EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAOCG00000015578 (Gene tree)
Gene ID: 111581044
Gene Symbol: smarca5
Alias: SWI/SNF related|matrix associated|actin dependent regulator of chromatin A5|chunp6878|fb26d12|fb49g04|im:7146484|wu:fb26d12|wu:fb49g04|zgc:158434
Full Name: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Plus strand
Length: 12903 bases
Position: chrNXFZ01003660.1:370585-383487
Accession: 111581044
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000026965	ResIII	PF04851.15	8.6e-11	1	1
ENSAOCP00000026965	DEAD	PF00270.29	6.8e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000018610	-	3739	XM_023289029	ENSAOCP00000026965	1036 (aa)	XP_023144797	UPI000B9077CC

Gene Model

Click here to download ENSAOCG00000015578's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000015578's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAOCG00000015578	smarca5	50	41.275	ENSAOCG00000006348	hells	73	41.275
ENSAOCG00000015578	smarca5	53	42.545	ENSAOCG00000014510	chd1l	54	42.545

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000015578	smarca5	95	82.762	ENSG00000102038	SMARCA1	92	83.709	Homo_sapiens
ENSAOCG00000015578	smarca5	100	100.000	ENSAPOG00000016035	smarca5	100	100.000	Acanthochromis_polyacanthus
ENSAOCG00000015578	smarca5	95	81.737	ENSAMEG00000015218	SMARCA1	92	82.692	Ailuropoda_melanoleuca
ENSAOCG00000015578	smarca5	87	98.446	ENSACIG00000016982	smarca5	100	98.446	Amphilophus_citrinellus
ENSAOCG00000015578	smarca5	100	100.000	ENSAPEG00000011117	smarca5	100	100.000	Amphiprion_percula
ENSAOCG00000015578	smarca5	100	98.069	ENSATEG00000012894	smarca5	100	98.069	Anabas_testudineus
ENSAOCG00000015578	smarca5	94	84.426	ENSAPLG00000013149	SMARCA1	99	84.426	Anas_platyrhynchos
ENSAOCG00000015578	smarca5	98	82.255	ENSACAG00000011376	SMARCA1	93	84.939	Anolis_carolinensis
ENSAOCG00000015578	smarca5	95	78.024	ENSANAG00000023098	SMARCA1	92	78.893	Aotus_nancymaae
ENSAOCG00000015578	smarca5	100	97.683	ENSACLG00000025356	smarca5	100	97.683	Astatotilapia_calliptera
ENSAOCG00000015578	smarca5	90	84.425	ENSAMXG00000011227	smarca1	99	85.645	Astyanax_mexicanus
ENSAOCG00000015578	smarca5	98	92.969	ENSAMXG00000005709	smarca5	97	93.855	Astyanax_mexicanus
ENSAOCG00000015578	smarca5	95	82.977	ENSBTAG00000002292	SMARCA1	90	83.667	Bos_taurus
ENSAOCG00000015578	smarca5	96	63.142	WBGene00002169	isw-1	95	64.087	Caenorhabditis_elegans
ENSAOCG00000015578	smarca5	95	82.863	ENSCJAG00000002868	SMARCA1	92	83.709	Callithrix_jacchus
ENSAOCG00000015578	smarca5	95	73.386	ENSCAFG00000018673	SMARCA1	99	75.410	Canis_familiaris
ENSAOCG00000015578	smarca5	95	82.828	ENSCAFG00020001751	SMARCA1	92	83.811	Canis_lupus_dingo
ENSAOCG00000015578	smarca5	95	82.675	ENSCHIG00000009837	SMARCA1	92	83.402	Capra_hircus
ENSAOCG00000015578	smarca5	98	80.019	ENSTSYG00000004240	SMARCA1	94	84.697	Carlito_syrichta
