EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAOCG00000015447 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: probable ATP-dependent RNA helicase DDX56
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Plus strand
Length: 8484 bases
Position: chrNXFZ01004736.1:22661-31144
Accession: 111586102
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000026921	ResIII	PF04851.15	5.8e-07	1	1
ENSAOCP00000026921	DEAD	PF00270.29	4e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000018455	-	1674	XM_023295798	ENSAOCP00000026921	557 (aa)	XP_023151566	-

Gene Model

Click here to download ENSAOCG00000015447's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000015447's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAOCG00000015447	-	73	30.508	ENSAOCG00000007983	ddx52	61	30.024
ENSAOCG00000015447	-	87	100.000	ENSAOCG00000018059	ddx56	91	100.000
ENSAOCG00000015447	-	75	31.265	ENSAOCG00000021035	ddx27	50	30.695
ENSAOCG00000015447	-	73	30.508	ENSAOCG00000000356	-	52	30.024
ENSAOCG00000015447	-	71	31.078	ENSAOCG00000015213	ddx47	73	31.172

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000015447	-	87	67.008	ENSG00000136271	DDX56	98	67.956	Homo_sapiens
ENSAOCG00000015447	-	87	98.566	ENSAPOG00000017113	ddx56	87	98.566	Acanthochromis_polyacanthus
ENSAOCG00000015447	-	87	66.324	ENSAMEG00000017711	DDX56	88	66.324	Ailuropoda_melanoleuca
ENSAOCG00000015447	-	87	74.642	ENSACIG00000013747	ddx56	99	86.813	Amphilophus_citrinellus
ENSAOCG00000015447	-	87	99.384	ENSAPEG00000007267	ddx56	87	99.384	Amphiprion_percula
ENSAOCG00000015447	-	87	89.938	ENSATEG00000005279	ddx56	87	89.938	Anabas_testudineus
ENSAOCG00000015447	-	87	88.296	ENSACLG00000020113	ddx56	87	88.296	Astatotilapia_calliptera
ENSAOCG00000015447	-	88	79.226	ENSAMXG00000019357	ddx56	88	79.472	Astyanax_mexicanus
ENSAOCG00000015447	-	87	67.146	ENSBTAG00000010602	DDX56	88	67.146	Bos_taurus
ENSAOCG00000015447	-	87	42.052	WBGene00016073	C24H12.4	76	41.010	Caenorhabditis_elegans
ENSAOCG00000015447	-	87	67.213	ENSCJAG00000012233	DDX56	88	67.213	Callithrix_jacchus
ENSAOCG00000015447	-	70	64.706	ENSCAFG00000029295	DDX56	86	64.962	Canis_familiaris
ENSAOCG00000015447	-	87	65.503	ENSCAFG00020019695	DDX56	90	65.708	Canis_lupus_dingo
ENSAOCG00000015447	-	87	67.146	ENSCHIG00000014261	DDX56	88	67.146	Capra_hircus
ENSAOCG00000015447	-	87	67.146	ENSTSYG00000008048	DDX56	88	67.146	Carlito_syrichta
ENSAOCG00000015447	-	74	66.667	ENSCAPG00000006286	DDX56	86	66.425	Cavia_aperea
ENSAOCG00000015447	-	87	67.967	ENSCPOG00000003359	DDX56	88	67.762	Cavia_porcellus
