus
ENSAOCG00000015409	rpusd4	55	48.869	ENSVPAG00000001066	RPUSD4	88	48.523	Vicugna_pacos
ENSAOCG00000015409	rpusd4	85	51.156	ENSVVUG00000020101	RPUSD4	88	51.445	Vulpes_vulpes
ENSAOCG00000015409	rpusd4	97	69.036	ENSXCOG00000004676	rpusd4	99	69.036	Xiphophorus_couchianus
ENSAOCG00000015409	rpusd4	97	68.782	ENSXMAG00000023351	rpusd4	99	68.782	Xiphophorus_maculatus