ENSAOCG00000015578	smarca5	95	81.426	ENSCPOG00000013601	SMARCA1	93	82.383	Cavia_porcellus
ENSAOCG00000015578	smarca5	95	80.141	ENSCCAG00000030817	SMARCA1	92	81.045	Cebus_capucinus
ENSAOCG00000015578	smarca5	93	83.884	ENSCATG00000015921	SMARCA1	90	84.952	Cercocebus_atys
ENSAOCG00000015578	smarca5	95	82.020	ENSCLAG00000002171	SMARCA1	92	82.992	Chinchilla_lanigera
ENSAOCG00000015578	smarca5	95	82.762	ENSCSAG00000008460	SMARCA1	92	83.709	Chlorocebus_sabaeus
ENSAOCG00000015578	smarca5	95	83.992	ENSCPBG00000001146	SMARCA1	92	84.734	Chrysemys_picta_bellii
ENSAOCG00000015578	smarca5	96	74.155	ENSCING00000004110	swi/snf	99	74.155	Ciona_intestinalis
ENSAOCG00000015578	smarca5	96	73.340	ENSCSAVG00000004620	-	99	76.286	Ciona_savignyi
ENSAOCG00000015578	smarca5	95	82.863	ENSCANG00000007183	SMARCA1	92	83.811	Colobus_angolensis_palliatus
ENSAOCG00000015578	smarca5	95	81.837	ENSCGRG00001010776	Smarca1	92	82.684	Cricetulus_griseus_chok1gshd
ENSAOCG00000015578	smarca5	95	81.256	ENSCGRG00000015301	Smarca1	94	83.227	Cricetulus_griseus_crigri
ENSAOCG00000015578	smarca5	100	97.394	ENSCSEG00000000328	smarca5	100	97.394	Cynoglossus_semilaevis
ENSAOCG00000015578	smarca5	100	96.815	ENSCVAG00000008668	smarca5	100	96.815	Cyprinodon_variegatus
ENSAOCG00000015578	smarca5	94	82.915	ENSDARG00000012776	smarca1	96	82.915	Danio_rerio
ENSAOCG00000015578	smarca5	100	92.100	ENSDARG00000052348	smarca5	100	91.506	Danio_rerio
ENSAOCG00000015578	smarca5	93	83.540	ENSDNOG00000004315	SMARCA1	90	84.632	Dasypus_novemcinctus
ENSAOCG00000015578	smarca5	96	81.910	ENSDORG00000009270	Smarca1	90	84.845	Dipodomys_ordii
ENSAOCG00000015578	smarca5	94	74.924	FBgn0011604	Iswi	97	74.400	Drosophila_melanogaster
ENSAOCG00000015578	smarca5	78	81.818	ENSETEG00000017426	SMARCA1	83	81.818	Echinops_telfairi
ENSAOCG00000015578	smarca5	97	80.834	ENSEBUG00000001239	smarca5	99	80.834	Eptatretus_burgeri
ENSAOCG00000015578	smarca5	95	78.068	ENSEASG00005008218	SMARCA1	99	79.735	Equus_asinus_asinus
ENSAOCG00000015578	smarca5	95	82.727	ENSECAG00000012106	SMARCA1	92	83.709	Equus_caballus
ENSAOCG00000015578	smarca5	76	83.775	ENSEEUG00000014927	SMARCA1	80	83.775	Erinaceus_europaeus
ENSAOCG00000015578	smarca5	94	84.292	ENSELUG00000010515	smarca1	95	85.377	Esox_lucius
ENSAOCG00000015578	smarca5	95	82.727	ENSFCAG00000018496	SMARCA1	92	83.709	Felis_catus
ENSAOCG00000015578	smarca5	88	85.339	ENSFALG00000000209	SMARCA1	98	85.339	Ficedula_albicollis
ENSAOCG00000015578	smarca5	93	82.209	ENSFDAG00000009818	SMARCA1	93	83.246	Fukomys_damarensis
ENSAOCG00000015578	smarca5	100	95.320	ENSFHEG00000007687	smarca5	100	94.365	Fundulus_heteroclitus
ENSAOCG00000015578	smarca5	96	81.791	ENSGALG00000008431	SMARCA1	94	85.340	Gallus_gallus
ENSAOCG00000015578	smarca5	100	97.297	ENSGAFG00000017731	smarca5	100	97.297	Gambusia_affinis
