EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAOCG00000016469 (Gene tree)
Gene ID: 111574100
Gene Symbol: sfswap
Alias: sfrs8|srsf8|zgc:56184
Full Name: splicing factor SWAP
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Minus strand
Length: 129036 bases
Position: chrNXFZ01002956.1:64001-193036
Accession: 111574100
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000012067	DRY_EERY	PF09750.9	1.3e-31	1	1
ENSAOCP00000027520	DRY_EERY	PF09750.9	7.1e-12	1	1
ENSAOCP00000027520	Surp	PF01805.20	6.8e-28	1	2
ENSAOCP00000027520	Surp	PF01805.20	6.8e-28	2	2
ENSAOCP00000012067	Surp	PF01805.20	7.1e-28	1	2
ENSAOCP00000012067	Surp	PF01805.20	7.1e-28	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000019657	-	3957	XM_023278522	ENSAOCP00000012067	951 (aa)	XP_023134290	UPI000C312857
ENSAOCT00000019743	-	3798	XM_023278523	ENSAOCP00000027520	932 (aa)	XP_023134291	UPI000C30E44E

Gene Model

Click here to download ENSAOCG00000016469's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000016469's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000016469	sfswap	66	60.526	ENSG00000061936	SFSWAP	68	79.268	Homo_sapiens
ENSAOCG00000016469	sfswap	100	100.000	ENSAPOG00000005784	sfswap	99	95.798	Acanthochromis_polyacanthus
ENSAOCG00000016469	sfswap	66	59.357	ENSAMEG00000013818	SFSWAP	70	59.912	Ailuropoda_melanoleuca
ENSAOCG00000016469	sfswap	100	99.264	ENSAPEG00000004965	sfswap	100	99.264	Amphiprion_percula
ENSAOCG00000016469	sfswap	77	83.941	ENSATEG00000021053	sfswap	79	84.044	Anabas_testudineus
ENSAOCG00000016469	sfswap	81	58.371	ENSACAG00000007220	SFSWAP	72	57.057	Anolis_carolinensis
ENSAOCG00000016469	sfswap	68	58.333	ENSANAG00000001518	SFSWAP	71	59.084	Aotus_nancymaae
ENSAOCG00000016469	sfswap	75	86.408	ENSACLG00000020159	sfswap	100	85.146	Astatotilapia_calliptera
ENSAOCG00000016469	sfswap	70	67.832	ENSAMXG00000008657	sfswap	72	68.583	Astyanax_mexicanus
ENSAOCG00000016469	sfswap	86	58.978	ENSBTAG00000000439	SFSWAP	76	59.915	Bos_taurus
ENSAOCG00000016469	sfswap	97	51.655	ENSCJAG00000003613	SFSWAP	73	59.621	Callithrix_jacchus
ENSAOCG00000016469	sfswap	84	61.414	ENSCAFG00000006625	SFSWAP	70	60.499	Canis_familiaris
ENSAOCG00000016469	sfswap	58	53.539	ENSCAFG00020011254	SFSWAP	66	54.645	Canis_lupus_dingo
ENSAOCG00000016469	sfswap	62	69.003	ENSCHIG00000008838	SFSWAP	71	58.934	Capra_hircus
ENSAOCG00000016469	sfswap	63	68.293	ENSTSYG00000010303	SFSWAP	74	57.634	Carlito_syrichta
ENSAOCG00000016469	sfswap	89	64.773	ENSCAPG00000004394	SFSWAP	70	58.921	Cavia_aperea
ENSAOCG00000016469	sfswap	89	68.378	ENSCPOG00000005280	SFSWAP	70	61.404	Cavia_porcellus
ENSAOCG00000016469	sfswap	61	68.108	ENSCCAG00000037255	SFSWAP	71	60.029	Cebus_capucinus
ENSAOCG00000016469	sfswap	59	67.838	ENSCATG00000031094	SFSWAP	70	59.416	Cercocebus_atys
ENSAOCG00000016469	sfswap	97	52.870	ENSCLAG00000008380	SFSWAP	71	59.371	Chinchilla_lanigera
ENSAOCG00000016469	sfswap	59	67.380	ENSCSAG00000001884	SFSWAP	70	59.416	Chlorocebus_sabaeus
