EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAOCG00000015607 (Gene tree)
Gene ID: -
Gene Symbol: LSM10 (1 of many)
Alias: -
Full Name: LSM10%2C U7 small nuclear RNA associated
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Plus strand
Length: 4736 bases
Position: chrNXFZ01002328.1:13712-18447
Accession: 17562
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000027008	LSM	PF01423.22	1e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000018684	LSM10 (1 of many)-201	390	-	ENSAOCP00000027008	129 (aa)	-	-

Gene Model

Click here to download ENSAOCG00000015607's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000015607's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAOCG00000015607	LSM10	84	94.495	ENSAOCG00000015618	LSM10	90	94.495
ENSAOCG00000015607	LSM10	57	31.081	ENSAOCG00000007406	snrpd1	63	30.667
ENSAOCG00000015607	LSM10	54	32.877	ENSAOCG00000006949	si:ch73-14h10.2	60	32.877
ENSAOCG00000015607	LSM10	57	34.667	ENSAOCG00000006414	lsm4	52	33.766
ENSAOCG00000015607	LSM10	84	94.495	ENSAOCG00000014654	-	90	94.495

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000015607	LSM10	86	65.766	ENSG00000181817	LSM10	90	65.766	Homo_sapiens
ENSAOCG00000015607	LSM10	91	64.103	ENSAMEG00000019854	LSM10	95	64.103	Ailuropoda_melanoleuca
ENSAOCG00000015607	LSM10	86	86.486	ENSACIG00000015420	oscp1a	72	86.486	Amphilophus_citrinellus
ENSAOCG00000015607	LSM10	84	94.495	ENSAPEG00000021845	-	90	94.495	Amphiprion_percula
ENSAOCG00000015607	LSM10	100	100.000	ENSAPEG00000021851	LSM10	100	100.000	Amphiprion_percula
ENSAOCG00000015607	LSM10	84	82.407	ENSATEG00000006310	oscp1a	80	82.407	Anabas_testudineus
ENSAOCG00000015607	LSM10	88	57.895	ENSACAG00000001231	LSM10	93	57.895	Anolis_carolinensis
ENSAOCG00000015607	LSM10	86	64.865	ENSANAG00000031489	-	91	64.865	Aotus_nancymaae
ENSAOCG00000015607	LSM10	86	65.766	ENSANAG00000018759	-	90	65.766	Aotus_nancymaae
ENSAOCG00000015607	LSM10	84	84.259	ENSACLG00000004728	oscp1a	86	84.259	Astatotilapia_calliptera
ENSAOCG00000015607	LSM10	81	75.962	ENSAMXG00000025301	oscp1a	87	75.962	Astyanax_mexicanus
ENSAOCG00000015607	LSM10	91	62.393	ENSBTAG00000024096	LSM10	96	62.393	Bos_taurus
ENSAOCG00000015607	LSM10	86	66.667	ENSCJAG00000044880	LSM10	90	66.667	Callithrix_jacchus
ENSAOCG00000015607	LSM10	86	66.667	ENSCAFG00000003382	LSM10	90	66.667	Canis_familiaris
ENSAOCG00000015607	LSM10	86	66.667	ENSCAFG00020008920	LSM10	90	66.667	Canis_lupus_dingo
ENSAOCG00000015607	LSM10	91	62.393	ENSCHIG00000009398	LSM10	96	62.393	Capra_hircus
ENSAOCG00000015607	LSM10	86	65.766	ENSCAPG00000012567	LSM10	90	65.766	Cavia_aperea
