EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAOCG00000016581 (Gene tree)
Gene ID: 111583430
Gene Symbol: si:ch73-63e15.2
Alias: si:dkey-19f23.4
Full Name: strawberry notch homolog 2
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Minus strand
Length: 64431 bases
Position: chrNXFZ01004086.1:36720-101150
Accession: 111583430
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000027503	ResIII	PF04851.15	3.1e-07	1	1
ENSAOCP00000027511	ResIII	PF04851.15	3.3e-07	1	1
ENSAOCP00000012100	ResIII	PF04851.15	3.4e-07	1	1
ENSAOCP00000012118	ResIII	PF04851.15	3.6e-07	1	1
ENSAOCP00000012052	ResIII	PF04851.15	2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000019726	-	8572	XM_023292524	ENSAOCP00000012118	1589 (aa)	XP_023148292	UPI000C30ED82
ENSAOCT00000019685	-	8285	XM_023292527	ENSAOCP00000027511	1533 (aa)	XP_023148295	-
ENSAOCT00000019674	-	8382	XM_023292529	ENSAOCP00000027503	1502 (aa)	XP_023148297	-
ENSAOCT00000030498	-	3027	-	ENSAOCP00000012052	1008 (aa)	-	-
ENSAOCT00000019709	-	8488	XM_023292526	ENSAOCP00000012100	1561 (aa)	XP_023148294	UPI000C30FC85

Gene Model

Click here to download ENSAOCG00000016581's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000016581's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAOCG00000016581	si:ch73-63e15.2	75	63.039	ENSAOCG00000014859	sbno1	68	64.399

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000016581	si:ch73-63e15.2	95	68.902	ENSG00000064932	SBNO2	88	68.547	Homo_sapiens
ENSAOCG00000016581	si:ch73-63e15.2	100	96.185	ENSAPOG00000003185	si:ch73-63e15.2	100	96.185	Acanthochromis_polyacanthus
ENSAOCG00000016581	si:ch73-63e15.2	100	99.811	ENSAPEG00000008862	si:ch73-63e15.2	100	99.811	Amphiprion_percula
ENSAOCG00000016581	si:ch73-63e15.2	99	88.538	ENSATEG00000023838	si:ch73-63e15.2	99	88.625	Anabas_testudineus
ENSAOCG00000016581	si:ch73-63e15.2	93	73.375	ENSAPLG00000007158	SBNO2	89	73.183	Anas_platyrhynchos
ENSAOCG00000016581	si:ch73-63e15.2	93	70.270	ENSANAG00000026685	SBNO2	89	68.034	Aotus_nancymaae
ENSAOCG00000016581	si:ch73-63e15.2	99	83.211	ENSACLG00000005090	si:ch73-63e15.2	100	82.078	Astatotilapia_calliptera
ENSAOCG00000016581	si:ch73-63e15.2	97	79.536	ENSAMXG00000015881	si:ch73-63e15.2	86	81.481	Astyanax_mexicanus
ENSAOCG00000016581	si:ch73-63e15.2	98	78.890	ENSAMXG00000018868	sbno2a	99	78.890	Astyanax_mexicanus
ENSAOCG00000016581	si:ch73-63e15.2	93	71.058	ENSBTAG00000020780	SBNO2	88	69.658	Bos_taurus
ENSAOCG00000016581	si:ch73-63e15.2	93	71.132	ENSCAFG00000019543	SBNO2	90	66.454	Canis_familiaris
ENSAOCG00000016581	si:ch73-63e15.2	93	71.132	ENSCAFG00020017115	SBNO2	95	66.454	Canis_lupus_dingo
ENSAOCG00000016581	si:ch73-63e15.2	93	70.954	ENSCHIG00000026127	SBNO2	90	66.508	Capra_hircus