ENSAOCG00000016469	sfswap	64	66.981	ENSCHOG00000003578	SFSWAP	64	62.306	Choloepus_hoffmanni
ENSAOCG00000016469	sfswap	69	60.511	ENSCPBG00000024757	SFSWAP	70	58.392	Chrysemys_picta_bellii
ENSAOCG00000016469	sfswap	59	67.568	ENSCANG00000036501	SFSWAP	70	59.270	Colobus_angolensis_palliatus
ENSAOCG00000016469	sfswap	63	64.631	ENSCGRG00001011284	Sfswap	71	59.571	Cricetulus_griseus_chok1gshd
ENSAOCG00000016469	sfswap	63	64.467	ENSCGRG00000017417	Sfswap	71	59.571	Cricetulus_griseus_crigri
ENSAOCG00000016469	sfswap	77	76.383	ENSCSEG00000003773	sfswap	97	73.870	Cynoglossus_semilaevis
ENSAOCG00000016469	sfswap	60	71.300	ENSCVAG00000001205	-	70	70.112	Cyprinodon_variegatus
ENSAOCG00000016469	sfswap	71	70.014	ENSDARG00000005980	sfswap	73	69.058	Danio_rerio
ENSAOCG00000016469	sfswap	97	50.581	ENSDNOG00000018742	SFSWAP	70	59.889	Dasypus_novemcinctus
ENSAOCG00000016469	sfswap	68	52.601	ENSDORG00000010352	Sfswap	72	52.975	Dipodomys_ordii
ENSAOCG00000016469	sfswap	85	34.244	ENSEBUG00000016748	SFSWAP	75	38.793	Eptatretus_burgeri
ENSAOCG00000016469	sfswap	68	60.429	ENSEASG00005016502	SFSWAP	71	58.381	Equus_asinus_asinus
ENSAOCG00000016469	sfswap	68	60.429	ENSECAG00000007657	SFSWAP	72	58.381	Equus_caballus
ENSAOCG00000016469	sfswap	84	49.046	ENSEEUG00000001713	SFSWAP	59	70.370	Erinaceus_europaeus
ENSAOCG00000016469	sfswap	70	68.237	ENSELUG00000010942	sfswap	94	65.333	Esox_lucius
ENSAOCG00000016469	sfswap	97	51.867	ENSFCAG00000010778	SFSWAP	70	60.673	Felis_catus
ENSAOCG00000016469	sfswap	67	58.060	ENSFALG00000009577	SFSWAP	72	57.729	Ficedula_albicollis
ENSAOCG00000016469	sfswap	89	68.464	ENSFDAG00000017235	SFSWAP	71	59.486	Fukomys_damarensis
ENSAOCG00000016469	sfswap	77	81.114	ENSGAFG00000006272	sfswap	79	81.466	Gambusia_affinis
ENSAOCG00000016469	sfswap	83	71.137	ENSGACG00000017647	sfswap	92	71.574	Gasterosteus_aculeatus
ENSAOCG00000016469	sfswap	69	58.097	ENSGAGG00000002611	SFSWAP	70	58.708	Gopherus_agassizii
ENSAOCG00000016469	sfswap	59	68.733	ENSGGOG00000014877	SFSWAP	70	59.562	Gorilla_gorilla
ENSAOCG00000016469	sfswap	75	86.269	ENSHBUG00000005629	sfswap	78	86.269	Haplochromis_burtoni
ENSAOCG00000016469	sfswap	89	67.385	ENSHGLG00000019216	SFSWAP	73	57.300	Heterocephalus_glaber_female
ENSAOCG00000016469	sfswap	89	67.568	ENSHGLG00100019350	SFSWAP	71	58.890	Heterocephalus_glaber_male
ENSAOCG00000016469	sfswap	100	71.340	ENSHCOG00000009475	sfswap	77	74.658	Hippocampus_comes
ENSAOCG00000016469	sfswap	85	71.387	ENSIPUG00000010598	sfswap	78	68.990	Ictalurus_punctatus
ENSAOCG00000016469	sfswap	59	68.182	ENSSTOG00000000773	SFSWAP	70	59.738	Ictidomys_tridecemlineatus
ENSAOCG00000016469	sfswap	63	68.649	ENSJJAG00000006609	Sfswap	72	59.687	Jaculus_jaculus
ENSAOCG00000016469	sfswap	75	81.843	ENSKMAG00000013168	sfswap	75	82.393	Kryptolebias_marmoratus
ENSAOCG00000016469	sfswap	72	82.521	ENSLBEG00000010239	sfswap	77	82.235	Labrus_bergylta
ENSAOCG00000016469	sfswap	68	58.429	ENSLACG00000018678	SFSWAP	71	56.028	Latimeria_chalumnae
