EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAOCG00000015618 (Gene tree)
Gene ID: -
Gene Symbol: LSM10 (1 of many)
Alias: MGC15749
Full Name: LSM10%2C U7 small nuclear RNA associated
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Plus strand
Length: 4781 bases
Position: chrNXFZ01002328.1:4882-9662
Accession: 17562
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000011340	LSM	PF01423.22	8.6e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000018715	LSM10 (1 of many)-201	366	-	ENSAOCP00000011340	121 (aa)	-	-

Gene Model

Click here to download ENSAOCG00000015618's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000015618's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAOCG00000015618	LSM10	100	100.000	ENSAOCG00000014654	-	100	100.000
ENSAOCG00000015618	LSM10	58	32.877	ENSAOCG00000006949	si:ch73-14h10.2	60	32.877
ENSAOCG00000015618	LSM10	60	34.667	ENSAOCG00000006414	lsm4	52	33.766
ENSAOCG00000015618	LSM10	90	94.495	ENSAOCG00000015607	LSM10	84	94.495

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000015618	LSM10	98	67.797	ENSG00000181817	LSM10	96	67.797	Homo_sapiens
ENSAOCG00000015618	LSM10	98	69.492	ENSAMEG00000019854	LSM10	96	69.492	Ailuropoda_melanoleuca
ENSAOCG00000015618	LSM10	98	87.288	ENSACIG00000015420	oscp1a	78	87.288	Amphilophus_citrinellus
ENSAOCG00000015618	LSM10	90	94.495	ENSAPEG00000021851	LSM10	84	94.495	Amphiprion_percula
ENSAOCG00000015618	LSM10	100	100.000	ENSAPEG00000021845	-	100	100.000	Amphiprion_percula
ENSAOCG00000015618	LSM10	94	85.965	ENSATEG00000006310	oscp1a	84	85.965	Anabas_testudineus
ENSAOCG00000015618	LSM10	95	60.000	ENSACAG00000001231	LSM10	93	60.000	Anolis_carolinensis
ENSAOCG00000015618	LSM10	98	66.102	ENSANAG00000031489	-	97	66.102	Aotus_nancymaae
ENSAOCG00000015618	LSM10	98	67.797	ENSANAG00000018759	-	96	67.797	Aotus_nancymaae
ENSAOCG00000015618	LSM10	100	85.124	ENSACLG00000004728	oscp1a	98	85.124	Astatotilapia_calliptera
ENSAOCG00000015618	LSM10	100	73.554	ENSAMXG00000025301	oscp1a	100	73.554	Astyanax_mexicanus
ENSAOCG00000015618	LSM10	98	67.797	ENSBTAG00000024096	LSM10	97	67.797	Bos_taurus
ENSAOCG00000015618	LSM10	98	68.644	ENSCJAG00000044880	LSM10	96	68.644	Callithrix_jacchus
ENSAOCG00000015618	LSM10	98	69.492	ENSCAFG00000003382	LSM10	96	69.492	Canis_familiaris
ENSAOCG00000015618	LSM10	98	69.492	ENSCAFG00020008920	LSM10	96	69.492	Canis_lupus_dingo
ENSAOCG00000015618	LSM10	98	67.797	ENSCHIG00000009398	LSM10	97	67.797	Capra_hircus
ENSAOCG00000015618	LSM10	98	68.644	ENSCAPG00000012567	LSM10	96	68.644	Cavia_aperea
ENSAOCG00000015618	LSM10	98	68.644	ENSCPOG00000039302	LSM10	96	68.644	Cavia_porcellus
