EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAOCG00000016066 (Gene tree)
Gene ID: 111569261
Gene Symbol: lsg1
Alias: fb99b06|wu:fb99b06|zgc:76988
Full Name: large 60S subunit nuclear export GTPase 1
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Minus strand
Length: 17054 bases
Position: chrNXFZ01002320.1:193443-210496
Accession: 111569261
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000011692	MMR_HSR1	PF01926.23	7e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000019194	-	2508	XM_023271294	ENSAOCP00000011692	621 (aa)	XP_023127062	UPI000C311A0E

Gene Model

Click here to download ENSAOCG00000016066's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000016066's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAOCG00000016066	lsg1	51	33.014	ENSAOCG00000020369	gnl3l	53	34.392

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000016066	lsg1	99	63.788	ENSG00000041802	LSG1	98	74.713	Homo_sapiens
ENSAOCG00000016066	lsg1	100	96.135	ENSAPOG00000009694	lsg1	100	96.135	Acanthochromis_polyacanthus
ENSAOCG00000016066	lsg1	100	63.554	ENSAMEG00000009343	LSG1	100	62.745	Ailuropoda_melanoleuca
ENSAOCG00000016066	lsg1	99	80.635	ENSACIG00000012406	lsg1	100	81.102	Amphilophus_citrinellus
ENSAOCG00000016066	lsg1	100	98.873	ENSAPEG00000003252	lsg1	100	98.873	Amphiprion_percula
ENSAOCG00000016066	lsg1	99	82.126	ENSATEG00000011794	lsg1	100	81.546	Anabas_testudineus
ENSAOCG00000016066	lsg1	95	62.381	ENSACAG00000004222	LSG1	100	62.261	Anolis_carolinensis
ENSAOCG00000016066	lsg1	99	64.545	ENSANAG00000021153	LSG1	99	64.242	Aotus_nancymaae
ENSAOCG00000016066	lsg1	100	81.135	ENSACLG00000000520	lsg1	100	80.335	Astatotilapia_calliptera
ENSAOCG00000016066	lsg1	100	73.416	ENSAMXG00000008271	lsg1	100	73.498	Astyanax_mexicanus
ENSAOCG00000016066	lsg1	99	64.985	ENSBTAG00000008461	LSG1	99	64.036	Bos_taurus
ENSAOCG00000016066	lsg1	76	40.252	WBGene00016907	C53H9.2	81	55.645	Caenorhabditis_elegans
ENSAOCG00000016066	lsg1	99	64.545	ENSCJAG00000013962	LSG1	99	64.091	Callithrix_jacchus
ENSAOCG00000016066	lsg1	95	66.032	ENSCAFG00000013445	LSG1	100	65.501	Canis_familiaris
ENSAOCG00000016066	lsg1	100	64.608	ENSCAFG00020002216	LSG1	99	64.640	Canis_lupus_dingo
ENSAOCG00000016066	lsg1	100	64.472	ENSCHIG00000015769	LSG1	100	64.319	Capra_hircus
ENSAOCG00000016066	lsg1	99	63.389	ENSTSYG00000001447	LSG1	99	62.784	Carlito_syrichta
ENSAOCG00000016066	lsg1	95	66.722	ENSCAPG00000009856	LSG1	99	66.612	Cavia_aperea
ENSAOCG00000016066	lsg1	99	63.636	ENSCCAG00000035744	LSG1	99	63.182	Cebus_capucinus
