EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAOCG00000015914 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Plus strand
Length: 5599 bases
Position: chrNXFZ01003584.1:127242-132840
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000011560	RRM_1	PF00076.22	2.7e-32	1	2
ENSAOCP00000011560	RRM_1	PF00076.22	2.7e-32	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000030292	-	840	-	ENSAOCP00000011560	279 (aa)	-	-

Gene Model

Click here to download ENSAOCG00000015914's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000015914's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAOCG00000015914	-	59	33.333	ENSAOCG00000014822	msi2a	61	33.333
ENSAOCG00000015914	-	61	37.647	ENSAOCG00000020596	-	54	37.647
ENSAOCG00000015914	-	71	54.040	ENSAOCG00000005289	-	53	56.000
ENSAOCG00000015914	-	67	39.037	ENSAOCG00000009031	-	53	38.506
ENSAOCG00000015914	-	63	72.671	ENSAOCG00000015951	-	96	72.671
ENSAOCG00000015914	-	56	31.579	ENSAOCG00000006342	slirp	80	31.579
ENSAOCG00000015914	-	68	38.384	ENSAOCG00000014191	hnrnpd	62	37.427
ENSAOCG00000015914	-	62	30.636	ENSAOCG00000020211	tardbpl	55	30.636

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000015914	-	63	72.671	ENSAPEG00000002274	-	96	72.671	Amphiprion_percula
ENSAOCG00000015914	-	72	99.505	ENSAPEG00000002224	-	85	99.505	Amphiprion_percula
ENSAOCG00000015914	-	69	94.301	ENSACLG00000008978	-	89	93.846	Astatotilapia_calliptera
ENSAOCG00000015914	-	70	90.769	ENSCVAG00000008324	-	84	90.769	Cyprinodon_variegatus
ENSAOCG00000015914	-	63	35.762	ENSEBUG00000010003	-	82	35.762	Eptatretus_burgeri
ENSAOCG00000015914	-	63	74.545	ENSELUG00000014407	-	98	74.545	Esox_lucius
ENSAOCG00000015914	-	69	94.301	ENSHBUG00000023867	-	89	93.846	Haplochromis_burtoni
ENSAOCG00000015914	-	64	80.447	ENSHCOG00000007180	-	76	80.447	Hippocampus_comes
ENSAOCG00000015914	-	63	90.964	ENSLBEG00000006362	-	79	90.964	Labrus_bergylta
ENSAOCG00000015914	-	58	73.214	ENSLOCG00000012121	-	65	73.214	Lepisosteus_oculatus
ENSAOCG00000015914	-	70	95.361	ENSMAMG00000017728	-	74	95.385	Mastacembelus_armatus
ENSAOCG00000015914	-	65	94.444	ENSMZEG00005001063	-	81	94.444	Maylandia_zebra
ENSAOCG00000015914	-	63	71.605	ENSMMOG00000004242	-	98	71.605	Mola_mola
ENSAOCG00000015914	-	63	42.778	ENSMEUG00000003051	-	57	42.778	Notamacropus_eugenii
ENSAOCG00000015914	-	66	59.563	ENSORLG00000030284	-	66	53.846	Oryzias_latipes
ENSAOCG00000015914	-	65	61.236	ENSORLG00000023176	-	58	62.428	Oryzias_latipes
ENSAOCG00000015914	-	65	60.894	ENSORLG00000023542	-	61	62.069	Oryzias_latipes
ENSAOCG00000015914	-	64	58.960	ENSORLG00020006029	-	67	55.497	Oryzias_latipes_hni
ENSAOCG00000015914	-	63	90.805	ENSORLG00020007171	-	97	90.805	Oryzias_latipes_hni
ENSAOCG00000015914	-	63	58.788	ENSORLG00020007084	-	77	59.627	Oryzias_latipes_hni
ENSAOCG00000015914	-	64	61.111	ENSOMEG00000002000	-	67	61.111	Oryzias_melastigma
ENSAOCG00000015914	-	80	47.101	ENSOMEG00000002084	-	70	63.415	Oryzias_melastigma
ENSAOCG00000015914	-	66	56.684	ENSOMEG00000012368	-	66	57.222	Oryzias_melastigma
ENSAOCG00000015914	-	67	55.851	ENSOMEG00000021030	-	70	56.667	Oryzias_melastigma
ENSAOCG00000015914	-	73	52.657	ENSOMEG00000002509	-	76	57.222	Oryzias_melastigma
ENSAOCG00000015914	-	72	56.684	ENSOMEG00000006903	-	76	57.222	Oryzias_melastigma
ENSAOCG00000015914	-	63	53.614	ENSOMEG00000009566	-	87	53.614	Oryzias_melastigma
ENSAOCG00000015914	-	73	56.684	ENSOMEG00000023475	-	71	57.222	Oryzias_melastigma
ENSAOCG00000015914	-	62	48.276	ENSOMEG00000006327	-	60	48.276	Oryzias_melastigma
ENSAOCG00000015914	-	70	90.769	ENSPREG00000010603	-	65	90.769	Poecilia_reticulata
ENSAOCG00000015914	-	69	94.301	ENSPNYG00000020763	-	89	93.846	Pundamilia_nyererei
ENSAOCG00000015914	-	63	71.429	ENSPNAG00000018051	-	81	71.429	Pygocentrus_nattereri
ENSAOCG00000015914	-	63	62.147	ENSSHAG00000015609	-	81	62.147	Sarcophilus_harrisii
ENSAOCG00000015914	-	63	98.193	ENSSDUG00000002394	-	87	98.193	Seriola_dumerili
ENSAOCG00000015914	-	63	73.684	ENSSLDG00000024685	-	86	73.684	Seriola_lalandi_dorsalis