ENSAOCG00000015618	LSM10	98	65.254	ENSCCAG00000008378	-	96	65.254	Cebus_capucinus
ENSAOCG00000015618	LSM10	98	67.797	ENSCCAG00000018913	-	96	67.797	Cebus_capucinus
ENSAOCG00000015618	LSM10	95	68.696	ENSCATG00000006589	LSM10	93	68.696	Cercocebus_atys
ENSAOCG00000015618	LSM10	98	68.644	ENSCLAG00000008633	LSM10	96	68.644	Chinchilla_lanigera
ENSAOCG00000015618	LSM10	95	68.696	ENSCSAG00000000134	LSM10	93	68.696	Chlorocebus_sabaeus
ENSAOCG00000015618	LSM10	98	65.833	ENSCHOG00000008615	LSM10	96	65.833	Choloepus_hoffmanni
ENSAOCG00000015618	LSM10	83	33.000	ENSCSAVG00000001896	-	85	33.000	Ciona_savignyi
ENSAOCG00000015618	LSM10	95	68.696	ENSCANG00000019928	LSM10	93	68.696	Colobus_angolensis_palliatus
ENSAOCG00000015618	LSM10	94	62.931	ENSCGRG00001022673	-	93	62.931	Cricetulus_griseus_chok1gshd
ENSAOCG00000015618	LSM10	95	69.565	ENSCGRG00001004317	-	94	69.565	Cricetulus_griseus_chok1gshd
ENSAOCG00000015618	LSM10	94	62.931	ENSCGRG00000015514	-	93	62.931	Cricetulus_griseus_crigri
ENSAOCG00000015618	LSM10	95	69.565	ENSCGRG00000014935	-	94	69.565	Cricetulus_griseus_crigri
ENSAOCG00000015618	LSM10	99	83.333	ENSCSEG00000010374	oscp1a	81	83.333	Cynoglossus_semilaevis
ENSAOCG00000015618	LSM10	98	84.746	ENSCVAG00000001536	oscp1a	89	84.746	Cyprinodon_variegatus
ENSAOCG00000015618	LSM10	98	73.729	ENSDARG00000101222	oscp1a	98	73.729	Danio_rerio
ENSAOCG00000015618	LSM10	69	72.289	ENSDARG00000109563	CABZ01074453.1	96	72.289	Danio_rerio
ENSAOCG00000015618	LSM10	98	68.644	ENSDNOG00000036662	LSM10	96	68.644	Dasypus_novemcinctus
ENSAOCG00000015618	LSM10	95	70.435	ENSDORG00000007579	Lsm10	93	70.435	Dipodomys_ordii
ENSAOCG00000015618	LSM10	95	67.826	ENSETEG00000005703	LSM10	93	67.826	Echinops_telfairi
ENSAOCG00000015618	LSM10	94	50.000	ENSEBUG00000001312	oscp1a	93	50.000	Eptatretus_burgeri
ENSAOCG00000015618	LSM10	98	68.644	ENSEASG00005012194	LSM10	96	68.644	Equus_asinus_asinus
ENSAOCG00000015618	LSM10	98	68.644	ENSECAG00000005071	LSM10	96	68.644	Equus_caballus
ENSAOCG00000015618	LSM10	98	69.492	ENSEEUG00000012032	LSM10	96	69.492	Erinaceus_europaeus
ENSAOCG00000015618	LSM10	98	80.508	ENSELUG00000007452	oscp1a	97	80.508	Esox_lucius
ENSAOCG00000015618	LSM10	95	65.217	ENSFALG00000000851	LSM10	93	65.217	Ficedula_albicollis
ENSAOCG00000015618	LSM10	98	69.492	ENSFDAG00000021056	LSM10	96	69.492	Fukomys_damarensis
ENSAOCG00000015618	LSM10	93	80.702	ENSFHEG00000001058	oscp1a	98	80.702	Fundulus_heteroclitus
ENSAOCG00000015618	LSM10	95	69.565	ENSGMOG00000019832	oscp1a	97	69.565	Gadus_morhua
ENSAOCG00000015618	LSM10	97	66.667	ENSGALG00000002127	LSM10	95	66.667	Gallus_gallus