ENSAOCG00000016066	lsg1	99	64.697	ENSCATG00000042060	LSG1	99	62.727	Cercocebus_atys
ENSAOCG00000016066	lsg1	99	64.848	ENSCSAG00000008796	LSG1	92	64.242	Chlorocebus_sabaeus
ENSAOCG00000016066	lsg1	100	65.559	ENSCPBG00000015941	LSG1	83	65.559	Chrysemys_picta_bellii
ENSAOCG00000016066	lsg1	84	48.948	ENSCING00000007079	-	99	55.251	Ciona_intestinalis
ENSAOCG00000016066	lsg1	83	51.292	ENSCSAVG00000002514	-	98	51.292	Ciona_savignyi
ENSAOCG00000016066	lsg1	99	64.848	ENSCANG00000030709	LSG1	99	64.242	Colobus_angolensis_palliatus
ENSAOCG00000016066	lsg1	99	64.119	ENSCGRG00001019846	Lsg1	99	64.899	Cricetulus_griseus_chok1gshd
ENSAOCG00000016066	lsg1	99	64.055	ENSCGRG00000014617	Lsg1	99	64.670	Cricetulus_griseus_crigri
ENSAOCG00000016066	lsg1	99	78.447	ENSCSEG00000008522	lsg1	100	78.261	Cynoglossus_semilaevis
ENSAOCG00000016066	lsg1	98	80.065	ENSCVAG00000002484	lsg1	100	80.573	Cyprinodon_variegatus
ENSAOCG00000016066	lsg1	100	74.383	ENSDARG00000015352	lsg1	100	74.074	Danio_rerio
ENSAOCG00000016066	lsg1	99	63.733	ENSDNOG00000006224	LSG1	99	63.278	Dasypus_novemcinctus
ENSAOCG00000016066	lsg1	99	51.506	FBgn0266284	Ns3	99	51.491	Drosophila_melanogaster
ENSAOCG00000016066	lsg1	87	70.667	ENSETEG00000003888	LSG1	89	70.667	Echinops_telfairi
ENSAOCG00000016066	lsg1	88	56.870	ENSEBUG00000003119	lsg1	85	55.348	Eptatretus_burgeri
ENSAOCG00000016066	lsg1	99	64.448	ENSEASG00005000678	LSG1	99	64.145	Equus_asinus_asinus
ENSAOCG00000016066	lsg1	99	63.843	ENSECAG00000017659	LSG1	99	63.389	Equus_caballus
ENSAOCG00000016066	lsg1	86	56.667	ENSEEUG00000015217	LSG1	87	56.667	Erinaceus_europaeus
ENSAOCG00000016066	lsg1	100	73.479	ENSELUG00000023973	lsg1	100	73.406	Esox_lucius
ENSAOCG00000016066	lsg1	100	63.293	ENSFCAG00000024957	LSG1	100	63.008	Felis_catus
ENSAOCG00000016066	lsg1	93	63.533	ENSFALG00000007210	LSG1	94	62.399	Ficedula_albicollis
ENSAOCG00000016066	lsg1	99	65.528	ENSFDAG00000017373	LSG1	99	64.877	Fukomys_damarensis
ENSAOCG00000016066	lsg1	98	80.160	ENSFHEG00000003680	lsg1	100	78.483	Fundulus_heteroclitus
ENSAOCG00000016066	lsg1	99	71.885	ENSGMOG00000015834	lsg1	100	70.781	Gadus_morhua
ENSAOCG00000016066	lsg1	99	61.353	ENSGALG00000007058	LSG1	87	61.329	Gallus_gallus
ENSAOCG00000016066	lsg1	98	80.551	ENSGAFG00000015831	lsg1	100	80.569	Gambusia_affinis
ENSAOCG00000016066	lsg1	99	79.332	ENSGACG00000009323	lsg1	100	78.505	Gasterosteus_aculeatus
ENSAOCG00000016066	lsg1	99	64.091	ENSGGOG00000000520	LSG1	99	64.091	Gorilla_gorilla
ENSAOCG00000016066	lsg1	100	82.143	ENSHBUG00000005659	lsg1	100	81.327	Haplochromis_burtoni