ENSAOCG00000015607	LSM10	86	65.766	ENSCPOG00000039302	LSM10	90	65.766	Cavia_porcellus
ENSAOCG00000015607	LSM10	86	63.964	ENSCCAG00000008378	-	90	63.964	Cebus_capucinus
ENSAOCG00000015607	LSM10	86	65.766	ENSCCAG00000018913	-	90	65.766	Cebus_capucinus
ENSAOCG00000015607	LSM10	86	65.766	ENSCATG00000006589	LSM10	90	65.766	Cercocebus_atys
ENSAOCG00000015607	LSM10	86	65.766	ENSCLAG00000008633	LSM10	90	65.766	Chinchilla_lanigera
ENSAOCG00000015607	LSM10	86	65.766	ENSCSAG00000000134	LSM10	90	65.766	Chlorocebus_sabaeus
ENSAOCG00000015607	LSM10	86	64.865	ENSCHOG00000008615	LSM10	89	64.865	Choloepus_hoffmanni
ENSAOCG00000015607	LSM10	79	34.314	ENSCSAVG00000001896	-	87	34.314	Ciona_savignyi
ENSAOCG00000015607	LSM10	86	65.766	ENSCANG00000019928	LSM10	90	65.766	Colobus_angolensis_palliatus
ENSAOCG00000015607	LSM10	86	66.667	ENSCGRG00001004317	-	91	66.667	Cricetulus_griseus_chok1gshd
ENSAOCG00000015607	LSM10	83	61.468	ENSCGRG00001022673	-	88	61.468	Cricetulus_griseus_chok1gshd
ENSAOCG00000015607	LSM10	83	61.468	ENSCGRG00000015514	-	88	61.468	Cricetulus_griseus_crigri
ENSAOCG00000015607	LSM10	86	66.667	ENSCGRG00000014935	-	91	66.667	Cricetulus_griseus_crigri
ENSAOCG00000015607	LSM10	91	75.214	ENSCSEG00000010374	oscp1a	79	75.214	Cynoglossus_semilaevis
ENSAOCG00000015607	LSM10	85	83.636	ENSCVAG00000001536	oscp1a	85	83.636	Cyprinodon_variegatus
ENSAOCG00000015607	LSM10	62	73.750	ENSDARG00000109563	CABZ01074453.1	93	73.750	Danio_rerio
ENSAOCG00000015607	LSM10	84	73.394	ENSDARG00000101222	oscp1a	91	73.394	Danio_rerio
ENSAOCG00000015607	LSM10	86	66.667	ENSDNOG00000036662	LSM10	90	66.667	Dasypus_novemcinctus
ENSAOCG00000015607	LSM10	91	64.103	ENSDORG00000007579	Lsm10	95	64.103	Dipodomys_ordii
ENSAOCG00000015607	LSM10	86	66.667	ENSETEG00000005703	LSM10	90	66.667	Echinops_telfairi
ENSAOCG00000015607	LSM10	78	53.000	ENSEBUG00000001312	oscp1a	82	53.000	Eptatretus_burgeri
ENSAOCG00000015607	LSM10	86	66.667	ENSEASG00005012194	LSM10	90	66.667	Equus_asinus_asinus
ENSAOCG00000015607	LSM10	86	66.667	ENSECAG00000005071	LSM10	90	66.667	Equus_caballus
ENSAOCG00000015607	LSM10	86	67.568	ENSEEUG00000012032	LSM10	90	67.568	Erinaceus_europaeus
ENSAOCG00000015607	LSM10	91	73.504	ENSELUG00000007452	oscp1a	96	73.504	Esox_lucius
ENSAOCG00000015607	LSM10	79	68.627	ENSFALG00000000851	LSM10	83	68.627	Ficedula_albicollis
ENSAOCG00000015607	LSM10	86	66.667	ENSFDAG00000021056	LSM10	90	66.667	Fukomys_damarensis
ENSAOCG00000015607	LSM10	81	80.769	ENSFHEG00000001058	oscp1a	88	80.769	Fundulus_heteroclitus
ENSAOCG00000015607	LSM10	86	72.973	ENSGMOG00000019832	oscp1a	92	72.973	Gadus_morhua