ENSAOCG00000015618	LSM10	88	72.897	ENSGAFG00000016445	oscp1a	87	72.897	Gambusia_affinis
ENSAOCG00000015618	LSM10	99	87.500	ENSGACG00000002329	oscp1a	98	87.500	Gasterosteus_aculeatus
ENSAOCG00000015618	LSM10	93	67.257	ENSGAGG00000024848	LSM10	92	67.257	Gopherus_agassizii
ENSAOCG00000015618	LSM10	98	67.797	ENSGGOG00000003556	LSM10	96	67.797	Gorilla_gorilla
ENSAOCG00000015618	LSM10	100	85.950	ENSHBUG00000001722	oscp1a	98	85.950	Haplochromis_burtoni
ENSAOCG00000015618	LSM10	98	66.949	ENSHGLG00000011625	LSM10	96	66.949	Heterocephalus_glaber_female
ENSAOCG00000015618	LSM10	98	66.949	ENSHGLG00100001769	LSM10	96	66.949	Heterocephalus_glaber_male
ENSAOCG00000015618	LSM10	89	72.222	ENSIPUG00000005808	oscp1a	94	72.222	Ictalurus_punctatus
ENSAOCG00000015618	LSM10	98	69.492	ENSSTOG00000000606	LSM10	96	69.492	Ictidomys_tridecemlineatus
ENSAOCG00000015618	LSM10	100	85.950	ENSKMAG00000012143	oscp1a	100	85.950	Kryptolebias_marmoratus
ENSAOCG00000015618	LSM10	93	84.071	ENSLBEG00000017764	oscp1a	93	84.071	Labrus_bergylta
ENSAOCG00000015618	LSM10	96	62.931	ENSLACG00000015904	LSM10	89	62.931	Latimeria_chalumnae
ENSAOCG00000015618	LSM10	99	74.167	ENSLOCG00000018277	oscp1a	98	74.167	Lepisosteus_oculatus
ENSAOCG00000015618	LSM10	95	69.565	ENSLAFG00000009600	LSM10	93	69.565	Loxodonta_africana
ENSAOCG00000015618	LSM10	95	68.696	ENSMFAG00000009115	LSM10	93	68.696	Macaca_fascicularis
ENSAOCG00000015618	LSM10	95	68.696	ENSMMUG00000017338	LSM10	93	68.696	Macaca_mulatta
ENSAOCG00000015618	LSM10	95	68.696	ENSMNEG00000020023	LSM10	93	68.696	Macaca_nemestrina
ENSAOCG00000015618	LSM10	95	68.696	ENSMLEG00000025150	LSM10	93	68.696	Mandrillus_leucophaeus
ENSAOCG00000015618	LSM10	99	85.000	ENSMAMG00000004427	oscp1a	98	85.000	Mastacembelus_armatus
ENSAOCG00000015618	LSM10	100	85.124	ENSMZEG00005026307	oscp1a	98	85.124	Maylandia_zebra
ENSAOCG00000015618	LSM10	97	65.812	ENSMGAG00000015707	LSM10	95	65.812	Meleagris_gallopavo
ENSAOCG00000015618	LSM10	95	70.435	ENSMAUG00000016624	Lsm10	94	70.435	Mesocricetus_auratus
ENSAOCG00000015618	LSM10	95	69.565	ENSMOCG00000021943	Lsm10	94	69.565	Microtus_ochrogaster
ENSAOCG00000015618	LSM10	94	87.719	ENSMMOG00000013597	oscp1a	85	87.719	Mola_mola
ENSAOCG00000015618	LSM10	98	72.034	ENSMODG00000023328	LSM10	96	72.034	Monodelphis_domestica
ENSAOCG00000015618	LSM10	54	84.615	ENSMALG00000012661	oscp1a	51	84.615	Monopterus_albus
ENSAOCG00000015618	LSM10	95	69.565	MGP_CAROLIEiJ_G0026467	Lsm10	95	71.591	Mus_caroli
ENSAOCG00000015618	LSM10	95	69.565	ENSMUSG00000050188	Lsm10	95	71.591	Mus_musculus