ENSAOCG00000016066	lsg1	99	63.199	ENSHGLG00000017390	LSG1	99	63.199	Heterocephalus_glaber_female
ENSAOCG00000016066	lsg1	99	63.199	ENSHGLG00100018587	LSG1	99	63.199	Heterocephalus_glaber_male
ENSAOCG00000016066	lsg1	98	79.081	ENSHCOG00000016848	lsg1	100	78.825	Hippocampus_comes
ENSAOCG00000016066	lsg1	100	74.646	ENSIPUG00000008631	lsg1	100	74.103	Ictalurus_punctatus
ENSAOCG00000016066	lsg1	75	58.532	ENSSTOG00000010234	LSG1	92	59.163	Ictidomys_tridecemlineatus
ENSAOCG00000016066	lsg1	99	66.094	ENSJJAG00000015513	Lsg1	99	65.781	Jaculus_jaculus
ENSAOCG00000016066	lsg1	99	78.710	ENSKMAG00000009681	lsg1	100	78.515	Kryptolebias_marmoratus
ENSAOCG00000016066	lsg1	99	78.191	ENSLBEG00000024261	lsg1	100	79.114	Labrus_bergylta
ENSAOCG00000016066	lsg1	100	66.617	ENSLACG00000013399	LSG1	100	65.817	Latimeria_chalumnae
ENSAOCG00000016066	lsg1	99	69.969	ENSLOCG00000004918	lsg1	100	68.060	Lepisosteus_oculatus
ENSAOCG00000016066	lsg1	99	65.177	ENSLAFG00000012919	-	99	64.561	Loxodonta_africana
ENSAOCG00000016066	lsg1	99	64.697	ENSMFAG00000039903	LSG1	99	62.727	Macaca_fascicularis
ENSAOCG00000016066	lsg1	99	64.697	ENSMMUG00000010708	LSG1	99	64.091	Macaca_mulatta
ENSAOCG00000016066	lsg1	99	64.545	ENSMNEG00000031538	LSG1	99	62.727	Macaca_nemestrina
ENSAOCG00000016066	lsg1	99	64.394	ENSMLEG00000041184	LSG1	99	64.091	Mandrillus_leucophaeus
ENSAOCG00000016066	lsg1	100	78.898	ENSMAMG00000000470	lsg1	100	78.268	Mastacembelus_armatus
ENSAOCG00000016066	lsg1	100	82.298	ENSMZEG00005017865	lsg1	100	81.481	Maylandia_zebra
ENSAOCG00000016066	lsg1	89	62.458	ENSMGAG00000007050	LSG1	99	62.437	Meleagris_gallopavo
ENSAOCG00000016066	lsg1	91	63.951	ENSMAUG00000016976	Lsg1	92	63.543	Mesocricetus_auratus
ENSAOCG00000016066	lsg1	99	64.242	ENSMICG00000049087	LSG1	99	62.930	Microcebus_murinus
ENSAOCG00000016066	lsg1	99	63.804	ENSMOCG00000022136	Lsg1	99	63.804	Microtus_ochrogaster
ENSAOCG00000016066	lsg1	99	77.362	ENSMMOG00000008884	lsg1	100	77.033	Mola_mola
ENSAOCG00000016066	lsg1	99	56.832	ENSMODG00000019828	LSG1	99	56.327	Monodelphis_domestica
ENSAOCG00000016066	lsg1	100	65.391	MGP_CAROLIEiJ_G0020648	Lsg1	100	65.443	Mus_caroli
ENSAOCG00000016066	lsg1	100	64.606	ENSMUSG00000022538	Lsg1	100	64.915	Mus_musculus
ENSAOCG00000016066	lsg1	99	64.899	MGP_PahariEiJ_G0016352	Lsg1	100	64.319	Mus_pahari
ENSAOCG00000016066	lsg1	100	64.451	MGP_SPRETEiJ_G0021544	Lsg1	100	64.760	Mus_spretus
ENSAOCG00000016066	lsg1	100	63.785	ENSMPUG00000003734	LSG1	100	63.134	Mustela_putorius_furo