ENSAOCG00000015447	-	87	66.393	ENSCCAG00000025303	DDX56	88	66.393	Cebus_capucinus
ENSAOCG00000015447	-	87	66.803	ENSCATG00000039389	DDX56	88	66.803	Cercocebus_atys
ENSAOCG00000015447	-	87	66.940	ENSCLAG00000007666	DDX56	88	66.735	Chinchilla_lanigera
ENSAOCG00000015447	-	87	66.803	ENSCSAG00000015636	DDX56	88	66.803	Chlorocebus_sabaeus
ENSAOCG00000015447	-	86	72.840	ENSCPBG00000024556	DDX56	86	72.634	Chrysemys_picta_bellii
ENSAOCG00000015447	-	91	58.869	ENSCING00000005185	-	94	60.896	Ciona_intestinalis
ENSAOCG00000015447	-	87	60.986	ENSCSAVG00000011266	-	96	61.031	Ciona_savignyi
ENSAOCG00000015447	-	87	66.803	ENSCANG00000028187	DDX56	88	66.803	Colobus_angolensis_palliatus
ENSAOCG00000015447	-	87	66.735	ENSCGRG00001019019	Ddx56	88	66.735	Cricetulus_griseus_chok1gshd
ENSAOCG00000015447	-	87	66.735	ENSCGRG00000011870	Ddx56	88	66.735	Cricetulus_griseus_crigri
ENSAOCG00000015447	-	87	87.269	ENSCSEG00000008368	ddx56	87	87.269	Cynoglossus_semilaevis
ENSAOCG00000015447	-	87	87.269	ENSCVAG00000006499	ddx56	87	87.910	Cyprinodon_variegatus
ENSAOCG00000015447	-	87	83.778	ENSDARG00000020913	ddx56	87	83.778	Danio_rerio
ENSAOCG00000015447	-	74	65.217	ENSDNOG00000036526	DDX56	85	64.976	Dasypus_novemcinctus
ENSAOCG00000015447	-	87	51.943	FBgn0001565	Hlc	86	51.943	Drosophila_melanogaster
ENSAOCG00000015447	-	84	43.830	ENSETEG00000019559	-	97	43.830	Echinops_telfairi
ENSAOCG00000015447	-	64	75.000	ENSETEG00000002969	-	64	75.000	Echinops_telfairi
ENSAOCG00000015447	-	87	67.894	ENSEBUG00000009986	ddx56	88	68.507	Eptatretus_burgeri
ENSAOCG00000015447	-	87	66.324	ENSEASG00005017795	DDX56	88	66.324	Equus_asinus_asinus
ENSAOCG00000015447	-	87	66.119	ENSECAG00000019897	DDX56	88	66.119	Equus_caballus
ENSAOCG00000015447	-	74	66.262	ENSEEUG00000004849	DDX56	86	66.262	Erinaceus_europaeus
ENSAOCG00000015447	-	91	84.646	ENSELUG00000004150	ddx56	87	87.680	Esox_lucius
ENSAOCG00000015447	-	90	64.008	ENSFCAG00000010261	DDX56	88	66.119	Felis_catus
ENSAOCG00000015447	-	87	66.940	ENSFDAG00000007128	DDX56	88	66.735	Fukomys_damarensis
ENSAOCG00000015447	-	87	87.269	ENSFHEG00000018008	ddx56	93	88.320	Fundulus_heteroclitus
ENSAOCG00000015447	-	87	82.618	ENSGAFG00000006906	ddx56	91	83.027	Gambusia_affinis
ENSAOCG00000015447	-	86	72.671	ENSGAGG00000006789	DDX56	85	72.464	Gopherus_agassizii
ENSAOCG00000015447	-	87	67.008	ENSGGOG00000012031	DDX56	88	67.008	Gorilla_gorilla
ENSAOCG00000015447	-	87	82.546	ENSHBUG00000015246	ddx56	87	82.546	Haplochromis_burtoni