ENSAOCG00000015578	smarca5	94	84.671	ENSGAGG00000023575	SMARCA1	99	84.671	Gopherus_agassizii
ENSAOCG00000015578	smarca5	70	96.000	ENSGGOG00000012841	-	91	80.118	Gorilla_gorilla
ENSAOCG00000015578	smarca5	95	81.818	ENSHGLG00000003080	SMARCA1	92	82.787	Heterocephalus_glaber_female
ENSAOCG00000015578	smarca5	95	81.325	ENSHGLG00100001102	SMARCA1	98	82.281	Heterocephalus_glaber_male
ENSAOCG00000015578	smarca5	100	97.782	ENSHCOG00000005458	smarca5	100	97.782	Hippocampus_comes
ENSAOCG00000015578	smarca5	100	91.128	ENSIPUG00000005229	SMARCA5	96	95.277	Ictalurus_punctatus
ENSAOCG00000015578	smarca5	96	82.224	ENSIPUG00000016905	Smarca1	99	84.189	Ictalurus_punctatus
ENSAOCG00000015578	smarca5	95	82.661	ENSSTOG00000014524	SMARCA1	97	81.700	Ictidomys_tridecemlineatus
ENSAOCG00000015578	smarca5	95	81.307	ENSJJAG00000002593	Smarca1	92	82.263	Jaculus_jaculus
ENSAOCG00000015578	smarca5	100	97.104	ENSKMAG00000003777	smarca5	100	97.104	Kryptolebias_marmoratus
ENSAOCG00000015578	smarca5	94	96.626	ENSLBEG00000013295	SMARCA1	100	98.354	Labrus_bergylta
ENSAOCG00000015578	smarca5	100	96.718	ENSLBEG00000018112	smarca5	100	96.718	Labrus_bergylta
ENSAOCG00000015578	smarca5	97	82.475	ENSLACG00000016697	SMARCA1	95	85.258	Latimeria_chalumnae
ENSAOCG00000015578	smarca5	94	85.612	ENSLOCG00000014591	smarca1	95	85.949	Lepisosteus_oculatus
ENSAOCG00000015578	smarca5	95	81.526	ENSLAFG00000000896	SMARCA1	98	82.485	Loxodonta_africana
ENSAOCG00000015578	smarca5	95	82.762	ENSMFAG00000002117	SMARCA1	93	84.771	Macaca_fascicularis
ENSAOCG00000015578	smarca5	93	83.884	ENSMMUG00000008818	SMARCA1	97	84.829	Macaca_mulatta
ENSAOCG00000015578	smarca5	93	83.884	ENSMNEG00000041768	SMARCA1	93	84.771	Macaca_nemestrina
ENSAOCG00000015578	smarca5	95	82.762	ENSMLEG00000043198	SMARCA1	92	83.709	Mandrillus_leucophaeus
ENSAOCG00000015578	smarca5	100	97.979	ENSMAMG00000014294	smarca5	100	97.979	Mastacembelus_armatus
ENSAOCG00000015578	smarca5	100	97.683	ENSMZEG00005009369	smarca5	100	97.683	Maylandia_zebra
ENSAOCG00000015578	smarca5	94	83.300	ENSMGAG00000007042	SMARCA1	97	83.300	Meleagris_gallopavo
ENSAOCG00000015578	smarca5	93	82.080	ENSMAUG00000008133	Smarca1	90	83.121	Mesocricetus_auratus
ENSAOCG00000015578	smarca5	95	83.030	ENSMICG00000015768	SMARCA1	92	84.016	Microcebus_murinus
ENSAOCG00000015578	smarca5	95	81.005	ENSMOCG00000009464	Smarca1	92	81.957	Microtus_ochrogaster
ENSAOCG00000015578	smarca5	96	97.384	ENSMMOG00000005547	smarca5	100	97.384	Mola_mola
ENSAOCG00000015578	smarca5	95	83.792	ENSMODG00000013187	-	94	84.205	Monodelphis_domestica
ENSAOCG00000015578	smarca5	100	97.782	ENSMALG00000002081	smarca5	100	97.782	Monopterus_albus
ENSAOCG00000015578	smarca5	95	81.206	MGP_CAROLIEiJ_G0033034	Smarca1	92	82.263	Mus_caroli
ENSAOCG00000015578	smarca5	95	81.307	ENSMUSG00000031099	Smarca1	92	82.263	Mus_musculus