ENSAOCG00000016066	lsg1	100	63.705	ENSMLUG00000012548	LSG1	100	64.482	Myotis_lucifugus
ENSAOCG00000016066	lsg1	99	63.287	ENSNGAG00000021872	Lsg1	99	63.287	Nannospalax_galili
ENSAOCG00000016066	lsg1	99	65.000	ENSNLEG00000008293	LSG1	99	64.848	Nomascus_leucogenys
ENSAOCG00000016066	lsg1	70	72.165	ENSMEUG00000009041	-	82	72.165	Notamacropus_eugenii
ENSAOCG00000016066	lsg1	100	80.740	ENSONIG00000002635	lsg1	100	81.164	Oreochromis_niloticus
ENSAOCG00000016066	lsg1	95	66.986	ENSOANG00000012742	LSG1	99	66.397	Ornithorhynchus_anatinus
ENSAOCG00000016066	lsg1	99	64.060	ENSOCUG00000004817	LSG1	99	63.910	Oryctolagus_cuniculus
ENSAOCG00000016066	lsg1	99	78.560	ENSORLG00000007695	lsg1	100	78.130	Oryzias_latipes
ENSAOCG00000016066	lsg1	99	79.066	ENSORLG00020016286	lsg1	100	78.233	Oryzias_latipes_hni
ENSAOCG00000016066	lsg1	99	79.288	ENSORLG00015012025	lsg1	100	78.922	Oryzias_latipes_hsok
ENSAOCG00000016066	lsg1	99	77.310	ENSOMEG00000022379	lsg1	100	77.302	Oryzias_melastigma
ENSAOCG00000016066	lsg1	99	63.855	ENSOGAG00000003475	LSG1	99	63.855	Otolemur_garnettii
ENSAOCG00000016066	lsg1	100	64.787	ENSOARG00000020403	LSG1	100	64.787	Ovis_aries
ENSAOCG00000016066	lsg1	99	64.545	ENSPPAG00000029271	LSG1	99	63.939	Pan_paniscus
ENSAOCG00000016066	lsg1	100	62.631	ENSPPRG00000010281	LSG1	100	62.649	Panthera_pardus
ENSAOCG00000016066	lsg1	100	63.293	ENSPTIG00000010789	LSG1	100	63.308	Panthera_tigris_altaica
ENSAOCG00000016066	lsg1	99	64.394	ENSPTRG00000015760	LSG1	99	63.788	Pan_troglodytes
ENSAOCG00000016066	lsg1	99	64.394	ENSPANG00000018249	LSG1	99	62.424	Papio_anubis
ENSAOCG00000016066	lsg1	99	72.397	ENSPKIG00000002895	lsg1	99	73.028	Paramormyrops_kingsleyae
ENSAOCG00000016066	lsg1	95	61.648	ENSPSIG00000009821	LSG1	99	60.754	Pelodiscus_sinensis
ENSAOCG00000016066	lsg1	95	78.642	ENSPMGG00000000931	lsg1	100	77.778	Periophthalmus_magnuspinnatus
ENSAOCG00000016066	lsg1	99	63.511	ENSPEMG00000012082	-	99	63.511	Peromyscus_maniculatus_bairdii
ENSAOCG00000016066	lsg1	99	59.398	ENSPMAG00000007451	lsg1	99	58.657	Petromyzon_marinus
ENSAOCG00000016066	lsg1	99	65.285	ENSPCIG00000013890	LSG1	82	65.285	Phascolarctos_cinereus
ENSAOCG00000016066	lsg1	98	81.059	ENSPFOG00000021882	lsg1	100	80.282	Poecilia_formosa
ENSAOCG00000016066	lsg1	98	80.096	ENSPLAG00000019536	lsg1	100	79.343	Poecilia_latipinna
ENSAOCG00000016066	lsg1	98	80.000	ENSPMEG00000017281	lsg1	100	79.251	Poecilia_mexicana
ENSAOCG00000016066	lsg1	98	67.823	ENSPREG00000006048	lsg1	100	67.846	Poecilia_reticulata
ENSAOCG00000016066	lsg1	92	64.309	ENSPPYG00000014425	LSG1	100	63.487	Pongo_abelii
