EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAOCG00000015843 (Gene tree)
Gene ID: 111565767
Gene Symbol: hnrnpub
Alias: hnrnpu|hnrpu|wu:fa66f11|wu:fc18b08|wu:fi89c08|zgc:111835|zgc:136480
Full Name: heterogeneous nuclear ribonucleoprotein U
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Plus strand
Length: 14550 bases
Position: chrNXFZ01001943.1:48981-63530
Accession: 111565767
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000027157	SAP	PF02037.27	2.7e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000018985	-	4463	XM_023266000	ENSAOCP00000027157	797 (aa)	XP_023121768	UPI000C304244

Gene Model

Click here to download ENSAOCG00000015843's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000015843's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAOCG00000015843	hnrnpub	65	47.761	ENSAOCG00000006694	HNRNPUL1	83	42.708
ENSAOCG00000015843	hnrnpub	74	34.167	ENSAOCG00000017297	si:ch211-107m4.1	86	35.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000015843	hnrnpub	89	61.538	ENSG00000153187	HNRNPU	99	65.667	Homo_sapiens
ENSAOCG00000015843	hnrnpub	100	98.120	ENSAPOG00000017400	hnrnpub	100	98.120	Acanthochromis_polyacanthus
ENSAOCG00000015843	hnrnpub	89	61.538	ENSAMEG00000009145	HNRNPU	77	75.000	Ailuropoda_melanoleuca
ENSAOCG00000015843	hnrnpub	100	78.358	ENSACIG00000012138	hnrnpub	96	88.033	Amphilophus_citrinellus
ENSAOCG00000015843	hnrnpub	100	100.000	ENSAPEG00000014679	hnrnpub	100	100.000	Amphiprion_percula
ENSAOCG00000015843	hnrnpub	98	90.554	ENSATEG00000016178	hnrnpub	97	91.058	Anabas_testudineus
ENSAOCG00000015843	hnrnpub	88	70.213	ENSACAG00000004511	HNRNPU	78	62.963	Anolis_carolinensis
ENSAOCG00000015843	hnrnpub	81	59.196	ENSANAG00000033895	-	98	54.473	Aotus_nancymaae
ENSAOCG00000015843	hnrnpub	100	87.097	ENSACLG00000008165	hnrnpub	100	88.104	Astatotilapia_calliptera
ENSAOCG00000015843	hnrnpub	89	61.538	ENSBTAG00000007606	HNRNPU	79	75.000	Bos_taurus
ENSAOCG00000015843	hnrnpub	89	61.538	ENSCJAG00000016914	HNRNPU	79	75.000	Callithrix_jacchus
ENSAOCG00000015843	hnrnpub	81	59.288	ENSCAFG00020000918	HNRNPU	75	57.143	Canis_lupus_dingo
ENSAOCG00000015843	hnrnpub	81	59.288	ENSCHIG00000004900	HNRNPU	75	56.992	Capra_hircus
ENSAOCG00000015843	hnrnpub	89	63.077	ENSCPOG00000011887	HNRNPU	79	77.083	Cavia_porcellus
ENSAOCG00000015843	hnrnpub	89	61.538	ENSCCAG00000037859	-	79	75.000	Cebus_capucinus
ENSAOCG00000015843	hnrnpub	90	59.196	ENSCATG00000035273	HNRNPU	79	75.000	Cercocebus_atys
ENSAOCG00000015843	hnrnpub	89	63.077	ENSCLAG00000007100	HNRNPU	79	77.083	Chinchilla_lanigera
ENSAOCG00000015843	hnrnpub	81	59.196	ENSCSAG00000009219	HNRNPU	75	56.907	Chlorocebus_sabaeus
ENSAOCG00000015843	hnrnpub	87	75.000	ENSCHOG00000001387	HNRNPU	77	67.273	Choloepus_hoffmanni
ENSAOCG00000015843	hnrnpub	97	57.293	ENSCPBG00000009415	HNRNPU	79	75.472	Chrysemys_picta_bellii