ENSAOCG00000015447	-	87	66.119	ENSHGLG00000017271	DDX56	88	66.119	Heterocephalus_glaber_female
ENSAOCG00000015447	-	87	66.119	ENSHGLG00100015731	DDX56	88	66.119	Heterocephalus_glaber_male
ENSAOCG00000015447	-	87	87.680	ENSHCOG00000001685	ddx56	87	86.858	Hippocampus_comes
ENSAOCG00000015447	-	94	75.382	ENSIPUG00000006602	ddx56	86	79.346	Ictalurus_punctatus
ENSAOCG00000015447	-	87	67.351	ENSSTOG00000000464	DDX56	88	67.146	Ictidomys_tridecemlineatus
ENSAOCG00000015447	-	87	66.940	ENSJJAG00000014269	Ddx56	88	66.735	Jaculus_jaculus
ENSAOCG00000015447	-	87	87.730	ENSKMAG00000016611	ddx56	93	87.526	Kryptolebias_marmoratus
ENSAOCG00000015447	-	87	90.144	ENSLBEG00000026281	ddx56	90	89.167	Labrus_bergylta
ENSAOCG00000015447	-	87	74.896	ENSLACG00000015551	DDX56	85	75.983	Latimeria_chalumnae
ENSAOCG00000015447	-	87	81.762	ENSLOCG00000015185	ddx56	87	81.557	Lepisosteus_oculatus
ENSAOCG00000015447	-	87	66.735	ENSLAFG00000018206	DDX56	88	66.735	Loxodonta_africana
ENSAOCG00000015447	-	87	66.803	ENSMFAG00000041001	DDX56	88	66.803	Macaca_fascicularis
ENSAOCG00000015447	-	87	66.803	ENSMMUG00000002645	DDX56	88	66.803	Macaca_mulatta
ENSAOCG00000015447	-	87	66.803	ENSMNEG00000028492	DDX56	88	66.803	Macaca_nemestrina
ENSAOCG00000015447	-	87	67.008	ENSMLEG00000043591	DDX56	88	67.008	Mandrillus_leucophaeus
ENSAOCG00000015447	-	87	88.912	ENSMAMG00000007776	ddx56	87	90.144	Mastacembelus_armatus
ENSAOCG00000015447	-	87	88.296	ENSMZEG00005009813	ddx56	87	88.296	Maylandia_zebra
ENSAOCG00000015447	-	87	67.146	ENSMICG00000005550	DDX56	88	67.146	Microcebus_murinus
ENSAOCG00000015447	-	87	65.503	ENSMOCG00000016782	Ddx56	88	65.503	Microtus_ochrogaster
ENSAOCG00000015447	-	87	91.207	ENSMMOG00000009654	ddx56	93	91.207	Mola_mola
ENSAOCG00000015447	-	87	61.759	ENSMODG00000016137	DDX56	86	61.759	Monodelphis_domestica
ENSAOCG00000015447	-	68	80.208	ENSMALG00000016910	ddx56	99	80.208	Monopterus_albus
ENSAOCG00000015447	-	87	65.503	MGP_CAROLIEiJ_G0016069	Ddx56	96	65.984	Mus_caroli
ENSAOCG00000015447	-	87	65.708	ENSMUSG00000004393	Ddx56	96	66.393	Mus_musculus
ENSAOCG00000015447	-	87	65.503	MGP_PahariEiJ_G0016822	Ddx56	97	65.984	Mus_pahari
ENSAOCG00000015447	-	87	65.708	MGP_SPRETEiJ_G0016911	Ddx56	96	66.393	Mus_spretus
ENSAOCG00000015447	-	87	66.119	ENSMPUG00000018196	DDX56	77	66.119	Mustela_putorius_furo
ENSAOCG00000015447	-	87	66.119	ENSMLUG00000003509	DDX56	88	66.119	Myotis_lucifugus
ENSAOCG00000015447	-	87	67.762	ENSNGAG00000018785	Ddx56	88	67.762	Nannospalax_galili
ENSAOCG00000015447	-	87	80.493	ENSNBRG00000002656	ddx56	87	80.493	Neolamprologus_brichardi