ENSAOCG00000016581	si:ch73-63e15.2	93	69.813	ENSCAPG00000005731	SBNO2	94	67.452	Cavia_aperea
ENSAOCG00000016581	si:ch73-63e15.2	93	69.813	ENSCPOG00000007477	SBNO2	87	66.923	Cavia_porcellus
ENSAOCG00000016581	si:ch73-63e15.2	93	70.478	ENSCCAG00000037518	SBNO2	89	68.034	Cebus_capucinus
ENSAOCG00000016581	si:ch73-63e15.2	93	70.405	ENSCATG00000037046	SBNO2	88	68.718	Cercocebus_atys
ENSAOCG00000016581	si:ch73-63e15.2	93	70.545	ENSCLAG00000010178	SBNO2	99	69.352	Chinchilla_lanigera
ENSAOCG00000016581	si:ch73-63e15.2	93	70.301	ENSCSAG00000012317	SBNO2	90	65.630	Chlorocebus_sabaeus
ENSAOCG00000016581	si:ch73-63e15.2	93	73.745	ENSCPBG00000008920	SBNO2	79	83.603	Chrysemys_picta_bellii
ENSAOCG00000016581	si:ch73-63e15.2	93	69.835	ENSCANG00000036745	SBNO2	96	68.510	Colobus_angolensis_palliatus
ENSAOCG00000016581	si:ch73-63e15.2	90	70.323	ENSCGRG00001023960	Sbno2	85	67.647	Cricetulus_griseus_chok1gshd
ENSAOCG00000016581	si:ch73-63e15.2	93	70.270	ENSCGRG00000011984	Sbno2	85	69.037	Cricetulus_griseus_crigri
ENSAOCG00000016581	si:ch73-63e15.2	94	88.725	ENSCSEG00000006856	si:ch73-63e15.2	97	91.757	Cynoglossus_semilaevis
ENSAOCG00000016581	si:ch73-63e15.2	94	87.723	ENSCVAG00000005663	si:ch73-63e15.2	89	82.855	Cyprinodon_variegatus
ENSAOCG00000016581	si:ch73-63e15.2	94	80.882	ENSDARG00000016188	SBNO2	99	79.868	Danio_rerio
ENSAOCG00000016581	si:ch73-63e15.2	98	74.450	ENSDARG00000098801	sbno2a	94	76.561	Danio_rerio
ENSAOCG00000016581	si:ch73-63e15.2	93	70.760	ENSDORG00000002916	Sbno2	88	67.795	Dipodomys_ordii
ENSAOCG00000016581	si:ch73-63e15.2	95	69.340	ENSEASG00005021621	SBNO2	89	69.547	Equus_asinus_asinus
ENSAOCG00000016581	si:ch73-63e15.2	95	69.340	ENSECAG00000011827	SBNO2	89	69.632	Equus_caballus
ENSAOCG00000016581	si:ch73-63e15.2	93	88.547	ENSELUG00000020457	si:ch73-63e15.2	84	86.811	Esox_lucius
ENSAOCG00000016581	si:ch73-63e15.2	93	73.140	ENSFALG00000013988	SBNO2	92	68.711	Ficedula_albicollis
ENSAOCG00000016581	si:ch73-63e15.2	93	67.638	ENSFDAG00000015186	SBNO2	87	66.638	Fukomys_damarensis
ENSAOCG00000016581	si:ch73-63e15.2	94	88.703	ENSFHEG00000022262	si:ch73-63e15.2	63	89.331	Fundulus_heteroclitus
ENSAOCG00000016581	si:ch73-63e15.2	93	86.929	ENSGMOG00000007542	si:ch73-63e15.2	96	88.996	Gadus_morhua
ENSAOCG00000016581	si:ch73-63e15.2	93	73.065	ENSGALG00000037522	SBNO2	86	72.559	Gallus_gallus
ENSAOCG00000016581	si:ch73-63e15.2	98	86.399	ENSGAFG00000004860	si:ch73-63e15.2	93	91.511	Gambusia_affinis
ENSAOCG00000016581	si:ch73-63e15.2	93	88.377	ENSGACG00000013190	si:ch73-63e15.2	95	92.522	Gasterosteus_aculeatus
ENSAOCG00000016581	si:ch73-63e15.2	93	73.994	ENSGAGG00000008348	SBNO2	90	70.688	Gopherus_agassizii