ENSAOCG00000016469	sfswap	85	68.788	ENSLAFG00000014462	SFSWAP	72	59.476	Loxodonta_africana
ENSAOCG00000016469	sfswap	97	49.663	ENSMFAG00000037352	SFSWAP	67	59.416	Macaca_fascicularis
ENSAOCG00000016469	sfswap	97	52.108	ENSMMUG00000020343	SFSWAP	70	58.986	Macaca_mulatta
ENSAOCG00000016469	sfswap	97	52.108	ENSMNEG00000041002	SFSWAP	70	58.986	Macaca_nemestrina
ENSAOCG00000016469	sfswap	66	58.529	ENSMLEG00000035728	SFSWAP	70	57.478	Mandrillus_leucophaeus
ENSAOCG00000016469	sfswap	100	82.744	ENSMAMG00000006631	sfswap	100	82.017	Mastacembelus_armatus
ENSAOCG00000016469	sfswap	75	86.408	ENSMZEG00005017834	SFSWAP	99	83.526	Maylandia_zebra
ENSAOCG00000016469	sfswap	60	68.194	ENSMICG00000004465	SFSWAP	70	60.380	Microcebus_murinus
ENSAOCG00000016469	sfswap	64	65.736	ENSMOCG00000014390	Sfswap	71	60.286	Microtus_ochrogaster
ENSAOCG00000016469	sfswap	69	65.132	ENSMODG00000015581	SFSWAP	67	52.838	Monodelphis_domestica
ENSAOCG00000016469	sfswap	89	68.835	MGP_CAROLIEiJ_G0027780	Sfswap	67	77.778	Mus_caroli
ENSAOCG00000016469	sfswap	97	49.142	ENSMUSG00000029439	Sfswap	67	77.778	Mus_musculus
ENSAOCG00000016469	sfswap	99	48.323	MGP_PahariEiJ_G0024360	Sfswap	67	77.778	Mus_pahari
ENSAOCG00000016469	sfswap	97	50.858	MGP_SPRETEiJ_G0028779	Sfswap	67	77.778	Mus_spretus
ENSAOCG00000016469	sfswap	97	50.872	ENSMPUG00000002218	SFSWAP	72	59.379	Mustela_putorius_furo
ENSAOCG00000016469	sfswap	68	60.000	ENSMLUG00000011296	SFSWAP	74	59.883	Myotis_lucifugus
ENSAOCG00000016469	sfswap	71	59.085	ENSNGAG00000018167	Sfswap	76	57.067	Nannospalax_galili
ENSAOCG00000016469	sfswap	71	84.708	ENSNBRG00000020857	sfswap	100	83.942	Neolamprologus_brichardi
ENSAOCG00000016469	sfswap	68	57.576	ENSNLEG00000008386	SFSWAP	71	59.825	Nomascus_leucogenys
ENSAOCG00000016469	sfswap	61	67.120	ENSOPRG00000006983	-	58	60.000	Ochotona_princeps
ENSAOCG00000016469	sfswap	88	78.610	ENSONIG00000003757	sfswap	100	82.463	Oreochromis_niloticus
ENSAOCG00000016469	sfswap	72	69.207	ENSOANG00000013861	SFSWAP	72	59.385	Ornithorhynchus_anatinus
ENSAOCG00000016469	sfswap	61	64.721	ENSOCUG00000002165	SFSWAP	72	58.659	Oryctolagus_cuniculus
ENSAOCG00000016469	sfswap	75	79.696	ENSORLG00000010983	sfswap	77	80.110	Oryzias_latipes
ENSAOCG00000016469	sfswap	75	79.834	ENSORLG00020010779	sfswap	77	80.249	Oryzias_latipes_hni
ENSAOCG00000016469	sfswap	75	79.586	ENSORLG00015023093	sfswap	77	80.000	Oryzias_latipes_hsok
ENSAOCG00000016469	sfswap	75	80.753	ENSOMEG00000022065	sfswap	93	77.053	Oryzias_melastigma
ENSAOCG00000016469	sfswap	80	68.464	ENSOGAG00000016724	SFSWAP	78	59.270	Otolemur_garnettii
ENSAOCG00000016469	sfswap	78	69.003	ENSOARG00000014314	SFSWAP	71	60.438	Ovis_aries
ENSAOCG00000016469	sfswap	59	68.733	ENSPPAG00000036706	SFSWAP	72	59.562	Pan_paniscus
ENSAOCG00000016469	sfswap	97	50.778	ENSPPRG00000017318	SFSWAP	68	59.402	Panthera_pardus
ENSAOCG00000016469	sfswap	96	49.536	ENSPTIG00000004304	SFSWAP	69	66.393	Panthera_tigris_altaica