ENSAOCG00000015607	LSM10	86	65.766	ENSGALG00000002127	LSM10	90	65.766	Gallus_gallus
ENSAOCG00000015607	LSM10	78	71.000	ENSGAFG00000016445	oscp1a	80	71.000	Gambusia_affinis
ENSAOCG00000015607	LSM10	84	85.185	ENSGACG00000002329	oscp1a	89	85.185	Gasterosteus_aculeatus
ENSAOCG00000015607	LSM10	91	61.017	ENSGAGG00000024848	LSM10	96	61.017	Gopherus_agassizii
ENSAOCG00000015607	LSM10	86	65.766	ENSGGOG00000003556	LSM10	90	65.766	Gorilla_gorilla
ENSAOCG00000015607	LSM10	84	85.185	ENSHBUG00000001722	oscp1a	86	85.185	Haplochromis_burtoni
ENSAOCG00000015607	LSM10	86	63.964	ENSHGLG00000011625	LSM10	90	63.964	Heterocephalus_glaber_female
ENSAOCG00000015607	LSM10	86	63.964	ENSHGLG00100001769	LSM10	90	63.964	Heterocephalus_glaber_male
ENSAOCG00000015607	LSM10	81	75.472	ENSIPUG00000005808	oscp1a	92	75.472	Ictalurus_punctatus
ENSAOCG00000015607	LSM10	91	64.103	ENSSTOG00000000606	LSM10	95	64.103	Ictidomys_tridecemlineatus
ENSAOCG00000015607	LSM10	86	80.180	ENSKMAG00000012143	oscp1a	92	80.180	Kryptolebias_marmoratus
ENSAOCG00000015607	LSM10	81	80.769	ENSLBEG00000017764	oscp1a	85	80.769	Labrus_bergylta
ENSAOCG00000015607	LSM10	89	62.609	ENSLACG00000015904	LSM10	88	62.609	Latimeria_chalumnae
ENSAOCG00000015607	LSM10	81	76.190	ENSLOCG00000018277	oscp1a	86	76.190	Lepisosteus_oculatus
ENSAOCG00000015607	LSM10	91	64.957	ENSLAFG00000009600	LSM10	95	64.957	Loxodonta_africana
ENSAOCG00000015607	LSM10	86	65.766	ENSMFAG00000009115	LSM10	90	65.766	Macaca_fascicularis
ENSAOCG00000015607	LSM10	86	65.766	ENSMMUG00000017338	LSM10	90	65.766	Macaca_mulatta
ENSAOCG00000015607	LSM10	86	65.766	ENSMNEG00000020023	LSM10	90	65.766	Macaca_nemestrina
ENSAOCG00000015607	LSM10	86	65.766	ENSMLEG00000025150	LSM10	90	65.766	Mandrillus_leucophaeus
ENSAOCG00000015607	LSM10	86	81.982	ENSMAMG00000004427	oscp1a	91	81.982	Mastacembelus_armatus
ENSAOCG00000015607	LSM10	84	84.259	ENSMZEG00005026307	oscp1a	86	84.259	Maylandia_zebra
ENSAOCG00000015607	LSM10	86	64.865	ENSMGAG00000015707	LSM10	90	64.865	Meleagris_gallopavo
ENSAOCG00000015607	LSM10	86	67.568	ENSMAUG00000016624	Lsm10	91	67.568	Mesocricetus_auratus
ENSAOCG00000015607	LSM10	86	66.667	ENSMOCG00000021943	Lsm10	91	66.667	Microtus_ochrogaster
ENSAOCG00000015607	LSM10	96	75.781	ENSMMOG00000013597	oscp1a	96	75.781	Mola_mola
ENSAOCG00000015607	LSM10	84	72.477	ENSMODG00000023328	LSM10	87	72.477	Monodelphis_domestica
ENSAOCG00000015607	LSM10	86	66.667	MGP_CAROLIEiJ_G0026467	Lsm10	98	69.231	Mus_caroli
ENSAOCG00000015607	LSM10	86	66.667	ENSMUSG00000050188	Lsm10	98	69.231	Mus_musculus