ENSAOCG00000016581	si:ch73-63e15.2	93	89.278	ENSHBUG00000010742	si:ch73-63e15.2	100	82.711	Haplochromis_burtoni
ENSAOCG00000016581	si:ch73-63e15.2	93	70.239	ENSHGLG00000008739	SBNO2	85	68.966	Heterocephalus_glaber_female
ENSAOCG00000016581	si:ch73-63e15.2	93	70.239	ENSHGLG00100005269	SBNO2	99	69.191	Heterocephalus_glaber_male
ENSAOCG00000016581	si:ch73-63e15.2	98	84.878	ENSHCOG00000000884	si:ch73-63e15.2	96	85.503	Hippocampus_comes
ENSAOCG00000016581	si:ch73-63e15.2	99	78.895	ENSIPUG00000019672	sbno2	99	78.895	Ictalurus_punctatus
ENSAOCG00000016581	si:ch73-63e15.2	93	81.230	ENSIPUG00000000537	si:ch73-63e15.2	86	80.558	Ictalurus_punctatus
ENSAOCG00000016581	si:ch73-63e15.2	93	70.343	ENSSTOG00000025832	SBNO2	90	66.426	Ictidomys_tridecemlineatus
ENSAOCG00000016581	si:ch73-63e15.2	93	66.805	ENSJJAG00000017397	Sbno2	91	63.042	Jaculus_jaculus
ENSAOCG00000016581	si:ch73-63e15.2	94	88.772	ENSKMAG00000005541	si:ch73-63e15.2	100	81.503	Kryptolebias_marmoratus
ENSAOCG00000016581	si:ch73-63e15.2	63	81.448	ENSLBEG00000005937	-	100	85.628	Labrus_bergylta
ENSAOCG00000016581	si:ch73-63e15.2	99	88.690	ENSLBEG00000025016	si:ch73-63e15.2	99	94.048	Labrus_bergylta
ENSAOCG00000016581	si:ch73-63e15.2	67	66.858	ENSLACG00000012598	SBNO2	100	70.806	Latimeria_chalumnae
ENSAOCG00000016581	si:ch73-63e15.2	94	84.848	ENSLOCG00000004643	si:ch73-63e15.2	90	85.349	Lepisosteus_oculatus
ENSAOCG00000016581	si:ch73-63e15.2	92	69.620	ENSLAFG00000008824	SBNO2	89	65.905	Loxodonta_africana
ENSAOCG00000016581	si:ch73-63e15.2	93	68.465	ENSMFAG00000040030	SBNO2	90	67.378	Macaca_fascicularis
ENSAOCG00000016581	si:ch73-63e15.2	93	70.301	ENSMMUG00000010886	SBNO2	90	65.630	Macaca_mulatta
ENSAOCG00000016581	si:ch73-63e15.2	93	70.301	ENSMNEG00000039927	SBNO2	88	68.974	Macaca_nemestrina
ENSAOCG00000016581	si:ch73-63e15.2	93	70.301	ENSMLEG00000038556	SBNO2	97	65.979	Mandrillus_leucophaeus
ENSAOCG00000016581	si:ch73-63e15.2	100	85.761	ENSMAMG00000018758	si:ch73-63e15.2	100	85.955	Mastacembelus_armatus
ENSAOCG00000016581	si:ch73-63e15.2	99	83.333	ENSMZEG00005010682	si:ch73-63e15.2	100	82.067	Maylandia_zebra
ENSAOCG00000016581	si:ch73-63e15.2	93	72.559	ENSMGAG00000003801	SBNO2	90	72.681	Meleagris_gallopavo
ENSAOCG00000016581	si:ch73-63e15.2	93	70.447	ENSMAUG00000008034	Sbno2	91	66.268	Mesocricetus_auratus
ENSAOCG00000016581	si:ch73-63e15.2	93	70.135	ENSMICG00000013071	SBNO2	88	68.977	Microcebus_murinus
ENSAOCG00000016581	si:ch73-63e15.2	93	70.424	ENSMOCG00000010504	Sbno2	85	69.344	Microtus_ochrogaster
ENSAOCG00000016581	si:ch73-63e15.2	93	72.690	ENSMODG00000005382	SBNO2	89	67.829	Monodelphis_domestica
ENSAOCG00000016581	si:ch73-63e15.2	99	82.766	ENSMALG00000021831	si:ch73-63e15.2	99	86.111	Monopterus_albus
