EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAOCG00000015908 (Gene tree)
Gene ID: 111565246
Gene Symbol: -
Alias: -
Full Name: RAB13%2C member RAS oncogene family
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Minus strand
Length: 8822 bases
Position: chrNXFZ01006387.1:23088-31909
Accession: 111565246
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000027177	MMR_HSR1	PF01926.23	4.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000019018	-	3220	XM_023265281	ENSAOCP00000027177	200 (aa)	XP_023121049	UPI000B8F5372

Gene Model

Click here to download ENSAOCG00000015908's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000015908's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAOCG00000015908	-	95	42.932	ENSAOCG00000013479	rab18b	93	42.932
ENSAOCG00000015908	-	79	44.937	ENSAOCG00000022426	RAB41	75	44.937
ENSAOCG00000015908	-	95	40.104	ENSAOCG00000000090	rab5aa	89	40.104
ENSAOCG00000015908	-	87	47.399	ENSAOCG00000018050	rab11ba	79	47.399
ENSAOCG00000015908	-	79	43.671	ENSAOCG00000003528	rab25a	75	43.671
ENSAOCG00000015908	-	82	38.095	ENSAOCG00000013441	rab9a	81	38.095
ENSAOCG00000015908	-	98	31.658	ENSAOCG00000010160	si:cabz01085950.1	95	31.658
ENSAOCG00000015908	-	77	36.364	ENSAOCG00000007510	rhebl1	83	36.364
ENSAOCG00000015908	-	90	44.865	ENSAOCG00000016233	rab18a	88	44.865
ENSAOCG00000015908	-	86	48.538	ENSAOCG00000012556	rab30	61	48.538
ENSAOCG00000015908	-	90	39.594	ENSAOCG00000005790	rab33ba	81	39.594
ENSAOCG00000015908	-	88	54.857	ENSAOCG00000005797	rab15	82	54.857
ENSAOCG00000015908	-	79	45.570	ENSAOCG00000011103	rab6bb	76	45.570
ENSAOCG00000015908	-	96	35.897	ENSAOCG00000012766	rras	96	35.897
ENSAOCG00000015908	-	88	38.547	ENSAOCG00000008820	-	86	38.547
ENSAOCG00000015908	-	86	44.767	ENSAOCG00000015713	rab25b	83	44.767
ENSAOCG00000015908	-	79	41.250	ENSAOCG00000018241	rab36	60	41.250
ENSAOCG00000015908	-	94	42.347	ENSAOCG00000007448	rab33a	70	42.347
ENSAOCG00000015908	-	58	30.769	ENSAOCG00000022197	arl3	63	30.769
ENSAOCG00000015908	-	90	33.514	ENSAOCG00000002921	rras2	94	34.010
ENSAOCG00000015908	-	85	46.512	ENSAOCG00000007928	RAB39B	81	46.512
ENSAOCG00000015908	-	96	36.548	ENSAOCG00000017428	kras	98	36.548
ENSAOCG00000015908	-	98	54.500	ENSAOCG00000020606	-	98	54.500
ENSAOCG00000015908	-	93	45.161	ENSAOCG00000020106	rab11a	87	45.161
ENSAOCG00000015908	-	73	44.371	ENSAOCG00000005301	-	62	45.033
ENSAOCG00000015908	-	75	50.667	ENSAOCG00000015948	-	72	50.667
ENSAOCG00000015908	-	79	40.000	ENSAOCG00000007106	rab34b	58	40.000
ENSAOCG00000015908	-	79	44.304	ENSAOCG00000012277	-	76	44.304
ENSAOCG00000015908	-	84	37.059	ENSAOCG00000017207	si:ch73-116o1.2	81	37.059
ENSAOCG00000015908	-	85	50.000	ENSAOCG00000016825	si:dkey-16l2.16	87	47.802
ENSAOCG00000015908	-	70	58.571	ENSAOCG00000013808	-	92	63.333
ENSAOCG00000015908	-	86	50.581	ENSAOCG00000002130	rab12	71	50.581
ENSAOCG00000015908	-	88	37.288	ENSAOCG00000004234	rab23	90	37.037
ENSAOCG00000015908	-	97	39.423	ENSAOCG00000018191	-	97	39.423
ENSAOCG00000015908	-	89	56.180	ENSAOCG00000024149	-	83	56.180
ENSAOCG00000015908	-	84	41.420	ENSAOCG00000012921	rab42a	65	41.420
ENSAOCG00000015908	-	87	36.517	ENSAOCG00000020491	si:dkey-13a21.4	87	36.517
ENSAOCG00000015908	-	87	47.399	ENSAOCG00000018239	rab11bb	79	47.399
ENSAOCG00000015908	-	86	57.310	ENSAOCG00000002532	RAB15	81	57.310
ENSAOCG00000015908	-	84	47.619	ENSAOCG00000014658	rab2a	79	47.619
ENSAOCG00000015908	-	84	42.775	ENSAOCG00000002298	rab6ba	83	42.775
ENSAOCG00000015908	-	81	42.857	ENSAOCG00000016614	rab5c	88	38.144
ENSAOCG00000015908	-	84	44.910	ENSAOCG00000008492	rab14	78	44.910
ENSAOCG00000015908	-	99	47.525	ENSAOCG00000005934	rab35b	100	47.525
ENSAOCG00000015908	-	57	35.965	ENSAOCG00000010636	RAP2B	89	36.508
ENSAOCG00000015908	-	96	35.417	ENSAOCG00000011843	hrasb	98	35.417
ENSAOCG00000015908	-	84	39.306	ENSAOCG00000011596	RAB9A	86	39.306
ENSAOCG00000015908	-	95	39.000	ENSAOCG00000024675	zgc:101559	84	39.000
ENSAOCG00000015908	-	98	54.000	ENSAOCG00000006385	rab1ab	98	54.000
ENSAOCG00000015908	-	79	40.000	ENSAOCG00000018544	rab34a	60	40.000
ENSAOCG00000015908	-	83	31.953	ENSAOCG00000013791	-	78	31.953
ENSAOCG00000015908	-	84	39.306	ENSAOCG00000020020	-	79	39.306
ENSAOCG00000015908	-	80	38.509	ENSAOCG00000009167	-	70	38.509
ENSAOCG00000015908	-	85	41.143	ENSAOCG00000022810	rab9b	86	41.143
ENSAOCG00000015908	-	81	39.752	ENSAOCG00000001554	rab22a	83	39.752
ENSAOCG00000015908	-	77	35.714	ENSAOCG00000010265	rheb	83	35.714
ENSAOCG00000015908	-	87	47.399	ENSAOCG00000018849	-	79	47.399
ENSAOCG00000015908	-	96	30.846	ENSAOCG00000005269	rasl11b	79	31.343
ENSAOCG00000015908	-	97	52.525	ENSAOCG00000003965	rab1ba	98	52.525
ENSAOCG00000015908	-	81	32.370	ENSAOCG00000007065	rasl11a	67	32.370
ENSAOCG00000015908	-	97	43.069	ENSAOCG00000015678	rab11al	94	43.069
ENSAOCG00000015908	-	80	35.185	ENSAOCG00000008069	rabl2	71	35.185
ENSAOCG00000015908	-	88	38.547	ENSAOCG00000005772	RAB7A	86	38.547