ENSAOCG00000015578	smarca5	95	81.478	MGP_PahariEiJ_G0031579	Smarca1	92	82.546	Mus_pahari
ENSAOCG00000015578	smarca5	95	81.307	MGP_SPRETEiJ_G0034192	Smarca1	92	82.263	Mus_spretus
ENSAOCG00000015578	smarca5	95	81.836	ENSMPUG00000017423	SMARCA1	87	82.794	Mustela_putorius_furo
ENSAOCG00000015578	smarca5	95	80.578	ENSMLUG00000029614	SMARCA1	92	81.212	Myotis_lucifugus
ENSAOCG00000015578	smarca5	93	82.595	ENSNGAG00000006492	Smarca1	90	83.652	Nannospalax_galili
ENSAOCG00000015578	smarca5	96	98.390	ENSNBRG00000004463	smarca5	99	98.390	Neolamprologus_brichardi
ENSAOCG00000015578	smarca5	95	81.076	ENSNLEG00000015179	SMARCA1	94	84.043	Nomascus_leucogenys
ENSAOCG00000015578	smarca5	89	75.936	ENSMEUG00000008819	SMARCA1	97	76.319	Notamacropus_eugenii
ENSAOCG00000015578	smarca5	96	80.437	ENSODEG00000012163	SMARCA1	90	83.246	Octodon_degus
ENSAOCG00000015578	smarca5	100	97.780	ENSONIG00000009993	smarca5	100	97.780	Oreochromis_niloticus
ENSAOCG00000015578	smarca5	94	84.979	ENSOANG00000002862	SMARCA1	99	84.979	Ornithorhynchus_anatinus
ENSAOCG00000015578	smarca5	95	83.080	ENSOCUG00000001047	SMARCA1	92	83.811	Oryctolagus_cuniculus
ENSAOCG00000015578	smarca5	100	96.923	ENSORLG00000021998	smarca5	100	96.923	Oryzias_latipes
ENSAOCG00000015578	smarca5	100	97.016	ENSORLG00020017679	smarca5	100	97.016	Oryzias_latipes_hni
ENSAOCG00000015578	smarca5	100	97.303	ENSORLG00015017210	smarca5	100	97.303	Oryzias_latipes_hsok
ENSAOCG00000015578	smarca5	100	97.300	ENSOMEG00000000086	smarca5	100	97.300	Oryzias_melastigma
ENSAOCG00000015578	smarca5	93	83.265	ENSOGAG00000004399	SMARCA1	90	84.089	Otolemur_garnettii
ENSAOCG00000015578	smarca5	94	83.402	ENSOARG00000014638	SMARCA1	99	83.402	Ovis_aries
ENSAOCG00000015578	smarca5	95	82.762	ENSPPAG00000034647	SMARCA1	92	83.709	Pan_paniscus
ENSAOCG00000015578	smarca5	95	82.828	ENSPPRG00000008929	SMARCA1	92	83.811	Panthera_pardus
ENSAOCG00000015578	smarca5	95	81.033	ENSPTIG00000000915	SMARCA1	96	81.974	Panthera_tigris_altaica
ENSAOCG00000015578	smarca5	95	82.762	ENSPTRG00000049876	SMARCA1	90	84.952	Pan_troglodytes
ENSAOCG00000015578	smarca5	95	82.762	ENSPANG00000003871	SMARCA1	92	83.709	Papio_anubis
ENSAOCG00000015578	smarca5	95	81.790	ENSPKIG00000013411	smarca1	96	83.912	Paramormyrops_kingsleyae
ENSAOCG00000015578	smarca5	94	84.671	ENSPSIG00000010101	SMARCA1	99	84.671	Pelodiscus_sinensis
ENSAOCG00000015578	smarca5	93	82.389	ENSPEMG00000017503	Smarca1	90	83.439	Peromyscus_maniculatus_bairdii
ENSAOCG00000015578	smarca5	94	84.216	ENSPCIG00000015460	SMARCA1	96	84.631	Phascolarctos_cinereus
ENSAOCG00000015578	smarca5	100	97.394	ENSPFOG00000007649	smarca5	100	97.394	Poecilia_formosa
ENSAOCG00000015578	smarca5	100	97.394	ENSPLAG00000003363	smarca5	100	97.394	Poecilia_latipinna
ENSAOCG00000015578	smarca5	100	97.490	ENSPMEG00000019849	smarca5	100	97.490	Poecilia_mexicana