ENSAOCG00000015843	hnrnpub	90	59.196	ENSCANG00000022780	HNRNPU	99	53.958	Colobus_angolensis_palliatus
ENSAOCG00000015843	hnrnpub	83	58.146	ENSCGRG00001020525	Hnrnpu	99	50.640	Cricetulus_griseus_chok1gshd
ENSAOCG00000015843	hnrnpub	100	77.818	ENSCSEG00000010804	hnrnpub	100	82.854	Cynoglossus_semilaevis
ENSAOCG00000015843	hnrnpub	89	84.906	ENSCVAG00000004280	hnrnpub	100	74.919	Cyprinodon_variegatus
ENSAOCG00000015843	hnrnpub	100	62.330	ENSDARG00000015206	hnrnpua	100	61.084	Danio_rerio
ENSAOCG00000015843	hnrnpub	100	61.491	ENSDARG00000004735	hnrnpub	100	60.000	Danio_rerio
ENSAOCG00000015843	hnrnpub	99	54.115	ENSDNOG00000000215	HNRNPU	99	52.736	Dasypus_novemcinctus
ENSAOCG00000015843	hnrnpub	81	59.288	ENSDORG00000015491	Hnrnpu	99	52.061	Dipodomys_ordii
ENSAOCG00000015843	hnrnpub	95	58.978	ENSETEG00000014565	HNRNPU	78	75.000	Echinops_telfairi
ENSAOCG00000015843	hnrnpub	82	58.904	ENSEASG00005003017	HNRNPU	75	56.801	Equus_asinus_asinus
ENSAOCG00000015843	hnrnpub	82	59.056	ENSECAG00000007955	HNRNPU	75	56.951	Equus_caballus
ENSAOCG00000015843	hnrnpub	100	73.225	ENSELUG00000010733	hnrnpub	100	74.235	Esox_lucius
ENSAOCG00000015843	hnrnpub	81	59.288	ENSFCAG00000002156	HNRNPU	99	49.691	Felis_catus
ENSAOCG00000015843	hnrnpub	95	59.722	ENSFDAG00000006026	HNRNPU	99	69.091	Fukomys_damarensis
ENSAOCG00000015843	hnrnpub	100	80.268	ENSFHEG00000022639	hnrnpub	100	81.873	Fundulus_heteroclitus
ENSAOCG00000015843	hnrnpub	100	72.596	ENSGMOG00000001755	hnrnpub	99	72.509	Gadus_morhua
ENSAOCG00000015843	hnrnpub	87	75.000	ENSGALG00000010671	HNRNPU	77	75.000	Gallus_gallus
ENSAOCG00000015843	hnrnpub	100	81.393	ENSGAFG00000009369	hnrnpub	100	82.113	Gambusia_affinis
ENSAOCG00000015843	hnrnpub	100	75.000	ENSGACG00000004679	hnrnpub	99	76.443	Gasterosteus_aculeatus
ENSAOCG00000015843	hnrnpub	89	61.538	ENSGGOG00000004061	HNRNPU	79	75.000	Gorilla_gorilla
ENSAOCG00000015843	hnrnpub	100	86.973	ENSHBUG00000012290	hnrnpub	100	88.104	Haplochromis_burtoni
ENSAOCG00000015843	hnrnpub	89	63.077	ENSHGLG00000010594	-	77	77.083	Heterocephalus_glaber_female
ENSAOCG00000015843	hnrnpub	94	70.909	ENSHGLG00100015093	HNRNPU	99	70.909	Heterocephalus_glaber_male
ENSAOCG00000015843	hnrnpub	100	72.563	ENSHCOG00000020091	hnrnpub	100	73.646	Hippocampus_comes
ENSAOCG00000015843	hnrnpub	78	89.362	ENSIPUG00000007749	hnrnpu	93	81.818	Ictalurus_punctatus
ENSAOCG00000015843	hnrnpub	86	86.047	ENSJJAG00000011371	Hnrnpu	79	86.047	Jaculus_jaculus
ENSAOCG00000015843	hnrnpub	100	82.152	ENSKMAG00000004532	hnrnpub	100	84.512	Kryptolebias_marmoratus
ENSAOCG00000015843	hnrnpub	100	86.152	ENSLBEG00000022520	hnrnpub	100	88.617	Labrus_bergylta
ENSAOCG00000015843	hnrnpub	99	46.698	ENSLACG00000017463	HNRNPU	99	46.821	Latimeria_chalumnae
ENSAOCG00000015843	hnrnpub	89	89.362	ENSLOCG00000016652	hnrnpua	99	64.478	Lepisosteus_oculatus