ENSAOCG00000015447	-	87	67.213	ENSNLEG00000003816	DDX56	88	67.213	Nomascus_leucogenys
ENSAOCG00000015447	-	87	60.656	ENSMEUG00000006788	DDX56	97	60.656	Notamacropus_eugenii
ENSAOCG00000015447	-	87	65.361	ENSOPRG00000000292	-	87	65.773	Ochotona_princeps
ENSAOCG00000015447	-	68	66.227	ENSODEG00000014807	DDX56	99	65.963	Octodon_degus
ENSAOCG00000015447	-	87	84.600	ENSONIG00000011509	ddx56	89	85.216	Oreochromis_niloticus
ENSAOCG00000015447	-	73	56.235	ENSOANG00000015987	-	94	56.235	Ornithorhynchus_anatinus
ENSAOCG00000015447	-	84	57.474	ENSOANG00000006320	-	87	58.105	Ornithorhynchus_anatinus
ENSAOCG00000015447	-	50	63.177	ENSOANG00000010592	-	99	63.177	Ornithorhynchus_anatinus
ENSAOCG00000015447	-	87	67.010	ENSOCUG00000022918	DDX56	87	67.010	Oryctolagus_cuniculus
ENSAOCG00000015447	-	87	88.296	ENSORLG00000001434	ddx56	87	88.296	Oryzias_latipes
ENSAOCG00000015447	-	87	87.885	ENSORLG00020015718	ddx56	84	87.885	Oryzias_latipes_hni
ENSAOCG00000015447	-	87	88.296	ENSORLG00015003004	ddx56	83	88.296	Oryzias_latipes_hsok
ENSAOCG00000015447	-	87	88.090	ENSOMEG00000022072	ddx56	87	88.090	Oryzias_melastigma
ENSAOCG00000015447	-	87	66.324	ENSOGAG00000009981	DDX56	88	66.735	Otolemur_garnettii
ENSAOCG00000015447	-	87	67.351	ENSOARG00000015240	DDX56	88	67.351	Ovis_aries
ENSAOCG00000015447	-	87	63.984	ENSPPAG00000029147	DDX56	88	63.984	Pan_paniscus
ENSAOCG00000015447	-	87	54.490	ENSPPAG00000031263	-	87	54.082	Pan_paniscus
ENSAOCG00000015447	-	90	63.813	ENSPPRG00000014594	DDX56	88	65.914	Panthera_pardus
ENSAOCG00000015447	-	77	61.731	ENSPTIG00000019500	DDX56	79	64.078	Panthera_tigris_altaica
ENSAOCG00000015447	-	87	67.008	ENSPTRG00000019147	DDX56	88	67.008	Pan_troglodytes
ENSAOCG00000015447	-	82	53.247	ENSPTRG00000052765	-	87	54.762	Pan_troglodytes
ENSAOCG00000015447	-	87	66.598	ENSPANG00000002446	DDX56	88	66.598	Papio_anubis
ENSAOCG00000015447	-	87	82.546	ENSPKIG00000018998	ddx56	86	82.546	Paramormyrops_kingsleyae
ENSAOCG00000015447	-	87	87.885	ENSPMGG00000017421	ddx56	90	87.885	Periophthalmus_magnuspinnatus
ENSAOCG00000015447	-	87	68.712	ENSPCIG00000009336	DDX56	87	68.712	Phascolarctos_cinereus
ENSAOCG00000015447	-	87	87.885	ENSPFOG00000018658	ddx56	87	88.525	Poecilia_formosa
ENSAOCG00000015447	-	87	88.090	ENSPLAG00000019208	ddx56	91	87.474	Poecilia_latipinna
ENSAOCG00000015447	-	87	87.885	ENSPMEG00000001775	ddx56	91	88.115	Poecilia_mexicana
ENSAOCG00000015447	-	87	88.090	ENSPREG00000015142	ddx56	87	88.115	Poecilia_reticulata
ENSAOCG00000015447	-	87	67.008	ENSPPYG00000017591	DDX56	88	67.008	Pongo_abelii