ENSAOCG00000015607	LSM10	86	66.667	MGP_PahariEiJ_G0028798	Lsm10	98	69.231	Mus_pahari
ENSAOCG00000015607	LSM10	86	66.667	MGP_SPRETEiJ_G0027446	Lsm10	98	69.231	Mus_spretus
ENSAOCG00000015607	LSM10	86	66.667	ENSMPUG00000018593	LSM10	90	66.667	Mustela_putorius_furo
ENSAOCG00000015607	LSM10	86	65.766	ENSMLUG00000023895	LSM10	90	65.766	Myotis_lucifugus
ENSAOCG00000015607	LSM10	91	63.248	ENSNGAG00000015011	Lsm10	95	63.248	Nannospalax_galili
ENSAOCG00000015607	LSM10	84	86.111	ENSNBRG00000014306	oscp1a	86	86.111	Neolamprologus_brichardi
ENSAOCG00000015607	LSM10	86	65.766	ENSNLEG00000033754	LSM10	90	65.766	Nomascus_leucogenys
ENSAOCG00000015607	LSM10	84	72.477	ENSMEUG00000006313	LSM10	87	72.477	Notamacropus_eugenii
ENSAOCG00000015607	LSM10	86	65.766	ENSOPRG00000001699	LSM10	90	65.766	Ochotona_princeps
ENSAOCG00000015607	LSM10	86	65.766	ENSODEG00000019161	LSM10	90	65.766	Octodon_degus
ENSAOCG00000015607	LSM10	86	83.784	ENSONIG00000020904	oscp1a	89	83.784	Oreochromis_niloticus
ENSAOCG00000015607	LSM10	84	68.519	ENSOANG00000002066	LSM10	86	68.519	Ornithorhynchus_anatinus
ENSAOCG00000015607	LSM10	86	63.964	ENSOCUG00000005333	LSM10	90	63.964	Oryctolagus_cuniculus
ENSAOCG00000015607	LSM10	87	79.464	ENSORLG00000009504	oscp1a	92	79.464	Oryzias_latipes
ENSAOCG00000015607	LSM10	87	79.464	ENSORLG00020016201	oscp1a	92	79.464	Oryzias_latipes_hni
ENSAOCG00000015607	LSM10	84	78.899	ENSORLG00015007794	oscp1a	92	78.899	Oryzias_latipes_hsok
ENSAOCG00000015607	LSM10	91	65.812	ENSOGAG00000002653	LSM10	95	65.812	Otolemur_garnettii
ENSAOCG00000015607	LSM10	91	62.393	ENSOARG00000009596	LSM10	96	62.393	Ovis_aries
ENSAOCG00000015607	LSM10	86	65.766	ENSPPAG00000023465	LSM10	90	65.766	Pan_paniscus
ENSAOCG00000015607	LSM10	86	66.667	ENSPPRG00000014619	LSM10	90	66.667	Panthera_pardus
ENSAOCG00000015607	LSM10	86	66.667	ENSPTIG00000004613	LSM10	90	66.667	Panthera_tigris_altaica
ENSAOCG00000015607	LSM10	86	65.766	ENSPTRG00000000539	LSM10	90	65.766	Pan_troglodytes
ENSAOCG00000015607	LSM10	86	65.766	ENSPANG00000023172	LSM10	90	65.766	Papio_anubis
ENSAOCG00000015607	LSM10	96	66.935	ENSPKIG00000003728	oscp1a	94	66.935	Paramormyrops_kingsleyae
ENSAOCG00000015607	LSM10	91	59.322	ENSPSIG00000000590	LSM10	96	59.322	Pelodiscus_sinensis
ENSAOCG00000015607	LSM10	59	69.737	ENSPMGG00000015718	oscp1a	99	69.737	Periophthalmus_magnuspinnatus
ENSAOCG00000015607	LSM10	76	73.469	ENSPCIG00000014865	LSM10	72	73.469	Phascolarctos_cinereus
ENSAOCG00000015607	LSM10	85	76.364	ENSPFOG00000020490	oscp1a	93	76.364	Poecilia_formosa
ENSAOCG00000015607	LSM10	85	76.364	ENSPLAG00000016537	oscp1a	84	76.364	Poecilia_latipinna