ENSAOCG00000015578	smarca5	100	97.394	ENSPREG00000023250	smarca5	100	97.394	Poecilia_reticulata
ENSAOCG00000015578	smarca5	95	79.940	ENSPPYG00000020703	SMARCA1	92	80.840	Pongo_abelii
ENSAOCG00000015578	smarca5	75	78.125	ENSPCOG00000020722	SMARCA1	93	80.415	Propithecus_coquereli
ENSAOCG00000015578	smarca5	87	83.484	ENSPVAG00000003805	SMARCA1	84	83.574	Pteropus_vampyrus
ENSAOCG00000015578	smarca5	58	98.417	ENSPNYG00000012299	smarca5	92	98.417	Pundamilia_nyererei
ENSAOCG00000015578	smarca5	95	81.515	ENSRNOG00000003762	Smarca1	92	82.480	Rattus_norvegicus
ENSAOCG00000015578	smarca5	95	82.863	ENSRROG00000034167	SMARCA1	92	83.811	Rhinopithecus_roxellana
ENSAOCG00000015578	smarca5	94	83.607	ENSSBOG00000020641	SMARCA1	99	83.607	Saimiri_boliviensis_boliviensis
ENSAOCG00000015578	smarca5	94	79.733	ENSSHAG00000013518	SMARCA1	99	79.733	Sarcophilus_harrisii
ENSAOCG00000015578	smarca5	94	93.911	ENSSFOG00015016794	smarca5	100	93.814	Scleropages_formosus
ENSAOCG00000015578	smarca5	97	82.330	ENSSFOG00015009043	smarca1	95	85.010	Scleropages_formosus
ENSAOCG00000015578	smarca5	100	96.724	ENSSMAG00000004801	smarca5	100	96.724	Scophthalmus_maximus
ENSAOCG00000015578	smarca5	100	97.973	ENSSDUG00000020690	smarca5	100	97.973	Seriola_dumerili
ENSAOCG00000015578	smarca5	100	97.973	ENSSLDG00000025190	smarca5	100	97.973	Seriola_lalandi_dorsalis
ENSAOCG00000015578	smarca5	78	83.986	ENSSARG00000000842	SMARCA1	81	83.986	Sorex_araneus
ENSAOCG00000015578	smarca5	96	82.932	ENSSPUG00000000590	SMARCA1	92	85.445	Sphenodon_punctatus
ENSAOCG00000015578	smarca5	100	99.421	ENSSPAG00000002894	smarca5	100	99.421	Stegastes_partitus
ENSAOCG00000015578	smarca5	93	83.644	ENSSSCG00000012649	SMARCA1	95	83.214	Sus_scrofa
ENSAOCG00000015578	smarca5	94	83.707	ENSTGUG00000003899	-	99	84.119	Taeniopygia_guttata
ENSAOCG00000015578	smarca5	100	96.622	ENSTRUG00000014094	smarca5	100	96.139	Takifugu_rubripes
ENSAOCG00000015578	smarca5	98	95.870	ENSTNIG00000017717	smarca5	97	95.870	Tetraodon_nigroviridis
ENSAOCG00000015578	smarca5	86	82.594	ENSTBEG00000014973	SMARCA1	89	82.638	Tupaia_belangeri
ENSAOCG00000015578	smarca5	92	80.498	ENSTTRG00000006168	SMARCA1	96	80.400	Tursiops_truncatus
ENSAOCG00000015578	smarca5	95	82.644	ENSUAMG00000020201	SMARCA1	92	83.504	Ursus_americanus
ENSAOCG00000015578	smarca5	97	77.932	ENSUMAG00000004073	SMARCA1	95	85.360	Ursus_maritimus
ENSAOCG00000015578	smarca5	73	86.842	ENSVPAG00000010492	-	77	87.197	Vicugna_pacos
ENSAOCG00000015578	smarca5	95	82.828	ENSVVUG00000008878	SMARCA1	98	85.059	Vulpes_vulpes
ENSAOCG00000015578	smarca5	95	83.927	ENSXETG00000001526	smarca1	97	84.671	Xenopus_tropicalis
ENSAOCG00000015578	smarca5	97	97.423	ENSXCOG00000011170	smarca5	100	97.423	Xiphophorus_couchianus
ENSAOCG00000015578	smarca5	100	97.201	ENSXMAG00000009678	smarca5	100	97.201	Xiphophorus_maculatus