ENSAOCG00000016581	si:ch73-63e15.2	93	69.927	ENSMUSG00000035673	Sbno2	97	66.667	Mus_musculus
ENSAOCG00000016581	si:ch73-63e15.2	93	69.854	MGP_PahariEiJ_G0030976	Sbno2	88	66.557	Mus_pahari
ENSAOCG00000016581	si:ch73-63e15.2	93	69.958	MGP_SPRETEiJ_G0016381	Sbno2	94	66.748	Mus_spretus
ENSAOCG00000016581	si:ch73-63e15.2	93	71.028	ENSMPUG00000008747	SBNO2	91	71.844	Mustela_putorius_furo
ENSAOCG00000016581	si:ch73-63e15.2	93	69.990	ENSNGAG00000004308	Sbno2	86	69.070	Nannospalax_galili
ENSAOCG00000016581	si:ch73-63e15.2	98	89.815	ENSNBRG00000022968	si:ch73-63e15.2	99	91.238	Neolamprologus_brichardi
ENSAOCG00000016581	si:ch73-63e15.2	89	79.399	ENSNLEG00000001305	SBNO2	89	70.449	Nomascus_leucogenys
ENSAOCG00000016581	si:ch73-63e15.2	75	68.462	ENSMEUG00000013511	-	78	67.550	Notamacropus_eugenii
ENSAOCG00000016581	si:ch73-63e15.2	93	70.135	ENSOPRG00000017238	SBNO2	94	69.014	Ochotona_princeps
ENSAOCG00000016581	si:ch73-63e15.2	93	68.672	ENSODEG00000011822	SBNO2	86	67.842	Octodon_degus
ENSAOCG00000016581	si:ch73-63e15.2	100	83.410	ENSONIG00000002490	si:ch73-63e15.2	99	90.160	Oreochromis_niloticus
ENSAOCG00000016581	si:ch73-63e15.2	95	87.037	ENSORLG00000000913	si:ch73-63e15.2	100	80.184	Oryzias_latipes
ENSAOCG00000016581	si:ch73-63e15.2	95	87.037	ENSORLG00020010978	si:ch73-63e15.2	100	80.184	Oryzias_latipes_hni
ENSAOCG00000016581	si:ch73-63e15.2	95	86.934	ENSORLG00015000202	si:ch73-63e15.2	100	80.184	Oryzias_latipes_hsok
ENSAOCG00000016581	si:ch73-63e15.2	98	82.860	ENSOMEG00000000359	si:ch73-63e15.2	100	79.987	Oryzias_melastigma
ENSAOCG00000016581	si:ch73-63e15.2	93	69.159	ENSOARG00000011130	SBNO2	86	67.303	Ovis_aries
ENSAOCG00000016581	si:ch73-63e15.2	95	68.801	ENSPPAG00000032482	SBNO2	90	68.272	Pan_paniscus
ENSAOCG00000016581	si:ch73-63e15.2	95	68.902	ENSPTRG00000010185	SBNO2	89	68.403	Pan_troglodytes
ENSAOCG00000016581	si:ch73-63e15.2	93	66.251	ENSPANG00000009658	SBNO2	88	65.299	Papio_anubis
ENSAOCG00000016581	si:ch73-63e15.2	98	73.195	ENSPKIG00000009707	-	84	80.118	Paramormyrops_kingsleyae
ENSAOCG00000016581	si:ch73-63e15.2	94	83.298	ENSPKIG00000024201	si:ch73-63e15.2	85	84.116	Paramormyrops_kingsleyae
ENSAOCG00000016581	si:ch73-63e15.2	93	72.709	ENSPSIG00000002852	SBNO2	99	73.834	Pelodiscus_sinensis
ENSAOCG00000016581	si:ch73-63e15.2	98	85.471	ENSPMGG00000014375	si:ch73-63e15.2	96	82.348	Periophthalmus_magnuspinnatus
ENSAOCG00000016581	si:ch73-63e15.2	93	67.779	ENSPEMG00000024122	Sbno2	88	65.643	Peromyscus_maniculatus_bairdii
ENSAOCG00000016581	si:ch73-63e15.2	91	72.814	ENSPCIG00000011264	SBNO2	89	68.222	Phascolarctos_cinereus
ENSAOCG00000016581	si:ch73-63e15.2	98	84.321	ENSPFOG00000004096	si:ch73-63e15.2	100	88.956	Poecilia_formosa
ENSAOCG00000016581	si:ch73-63e15.2	94	89.402	ENSPLAG00000014653	si:ch73-63e15.2	100	79.484	Poecilia_latipinna