ENSAOCG00000015607	LSM10	81	76.923	ENSPMEG00000000174	oscp1a	90	76.923	Poecilia_mexicana
ENSAOCG00000015607	LSM10	85	75.455	ENSPREG00000009899	oscp1a	84	75.455	Poecilia_reticulata
ENSAOCG00000015607	LSM10	86	65.766	ENSPPYG00000001539	LSM10	90	65.766	Pongo_abelii
ENSAOCG00000015607	LSM10	86	66.667	ENSPCAG00000002520	LSM10	91	66.667	Procavia_capensis
ENSAOCG00000015607	LSM10	86	66.667	ENSPVAG00000008644	LSM10	90	66.667	Pteropus_vampyrus
ENSAOCG00000015607	LSM10	84	85.185	ENSPNYG00000003138	oscp1a	86	85.185	Pundamilia_nyererei
ENSAOCG00000015607	LSM10	79	78.431	ENSPNAG00000028829	oscp1a	85	78.431	Pygocentrus_nattereri
ENSAOCG00000015607	LSM10	86	65.766	ENSRNOG00000025716	Lsm10	91	65.766	Rattus_norvegicus
ENSAOCG00000015607	LSM10	86	65.766	ENSRBIG00000001561	LSM10	90	65.766	Rhinopithecus_bieti
ENSAOCG00000015607	LSM10	86	65.766	ENSRROG00000011414	LSM10	90	65.766	Rhinopithecus_roxellana
ENSAOCG00000015607	LSM10	86	65.766	ENSSBOG00000036413	-	90	65.766	Saimiri_boliviensis_boliviensis
ENSAOCG00000015607	LSM10	84	72.477	ENSSHAG00000018056	LSM10	87	72.477	Sarcophilus_harrisii
ENSAOCG00000015607	LSM10	84	74.074	ENSSFOG00015019954	lsm10	89	74.074	Scleropages_formosus
ENSAOCG00000015607	LSM10	84	84.259	ENSSMAG00000001297	oscp1a	92	84.259	Scophthalmus_maximus
ENSAOCG00000015607	LSM10	79	82.353	ENSSDUG00000007090	oscp1a	83	82.353	Seriola_dumerili
ENSAOCG00000015607	LSM10	79	83.333	ENSSLDG00000000800	oscp1a	84	83.333	Seriola_lalandi_dorsalis
ENSAOCG00000015607	LSM10	79	71.569	ENSSARG00000004211	LSM10	89	66.667	Sorex_araneus
ENSAOCG00000015607	LSM10	84	89.815	ENSSPAG00000009229	oscp1a	89	89.815	Stegastes_partitus
ENSAOCG00000015607	LSM10	79	70.588	ENSSSCG00000038916	LSM10	84	70.588	Sus_scrofa
ENSAOCG00000015607	LSM10	79	69.608	ENSTGUG00000001602	-	84	69.608	Taeniopygia_guttata
ENSAOCG00000015607	LSM10	79	68.627	ENSTGUG00000001600	-	84	68.627	Taeniopygia_guttata
ENSAOCG00000015607	LSM10	91	72.881	ENSTRUG00000010531	oscp1a	95	72.881	Takifugu_rubripes
ENSAOCG00000015607	LSM10	93	62.500	ENSTBEG00000016674	LSM10	98	62.500	Tupaia_belangeri
ENSAOCG00000015607	LSM10	86	66.667	ENSUAMG00000020265	LSM10	90	66.667	Ursus_americanus
ENSAOCG00000015607	LSM10	88	65.789	ENSUMAG00000001438	LSM10	53	65.789	Ursus_maritimus
ENSAOCG00000015607	LSM10	86	66.667	ENSVVUG00000023209	LSM10	90	66.667	Vulpes_vulpes
ENSAOCG00000015607	LSM10	79	65.686	ENSXETG00000027631	lsm10	84	65.686	Xenopus_tropicalis
ENSAOCG00000015607	LSM10	99	65.625	ENSXCOG00000018776	oscp1a	76	65.625	Xiphophorus_couchianus
ENSAOCG00000015607	LSM10	81	74.038	ENSXMAG00000019963	oscp1a	83	74.038	Xiphophorus_maculatus