ENSAOCG00000015843	hnrnpub	96	57.121	ENSLAFG00000021377	HNRNPU	79	75.000	Loxodonta_africana
ENSAOCG00000015843	hnrnpub	90	59.196	ENSMFAG00000037308	HNRNPU	79	75.000	Macaca_fascicularis
ENSAOCG00000015843	hnrnpub	81	59.196	ENSMMUG00000021098	HNRNPU	75	56.907	Macaca_mulatta
ENSAOCG00000015843	hnrnpub	90	59.196	ENSMNEG00000043645	HNRNPU	79	75.000	Macaca_nemestrina
ENSAOCG00000015843	hnrnpub	100	89.826	ENSMAMG00000007196	hnrnpub	100	90.819	Mastacembelus_armatus
ENSAOCG00000015843	hnrnpub	100	86.849	ENSMZEG00005003185	hnrnpub	100	87.856	Maylandia_zebra
ENSAOCG00000015843	hnrnpub	83	58.522	ENSMAUG00000008842	Hnrnpu	99	50.349	Mesocricetus_auratus
ENSAOCG00000015843	hnrnpub	99	52.729	ENSMICG00000004616	HNRNPU	79	75.000	Microcebus_murinus
ENSAOCG00000015843	hnrnpub	83	58.371	ENSMOCG00000015623	Hnrnpu	99	50.465	Microtus_ochrogaster
ENSAOCG00000015843	hnrnpub	86	78.261	ENSMODG00000006515	HNRNPU	83	55.507	Monodelphis_domestica
ENSAOCG00000015843	hnrnpub	96	88.832	ENSMALG00000018243	hnrnpub	96	89.376	Monopterus_albus
ENSAOCG00000015843	hnrnpub	81	59.133	MGP_CAROLIEiJ_G0014962	Hnrnpu	99	51.744	Mus_caroli
ENSAOCG00000015843	hnrnpub	81	59.133	ENSMUSG00000039630	Hnrnpu	75	56.992	Mus_musculus
ENSAOCG00000015843	hnrnpub	81	57.829	MGP_PahariEiJ_G0028193	Hnrnpu	80	86.047	Mus_pahari
ENSAOCG00000015843	hnrnpub	81	59.133	MGP_SPRETEiJ_G0015761	Hnrnpu	75	56.992	Mus_spretus
ENSAOCG00000015843	hnrnpub	90	63.077	ENSMLUG00000000475	HNRNPU	80	77.083	Myotis_lucifugus
ENSAOCG00000015843	hnrnpub	99	52.852	ENSNGAG00000019075	Hnrnpu	99	48.951	Nannospalax_galili
ENSAOCG00000015843	hnrnpub	100	86.849	ENSNBRG00000017855	hnrnpub	100	87.856	Neolamprologus_brichardi
ENSAOCG00000015843	hnrnpub	79	78.261	ENSMEUG00000000541	HNRNPU	83	53.881	Notamacropus_eugenii
ENSAOCG00000015843	hnrnpub	100	86.142	ENSONIG00000001260	hnrnpub	100	85.643	Oreochromis_niloticus
ENSAOCG00000015843	hnrnpub	87	61.538	ENSOCUG00000014469	HNRNPU	72	75.000	Oryctolagus_cuniculus
ENSAOCG00000015843	hnrnpub	100	82.506	ENSORLG00000016114	hnrnpub	100	84.988	Oryzias_latipes
ENSAOCG00000015843	hnrnpub	100	83.024	ENSORLG00020005363	hnrnpub	100	85.360	Oryzias_latipes_hni
ENSAOCG00000015843	hnrnpub	100	82.426	ENSORLG00015001190	hnrnpub	100	85.130	Oryzias_latipes_hsok
ENSAOCG00000015843	hnrnpub	100	83.292	ENSOMEG00000014951	hnrnpub	100	85.181	Oryzias_melastigma
ENSAOCG00000015843	hnrnpub	99	52.184	ENSOGAG00000014024	HNRNPU	75	56.992	Otolemur_garnettii
ENSAOCG00000015843	hnrnpub	87	75.000	ENSOARG00000004985	HNRNPU	86	67.273	Ovis_aries
ENSAOCG00000015843	hnrnpub	89	61.538	ENSPPAG00000038652	HNRNPU	79	75.000	Pan_paniscus
ENSAOCG00000015843	hnrnpub	91	61.538	ENSPPRG00000002662	HNRNPU	79	75.000	Panthera_pardus
ENSAOCG00000015843	hnrnpub	89	61.538	ENSPTRG00000002182	HNRNPU	79	75.000	Pan_troglodytes