ENSAOCG00000015618	LSM10	95	69.565	MGP_PahariEiJ_G0028798	Lsm10	95	71.591	Mus_pahari
ENSAOCG00000015618	LSM10	95	69.565	MGP_SPRETEiJ_G0027446	Lsm10	95	71.591	Mus_spretus
ENSAOCG00000015618	LSM10	98	69.492	ENSMPUG00000018593	LSM10	96	69.492	Mustela_putorius_furo
ENSAOCG00000015618	LSM10	98	68.644	ENSMLUG00000023895	LSM10	96	68.644	Myotis_lucifugus
ENSAOCG00000015618	LSM10	95	68.696	ENSNGAG00000015011	Lsm10	93	68.696	Nannospalax_galili
ENSAOCG00000015618	LSM10	99	86.667	ENSNBRG00000014306	oscp1a	98	86.667	Neolamprologus_brichardi
ENSAOCG00000015618	LSM10	98	67.797	ENSNLEG00000033754	LSM10	96	67.797	Nomascus_leucogenys
ENSAOCG00000015618	LSM10	98	72.034	ENSMEUG00000006313	LSM10	96	72.034	Notamacropus_eugenii
ENSAOCG00000015618	LSM10	95	69.565	ENSOPRG00000001699	LSM10	93	69.565	Ochotona_princeps
ENSAOCG00000015618	LSM10	98	68.644	ENSODEG00000019161	LSM10	96	68.644	Octodon_degus
ENSAOCG00000015618	LSM10	99	86.667	ENSONIG00000020904	oscp1a	98	86.667	Oreochromis_niloticus
ENSAOCG00000015618	LSM10	99	67.769	ENSOANG00000002066	LSM10	98	67.769	Ornithorhynchus_anatinus
ENSAOCG00000015618	LSM10	98	66.949	ENSOCUG00000005333	LSM10	96	66.949	Oryctolagus_cuniculus
ENSAOCG00000015618	LSM10	100	80.992	ENSORLG00000009504	oscp1a	100	80.992	Oryzias_latipes
ENSAOCG00000015618	LSM10	100	80.992	ENSORLG00020016201	oscp1a	100	80.992	Oryzias_latipes_hni
ENSAOCG00000015618	LSM10	100	79.339	ENSORLG00015007794	oscp1a	100	79.339	Oryzias_latipes_hsok
ENSAOCG00000015618	LSM10	98	69.492	ENSOGAG00000002653	LSM10	96	69.492	Otolemur_garnettii
ENSAOCG00000015618	LSM10	98	67.797	ENSOARG00000009596	LSM10	97	67.797	Ovis_aries
ENSAOCG00000015618	LSM10	98	67.797	ENSPPAG00000023465	LSM10	96	67.797	Pan_paniscus
ENSAOCG00000015618	LSM10	98	68.644	ENSPPRG00000014619	LSM10	96	68.644	Panthera_pardus
ENSAOCG00000015618	LSM10	98	68.644	ENSPTIG00000004613	LSM10	96	68.644	Panthera_tigris_altaica
ENSAOCG00000015618	LSM10	98	67.797	ENSPTRG00000000539	LSM10	96	67.797	Pan_troglodytes
ENSAOCG00000015618	LSM10	95	68.696	ENSPANG00000023172	LSM10	93	68.696	Papio_anubis
ENSAOCG00000015618	LSM10	98	73.950	ENSPKIG00000003728	oscp1a	96	73.950	Paramormyrops_kingsleyae
ENSAOCG00000015618	LSM10	93	65.487	ENSPSIG00000000590	LSM10	92	65.487	Pelodiscus_sinensis
ENSAOCG00000015618	LSM10	63	71.053	ENSPMGG00000015718	oscp1a	99	71.053	Periophthalmus_magnuspinnatus
ENSAOCG00000015618	LSM10	83	72.277	ENSPCIG00000014865	LSM10	74	72.277	Phascolarctos_cinereus
ENSAOCG00000015618	LSM10	95	78.261	ENSPFOG00000020490	oscp1a	97	78.261	Poecilia_formosa
ENSAOCG00000015618	LSM10	98	77.119	ENSPLAG00000016537	oscp1a	90	77.119	Poecilia_latipinna