ENSAOCG00000016469	sfswap	97	52.294	ENSPTRG00000005640	SFSWAP	73	59.562	Pan_troglodytes
ENSAOCG00000016469	sfswap	59	67.838	ENSPANG00000019737	SFSWAP	70	59.416	Papio_anubis
ENSAOCG00000016469	sfswap	73	66.069	ENSPKIG00000008327	sfswap	77	67.213	Paramormyrops_kingsleyae
ENSAOCG00000016469	sfswap	64	65.306	ENSPEMG00000001237	Sfswap	74	58.621	Peromyscus_maniculatus_bairdii
ENSAOCG00000016469	sfswap	69	70.679	ENSPCIG00000006062	SFSWAP	67	57.185	Phascolarctos_cinereus
ENSAOCG00000016469	sfswap	100	77.268	ENSPFOG00000019657	sfswap	77	81.492	Poecilia_formosa
ENSAOCG00000016469	sfswap	77	81.191	ENSPLAG00000008513	sfswap	77	81.630	Poecilia_latipinna
ENSAOCG00000016469	sfswap	77	81.275	ENSPMEG00000008716	sfswap	79	81.361	Poecilia_mexicana
ENSAOCG00000016469	sfswap	77	80.785	ENSPREG00000006692	sfswap	77	81.215	Poecilia_reticulata
ENSAOCG00000016469	sfswap	89	68.464	ENSPPYG00000005129	SFSWAP	71	59.854	Pongo_abelii
ENSAOCG00000016469	sfswap	60	68.194	ENSPCOG00000023786	SFSWAP	70	60.350	Propithecus_coquereli
ENSAOCG00000016469	sfswap	52	93.617	ENSPVAG00000014918	SFSWAP	56	93.617	Pteropus_vampyrus
ENSAOCG00000016469	sfswap	75	86.288	ENSPNYG00000012660	sfswap	74	84.765	Pundamilia_nyererei
ENSAOCG00000016469	sfswap	70	67.080	ENSPNAG00000007073	sfswap	73	70.141	Pygocentrus_nattereri
ENSAOCG00000016469	sfswap	59	68.835	ENSRNOG00000000931	Sfswap	98	47.083	Rattus_norvegicus
ENSAOCG00000016469	sfswap	90	68.464	ENSSBOG00000026217	SFSWAP	72	59.915	Saimiri_boliviensis_boliviensis
ENSAOCG00000016469	sfswap	80	57.319	ENSSHAG00000014232	SFSWAP	72	58.931	Sarcophilus_harrisii
ENSAOCG00000016469	sfswap	66	69.512	ENSSFOG00015000766	sfswap	70	70.669	Scleropages_formosus
ENSAOCG00000016469	sfswap	75	81.122	ENSSMAG00000018718	sfswap	76	81.259	Scophthalmus_maximus
ENSAOCG00000016469	sfswap	77	87.686	ENSSDUG00000021680	sfswap	75	87.772	Seriola_dumerili
ENSAOCG00000016469	sfswap	77	87.686	ENSSLDG00000010835	sfswap	75	87.772	Seriola_lalandi_dorsalis
ENSAOCG00000016469	sfswap	71	71.429	ENSSARG00000000424	SFSWAP	74	60.458	Sorex_araneus
ENSAOCG00000016469	sfswap	59	55.907	ENSSPUG00000010272	SFSWAP	70	54.812	Sphenodon_punctatus
ENSAOCG00000016469	sfswap	75	93.445	ENSSPAG00000014310	sfswap	75	93.333	Stegastes_partitus
ENSAOCG00000016469	sfswap	83	60.770	ENSSSCG00000009744	SFSWAP	72	59.007	Sus_scrofa
ENSAOCG00000016469	sfswap	70	57.836	ENSTGUG00000004623	SFSWAP	75	59.147	Taeniopygia_guttata
ENSAOCG00000016469	sfswap	72	68.464	ENSTTRG00000013478	SFSWAP	70	55.313	Tursiops_truncatus
ENSAOCG00000016469	sfswap	97	49.543	ENSUAMG00000016807	SFSWAP	72	58.616	Ursus_americanus
ENSAOCG00000016469	sfswap	83	69.452	ENSUMAG00000002957	SFSWAP	74	56.799	Ursus_maritimus
ENSAOCG00000016469	sfswap	66	60.088	ENSVVUG00000010753	SFSWAP	70	60.499	Vulpes_vulpes
ENSAOCG00000016469	sfswap	84	57.948	ENSXETG00000009350	sfswap	88	59.854	Xenopus_tropicalis
ENSAOCG00000016469	sfswap	77	81.497	ENSXMAG00000009020	sfswap	79	81.583	Xiphophorus_maculatus