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000015908	-	100	100.000	ENSAPOG00000001040	-	100	100.000	Acanthochromis_polyacanthus
ENSAOCG00000015908	-	100	66.667	ENSACIG00000003157	-	100	66.667	Amphilophus_citrinellus
ENSAOCG00000015908	-	100	100.000	ENSAPEG00000004121	-	100	100.000	Amphiprion_percula
ENSAOCG00000015908	-	100	94.000	ENSATEG00000023662	-	100	94.000	Anabas_testudineus
ENSAOCG00000015908	-	100	96.500	ENSACLG00000019643	-	100	96.500	Astatotilapia_calliptera
ENSAOCG00000015908	-	100	93.500	ENSCVAG00000022649	-	100	93.500	Cyprinodon_variegatus
ENSAOCG00000015908	-	86	73.256	ENSDARG00000103934	megf8	99	73.256	Danio_rerio
ENSAOCG00000015908	-	100	92.000	ENSGAFG00000014787	-	100	92.000	Gambusia_affinis
ENSAOCG00000015908	-	100	96.500	ENSHBUG00000003728	-	100	96.500	Haplochromis_burtoni
ENSAOCG00000015908	-	100	96.500	ENSMZEG00005015817	-	100	96.500	Maylandia_zebra
ENSAOCG00000015908	-	100	96.000	ENSMMOG00000003924	-	100	96.000	Mola_mola
ENSAOCG00000015908	-	100	96.000	ENSMALG00000020807	-	100	96.000	Monopterus_albus
ENSAOCG00000015908	-	54	90.741	ENSOPRG00000014416	-	100	90.741	Ochotona_princeps
ENSAOCG00000015908	-	100	92.500	ENSORLG00000025395	-	100	92.500	Oryzias_latipes
ENSAOCG00000015908	-	100	92.500	ENSORLG00020009535	-	100	92.500	Oryzias_latipes_hni
ENSAOCG00000015908	-	100	93.000	ENSORLG00015015518	-	100	93.000	Oryzias_latipes_hsok
ENSAOCG00000015908	-	100	89.055	ENSPKIG00000014528	-	100	89.055	Paramormyrops_kingsleyae
ENSAOCG00000015908	-	100	93.500	ENSPFOG00000014418	-	100	93.500	Poecilia_formosa
ENSAOCG00000015908	-	100	93.500	ENSPLAG00000003181	-	100	93.500	Poecilia_latipinna
ENSAOCG00000015908	-	100	93.500	ENSPMEG00000008020	-	100	93.500	Poecilia_mexicana
ENSAOCG00000015908	-	100	93.500	ENSPMEG00000022988	-	100	93.500	Poecilia_mexicana
ENSAOCG00000015908	-	100	95.500	ENSPNYG00000004681	-	100	95.500	Pundamilia_nyererei
ENSAOCG00000015908	-	100	91.500	ENSSFOG00015021754	rab13	100	91.500	Scleropages_formosus
ENSAOCG00000015908	-	100	97.500	ENSSMAG00000016376	-	100	97.500	Scophthalmus_maximus
ENSAOCG00000015908	-	100	67.150	ENSSMAG00000002569	-	100	67.150	Scophthalmus_maximus
ENSAOCG00000015908	-	100	99.000	ENSSDUG00000006307	-	100	99.000	Seriola_dumerili
ENSAOCG00000015908	-	100	99.000	ENSSLDG00000015823	-	100	99.000	Seriola_lalandi_dorsalis
ENSAOCG00000015908	-	100	99.000	ENSSPAG00000022440	-	100	99.000	Stegastes_partitus
ENSAOCG00000015908	-	100	95.500	ENSTNIG00000018319	-	100	95.500	Tetraodon_nigroviridis
ENSAOCG00000015908	-	100	92.500	ENSXMAG00000016094	-	100	92.500	Xiphophorus_maculatus