ENSAOCG00000016581	si:ch73-63e15.2	99	86.713	ENSPMEG00000002129	si:ch73-63e15.2	97	86.614	Poecilia_mexicana
ENSAOCG00000016581	si:ch73-63e15.2	98	83.636	ENSPREG00000006755	si:ch73-63e15.2	100	79.327	Poecilia_reticulata
ENSAOCG00000016581	si:ch73-63e15.2	81	72.640	ENSPCAG00000012256	SBNO2	79	68.686	Procavia_capensis
ENSAOCG00000016581	si:ch73-63e15.2	93	63.202	ENSPCOG00000015216	SBNO2	88	62.884	Propithecus_coquereli
ENSAOCG00000016581	si:ch73-63e15.2	100	83.410	ENSPNYG00000019926	si:ch73-63e15.2	100	82.896	Pundamilia_nyererei
ENSAOCG00000016581	si:ch73-63e15.2	98	75.928	ENSPNAG00000026609	sbno2a	99	71.373	Pygocentrus_nattereri
ENSAOCG00000016581	si:ch73-63e15.2	93	83.263	ENSPNAG00000020260	si:ch73-63e15.2	86	82.561	Pygocentrus_nattereri
ENSAOCG00000016581	si:ch73-63e15.2	96	68.416	ENSRNOG00000013987	Sbno2	89	69.679	Rattus_norvegicus
ENSAOCG00000016581	si:ch73-63e15.2	93	68.465	ENSRBIG00000009740	SBNO2	87	67.037	Rhinopithecus_bieti
ENSAOCG00000016581	si:ch73-63e15.2	79	70.646	ENSRROG00000044671	SBNO2	86	70.644	Rhinopithecus_roxellana
ENSAOCG00000016581	si:ch73-63e15.2	93	70.166	ENSSBOG00000023562	SBNO2	89	67.949	Saimiri_boliviensis_boliviensis
ENSAOCG00000016581	si:ch73-63e15.2	96	70.783	ENSSHAG00000010241	SBNO2	99	71.009	Sarcophilus_harrisii
ENSAOCG00000016581	si:ch73-63e15.2	93	82.521	ENSSFOG00015005861	si:ch73-63e15.2	97	83.260	Scleropages_formosus
ENSAOCG00000016581	si:ch73-63e15.2	100	88.454	ENSSMAG00000012489	si:ch73-63e15.2	100	88.577	Scophthalmus_maximus
ENSAOCG00000016581	si:ch73-63e15.2	100	88.466	ENSSDUG00000003527	si:ch73-63e15.2	100	88.713	Seriola_dumerili
ENSAOCG00000016581	si:ch73-63e15.2	100	88.347	ENSSLDG00000004623	si:ch73-63e15.2	100	88.469	Seriola_lalandi_dorsalis
ENSAOCG00000016581	si:ch73-63e15.2	100	93.228	ENSSPAG00000017717	si:ch73-63e15.2	100	93.289	Stegastes_partitus
ENSAOCG00000016581	si:ch73-63e15.2	96	69.425	ENSSSCG00000030042	SBNO2	90	69.290	Sus_scrofa
ENSAOCG00000016581	si:ch73-63e15.2	93	88.830	ENSTRUG00000018193	si:ch73-63e15.2	86	91.316	Takifugu_rubripes
ENSAOCG00000016581	si:ch73-63e15.2	51	93.217	ENSTNIG00000000856	si:ch73-63e15.2	99	94.220	Tetraodon_nigroviridis
ENSAOCG00000016581	si:ch73-63e15.2	93	71.369	ENSUAMG00000006568	SBNO2	93	71.940	Ursus_americanus
ENSAOCG00000016581	si:ch73-63e15.2	93	71.266	ENSVVUG00000022823	SBNO2	89	66.454	Vulpes_vulpes
ENSAOCG00000016581	si:ch73-63e15.2	82	75.152	ENSXETG00000021579	sbno2	91	75.556	Xenopus_tropicalis
ENSAOCG00000016581	si:ch73-63e15.2	99	84.478	ENSXCOG00000009209	si:ch73-63e15.2	94	90.397	Xiphophorus_couchianus
ENSAOCG00000016581	si:ch73-63e15.2	92	93.031	ENSXMAG00000012091	si:ch73-63e15.2	91	91.935	Xiphophorus_maculatus