ENSAOCG00000015618	LSM10	93	77.876	ENSPMEG00000000174	oscp1a	98	77.876	Poecilia_mexicana
ENSAOCG00000015618	LSM10	98	77.119	ENSPREG00000009899	oscp1a	90	77.119	Poecilia_reticulata
ENSAOCG00000015618	LSM10	98	67.797	ENSPPYG00000001539	LSM10	96	67.797	Pongo_abelii
ENSAOCG00000015618	LSM10	97	68.376	ENSPCAG00000002520	LSM10	96	68.376	Procavia_capensis
ENSAOCG00000015618	LSM10	98	69.492	ENSPVAG00000008644	LSM10	96	69.492	Pteropus_vampyrus
ENSAOCG00000015618	LSM10	100	85.950	ENSPNYG00000003138	oscp1a	98	85.950	Pundamilia_nyererei
ENSAOCG00000015618	LSM10	100	75.207	ENSPNAG00000028829	oscp1a	100	75.207	Pygocentrus_nattereri
ENSAOCG00000015618	LSM10	95	68.696	ENSRNOG00000025716	Lsm10	94	68.696	Rattus_norvegicus
ENSAOCG00000015618	LSM10	95	68.696	ENSRBIG00000001561	LSM10	93	68.696	Rhinopithecus_bieti
ENSAOCG00000015618	LSM10	95	68.696	ENSRROG00000011414	LSM10	93	68.696	Rhinopithecus_roxellana
ENSAOCG00000015618	LSM10	98	67.797	ENSSBOG00000036413	-	96	67.797	Saimiri_boliviensis_boliviensis
ENSAOCG00000015618	LSM10	98	72.034	ENSSHAG00000018056	LSM10	96	72.034	Sarcophilus_harrisii
ENSAOCG00000015618	LSM10	98	76.271	ENSSFOG00015019954	lsm10	97	76.271	Scleropages_formosus
ENSAOCG00000015618	LSM10	97	88.034	ENSSMAG00000001297	oscp1a	100	88.034	Scophthalmus_maximus
ENSAOCG00000015618	LSM10	98	81.513	ENSSDUG00000007090	oscp1a	97	81.513	Seriola_dumerili
ENSAOCG00000015618	LSM10	100	81.818	ENSSLDG00000000800	oscp1a	100	81.818	Seriola_lalandi_dorsalis
ENSAOCG00000015618	LSM10	98	67.500	ENSSARG00000004211	LSM10	96	67.500	Sorex_araneus
ENSAOCG00000015618	LSM10	100	90.909	ENSSPAG00000009229	oscp1a	100	90.909	Stegastes_partitus
ENSAOCG00000015618	LSM10	98	67.797	ENSSSCG00000038916	LSM10	96	67.797	Sus_scrofa
ENSAOCG00000015618	LSM10	96	66.379	ENSTGUG00000001602	-	95	66.379	Taeniopygia_guttata
ENSAOCG00000015618	LSM10	96	65.517	ENSTGUG00000001600	-	95	65.517	Taeniopygia_guttata
ENSAOCG00000015618	LSM10	98	82.203	ENSTRUG00000010531	oscp1a	95	82.203	Takifugu_rubripes
ENSAOCG00000015618	LSM10	96	68.966	ENSTBEG00000016674	LSM10	94	68.966	Tupaia_belangeri
ENSAOCG00000015618	LSM10	98	69.492	ENSUAMG00000020265	LSM10	96	69.492	Ursus_americanus
ENSAOCG00000015618	LSM10	98	69.492	ENSUMAG00000001438	LSM10	54	69.492	Ursus_maritimus
ENSAOCG00000015618	LSM10	98	69.492	ENSVVUG00000023209	LSM10	96	69.492	Vulpes_vulpes
ENSAOCG00000015618	LSM10	98	62.712	ENSXETG00000027631	lsm10	96	62.712	Xenopus_tropicalis
ENSAOCG00000015618	LSM10	96	75.862	ENSXCOG00000018776	oscp1a	72	76.522	Xiphophorus_couchianus
ENSAOCG00000015618	LSM10	93	76.786	ENSXMAG00000019963	oscp1a	90	76.786	Xiphophorus_maculatus