ENSAOCG00000016066	lsg1	89	70.667	ENSPCAG00000005511	LSG1	75	70.667	Procavia_capensis
ENSAOCG00000016066	lsg1	99	63.389	ENSPCOG00000012360	LSG1	99	62.935	Propithecus_coquereli
ENSAOCG00000016066	lsg1	100	81.135	ENSPNYG00000021994	lsg1	100	80.335	Pundamilia_nyererei
ENSAOCG00000016066	lsg1	100	75.311	ENSPNAG00000015533	lsg1	100	75.000	Pygocentrus_nattereri
ENSAOCG00000016066	lsg1	100	63.158	ENSRNOG00000001727	Lsg1	100	63.040	Rattus_norvegicus
ENSAOCG00000016066	lsg1	99	64.048	ENSRBIG00000029053	LSG1	99	63.581	Rhinopithecus_bieti
ENSAOCG00000016066	lsg1	99	64.048	ENSRROG00000037702	LSG1	99	63.581	Rhinopithecus_roxellana
ENSAOCG00000016066	lsg1	83	41.011	YGL099W	LSG1	69	53.977	Saccharomyces_cerevisiae
ENSAOCG00000016066	lsg1	99	64.697	ENSSBOG00000034938	LSG1	99	64.394	Saimiri_boliviensis_boliviensis
ENSAOCG00000016066	lsg1	77	61.450	ENSSHAG00000003487	LSG1	100	60.413	Sarcophilus_harrisii
ENSAOCG00000016066	lsg1	99	74.363	ENSSFOG00015008955	lsg1	100	73.676	Scleropages_formosus
ENSAOCG00000016066	lsg1	99	83.281	ENSSDUG00000004622	lsg1	100	81.889	Seriola_dumerili
ENSAOCG00000016066	lsg1	99	83.092	ENSSLDG00000010869	lsg1	100	81.073	Seriola_lalandi_dorsalis
ENSAOCG00000016066	lsg1	85	65.487	ENSSARG00000012981	LSG1	74	71.906	Sorex_araneus
ENSAOCG00000016066	lsg1	100	66.009	ENSSPUG00000016347	LSG1	100	65.303	Sphenodon_punctatus
ENSAOCG00000016066	lsg1	100	87.040	ENSSPAG00000005508	lsg1	100	88.160	Stegastes_partitus
ENSAOCG00000016066	lsg1	100	63.706	ENSSSCG00000011827	LSG1	100	63.400	Sus_scrofa
ENSAOCG00000016066	lsg1	89	61.386	ENSTGUG00000009068	LSG1	100	61.194	Taeniopygia_guttata
ENSAOCG00000016066	lsg1	98	74.204	ENSTRUG00000017380	lsg1	100	73.913	Takifugu_rubripes
ENSAOCG00000016066	lsg1	98	79.487	ENSTNIG00000015570	lsg1	100	78.906	Tetraodon_nigroviridis
ENSAOCG00000016066	lsg1	90	66.542	ENSTTRG00000000559	LSG1	91	65.556	Tursiops_truncatus
ENSAOCG00000016066	lsg1	100	63.801	ENSUAMG00000012454	LSG1	100	62.840	Ursus_americanus
ENSAOCG00000016066	lsg1	100	63.801	ENSUMAG00000000855	LSG1	100	62.840	Ursus_maritimus
ENSAOCG00000016066	lsg1	95	62.102	ENSVPAG00000012400	LSG1	100	60.510	Vicugna_pacos
ENSAOCG00000016066	lsg1	97	64.531	ENSVVUG00000008956	LSG1	99	63.380	Vulpes_vulpes
ENSAOCG00000016066	lsg1	100	67.180	ENSXETG00000003451	lsg1	100	66.772	Xenopus_tropicalis
ENSAOCG00000016066	lsg1	98	79.839	ENSXCOG00000003239	lsg1	100	78.571	Xiphophorus_couchianus
ENSAOCG00000016066	lsg1	98	77.900	ENSXMAG00000005536	lsg1	100	77.341	Xiphophorus_maculatus