ENSAOCG00000015447	-	90	63.618	ENSPCAG00000011499	DDX56	88	66.879	Procavia_capensis
ENSAOCG00000015447	-	87	67.351	ENSPCOG00000024864	DDX56	88	67.351	Propithecus_coquereli
ENSAOCG00000015447	-	76	68.246	ENSPVAG00000000791	DDX56	76	68.246	Pteropus_vampyrus
ENSAOCG00000015447	-	87	88.090	ENSPNYG00000019212	ddx56	87	88.090	Pundamilia_nyererei
ENSAOCG00000015447	-	87	82.822	ENSPNAG00000025446	ddx56	91	82.582	Pygocentrus_nattereri
ENSAOCG00000015447	-	87	66.324	ENSRNOG00000004670	Ddx56	88	65.708	Rattus_norvegicus
ENSAOCG00000015447	-	87	66.803	ENSRBIG00000030140	DDX56	88	66.803	Rhinopithecus_bieti
ENSAOCG00000015447	-	87	66.598	ENSRROG00000044428	DDX56	88	66.598	Rhinopithecus_roxellana
ENSAOCG00000015447	-	86	44.701	YLR276C	-	87	45.857	Saccharomyces_cerevisiae
ENSAOCG00000015447	-	87	66.598	ENSSBOG00000034339	DDX56	88	66.598	Saimiri_boliviensis_boliviensis
ENSAOCG00000015447	-	74	68.357	ENSSHAG00000016615	DDX56	85	68.599	Sarcophilus_harrisii
ENSAOCG00000015447	-	94	78.095	ENSSFOG00015012795	ddx56	86	81.930	Scleropages_formosus
ENSAOCG00000015447	-	87	91.581	ENSSMAG00000011280	ddx56	90	91.581	Scophthalmus_maximus
ENSAOCG00000015447	-	87	92.608	ENSSDUG00000023597	ddx56	87	92.608	Seriola_dumerili
ENSAOCG00000015447	-	87	92.402	ENSSLDG00000018369	ddx56	87	92.402	Seriola_lalandi_dorsalis
ENSAOCG00000015447	-	65	77.586	ENSSARG00000014363	DDX56	67	72.464	Sorex_araneus
ENSAOCG00000015447	-	87	74.898	ENSSPUG00000000784	DDX56	85	74.898	Sphenodon_punctatus
ENSAOCG00000015447	-	87	95.902	ENSSPAG00000009392	ddx56	90	95.902	Stegastes_partitus
ENSAOCG00000015447	-	87	65.503	ENSSSCG00000016745	DDX56	88	66.324	Sus_scrofa
ENSAOCG00000015447	-	87	88.776	ENSTRUG00000018623	ddx56	87	89.592	Takifugu_rubripes
ENSAOCG00000015447	-	87	88.618	ENSTNIG00000013593	ddx56	87	88.844	Tetraodon_nigroviridis
ENSAOCG00000015447	-	87	66.598	ENSTBEG00000007119	DDX56	88	66.393	Tupaia_belangeri
ENSAOCG00000015447	-	74	66.019	ENSTTRG00000010552	DDX56	86	65.777	Tursiops_truncatus
ENSAOCG00000015447	-	87	66.530	ENSUAMG00000014194	DDX56	88	66.530	Ursus_americanus
ENSAOCG00000015447	-	87	66.530	ENSUMAG00000009666	DDX56	88	66.530	Ursus_maritimus
ENSAOCG00000015447	-	87	65.503	ENSVVUG00000011905	DDX56	88	65.708	Vulpes_vulpes
ENSAOCG00000015447	-	87	75.000	ENSXETG00000019000	ddx56	87	75.615	Xenopus_tropicalis
ENSAOCG00000015447	-	87	87.064	ENSXCOG00000017413	ddx56	90	86.858	Xiphophorus_couchianus
ENSAOCG00000015447	-	87	88.320	ENSXMAG00000018749	ddx56	90	87.910	Xiphophorus_maculatus