ENSAOCG00000015843	hnrnpub	81	59.196	ENSPANG00000011643	HNRNPU	98	54.339	Papio_anubis
ENSAOCG00000015843	hnrnpub	100	67.840	ENSPKIG00000022332	hnrnpub	100	65.697	Paramormyrops_kingsleyae
ENSAOCG00000015843	hnrnpub	100	66.949	ENSPKIG00000006885	hnrnpua	100	66.143	Paramormyrops_kingsleyae
ENSAOCG00000015843	hnrnpub	86	78.261	ENSPCIG00000008657	HNRNPU	99	47.450	Phascolarctos_cinereus
ENSAOCG00000015843	hnrnpub	100	82.864	ENSPFOG00000002908	hnrnpub	100	84.371	Poecilia_formosa
ENSAOCG00000015843	hnrnpub	100	82.375	ENSPLAG00000004160	hnrnpub	100	83.476	Poecilia_latipinna
ENSAOCG00000015843	hnrnpub	89	61.538	ENSPCOG00000018655	-	79	75.000	Propithecus_coquereli
ENSAOCG00000015843	hnrnpub	81	56.677	ENSPCOG00000003883	-	99	49.349	Propithecus_coquereli
ENSAOCG00000015843	hnrnpub	89	61.538	ENSPVAG00000002581	HNRNPU	79	75.000	Pteropus_vampyrus
ENSAOCG00000015843	hnrnpub	100	87.221	ENSPNYG00000021642	hnrnpub	100	88.228	Pundamilia_nyererei
ENSAOCG00000015843	hnrnpub	100	67.227	ENSPNAG00000001055	hnrnpub	100	65.738	Pygocentrus_nattereri
ENSAOCG00000015843	hnrnpub	81	59.133	ENSRNOG00000033790	Hnrnpu	99	49.767	Rattus_norvegicus
ENSAOCG00000015843	hnrnpub	81	58.423	ENSRBIG00000031519	HNRNPU	98	53.949	Rhinopithecus_bieti
ENSAOCG00000015843	hnrnpub	83	58.471	ENSRROG00000041642	HNRNPU	98	54.050	Rhinopithecus_roxellana
ENSAOCG00000015843	hnrnpub	100	68.029	ENSSFOG00015001124	hnrnpub	100	67.431	Scleropages_formosus
ENSAOCG00000015843	hnrnpub	100	65.827	ENSSFOG00015019004	hnrnpu	100	65.389	Scleropages_formosus
ENSAOCG00000015843	hnrnpub	85	91.594	ENSSMAG00000003607	hnrnpub	100	87.039	Scophthalmus_maximus
ENSAOCG00000015843	hnrnpub	100	89.338	ENSSDUG00000005912	hnrnpub	100	91.176	Seriola_dumerili
ENSAOCG00000015843	hnrnpub	100	89.133	ENSSLDG00000004899	hnrnpub	100	90.965	Seriola_lalandi_dorsalis
ENSAOCG00000015843	hnrnpub	83	58.459	ENSSPUG00000011393	HNRNPU	79	76.087	Sphenodon_punctatus
ENSAOCG00000015843	hnrnpub	100	96.629	ENSSPAG00000011853	hnrnpub	100	96.629	Stegastes_partitus
ENSAOCG00000015843	hnrnpub	87	75.000	ENSSSCG00000010877	HNRNPU	79	75.000	Sus_scrofa
ENSAOCG00000015843	hnrnpub	100	82.152	ENSTRUG00000007759	hnrnpub	100	82.252	Takifugu_rubripes
ENSAOCG00000015843	hnrnpub	100	77.391	ENSTNIG00000009725	hnrnpub	100	77.262	Tetraodon_nigroviridis
ENSAOCG00000015843	hnrnpub	89	61.538	ENSUAMG00000021120	HNRNPU	79	75.000	Ursus_americanus
ENSAOCG00000015843	hnrnpub	86	56.825	ENSUMAG00000012322	HNRNPU	100	52.334	Ursus_maritimus
ENSAOCG00000015843	hnrnpub	82	61.538	ENSVPAG00000010520	HNRNPU	83	67.273	Vicugna_pacos
ENSAOCG00000015843	hnrnpub	81	59.288	ENSVVUG00000026524	HNRNPU	75	57.143	Vulpes_vulpes
ENSAOCG00000015843	hnrnpub	99	50.767	ENSXETG00000011386	hnrnpu	99	51.594	Xenopus_tropicalis
ENSAOCG00000015843	hnrnpub	100	82.418	ENSXMAG00000010356	hnrnpub	100	84.044	Xiphophorus_maculatus