EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAOCG00000016676 (Gene tree)
Gene ID: 111579313
Gene Symbol: casc3
Alias: -
Full Name: CASC3%2C exon junction complex subunit
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Minus strand
Length: 12491 bases
Position: chrNXFZ01003442.1:157117-169607
Accession: 111579313
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000012253	Btz	PF09405.10	1.9e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000030607	-	2368	XM_023286556	ENSAOCP00000012253	759 (aa)	XP_023142324	UPI000C305690

Gene Model

Click here to download ENSAOCG00000016676's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000016676's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000016676	casc3	76	51.485	ENSG00000108349	CASC3	83	52.751	Homo_sapiens
ENSAOCG00000016676	casc3	100	91.242	ENSAPOG00000008467	casc3	100	93.203	Acanthochromis_polyacanthus
ENSAOCG00000016676	casc3	75	52.632	ENSAMEG00000007764	CASC3	82	53.698	Ailuropoda_melanoleuca
ENSAOCG00000016676	casc3	77	82.831	ENSACIG00000000720	casc3	94	85.714	Amphilophus_citrinellus
ENSAOCG00000016676	casc3	100	98.682	ENSAPEG00000006787	casc3	100	98.682	Amphiprion_percula
ENSAOCG00000016676	casc3	100	77.030	ENSATEG00000017196	casc3	100	75.635	Anabas_testudineus
ENSAOCG00000016676	casc3	52	61.538	ENSANAG00000031954	-	84	63.462	Aotus_nancymaae
ENSAOCG00000016676	casc3	75	50.974	ENSANAG00000034820	-	70	59.916	Aotus_nancymaae
ENSAOCG00000016676	casc3	100	77.778	ENSACLG00000016198	casc3	100	76.843	Astatotilapia_calliptera
ENSAOCG00000016676	casc3	99	58.883	ENSAMXG00000032452	casc3	94	56.842	Astyanax_mexicanus
ENSAOCG00000016676	casc3	78	53.526	ENSBTAG00000006250	CASC3	84	53.722	Bos_taurus
ENSAOCG00000016676	casc3	76	51.266	ENSCJAG00000016032	CASC3	82	51.935	Callithrix_jacchus
ENSAOCG00000016676	casc3	77	52.475	ENSCAFG00020018882	CASC3	83	52.733	Canis_lupus_dingo
ENSAOCG00000016676	casc3	77	53.595	ENSCHIG00000006338	CASC3	75	53.698	Capra_hircus
ENSAOCG00000016676	casc3	69	52.475	ENSTSYG00000002975	CASC3	74	53.376	Carlito_syrichta
ENSAOCG00000016676	casc3	66	53.094	ENSCAPG00000010514	CASC3	73	68.085	Cavia_aperea
ENSAOCG00000016676	casc3	76	52.318	ENSCPOG00000015139	CASC3	83	53.846	Cavia_porcellus
ENSAOCG00000016676	casc3	76	52.475	ENSCATG00000033593	CASC3	83	53.376	Cercocebus_atys
ENSAOCG00000016676	casc3	77	53.094	ENSCLAG00000013730	CASC3	75	53.185	Chinchilla_lanigera
ENSAOCG00000016676	casc3	76	52.475	ENSCSAG00000002777	CASC3	83	53.376	Chlorocebus_sabaeus
ENSAOCG00000016676	casc3	76	52.805	ENSCANG00000008814	CASC3	83	53.055	Colobus_angolensis_palliatus
ENSAOCG00000016676	casc3	78	51.911	ENSCGRG00001014706	Casc3	75	52.733	Cricetulus_griseus_chok1gshd
ENSAOCG00000016676	casc3	78	51.911	ENSCGRG00000001952	Casc3	80	52.733	Cricetulus_griseus_crigri
ENSAOCG00000016676	casc3	100	69.095	ENSCSEG00000010047	casc3	100	68.090	Cynoglossus_semilaevis
ENSAOCG00000016676	casc3	100	70.795	ENSCVAG00000014935	casc3	100	70.649	Cyprinodon_variegatus
ENSAOCG00000016676	casc3	78	52.548	ENSDNOG00000017249	CASC3	80	53.896	Dasypus_novemcinctus
ENSAOCG00000016676	casc3	77	50.325	ENSETEG00000013720	CASC3	84	50.804	Echinops_telfairi
ENSAOCG00000016676	casc3	80	38.889	ENSEBUG00000010654	casc3	64	37.545	Eptatretus_burgeri
ENSAOCG00000016676	casc3	77	53.595	ENSEASG00005002909	CASC3	85	52.532	Equus_asinus_asinus
ENSAOCG00000016676	casc3	77	53.595	ENSECAG00000019947	CASC3	74	53.055	Equus_caballus
ENSAOCG00000016676	casc3	100	58.488	ENSELUG00000015093	casc3	100	55.966	Esox_lucius
ENSAOCG00000016676	casc3	77	52.303	ENSFCAG00000014998	CASC3	84	53.376	Felis_catus
ENSAOCG00000016676	casc3	74	48.598	ENSFALG00000000412	CASC3	80	51.703	Ficedula_albicollis
ENSAOCG00000016676	casc3	71	52.516	ENSFDAG00000020696	CASC3	81	51.923	Fukomys_damarensis
ENSAOCG00000016676	casc3	100	70.801	ENSFHEG00000015793	casc3	100	69.041	Fundulus_heteroclitus
ENSAOCG00000016676	casc3	69	53.361	ENSGALG00000031813	CASC3	79	54.808	Gallus_gallus
ENSAOCG00000016676	casc3	98	71.005	ENSGAFG00000017148	casc3	86	72.494	Gambusia_affinis
ENSAOCG00000016676	casc3	58	65.986	ENSGAGG00000008432	CASC3	75	68.657	Gopherus_agassizii
ENSAOCG00000016676	casc3	76	51.485	ENSGGOG00000005067	CASC3	74	52.751	Gorilla_gorilla
ENSAOCG00000016676	casc3	100	77.519	ENSHBUG00000013155	casc3	100	76.585	Haplochromis_burtoni
ENSAOCG00000016676	casc3	77	52.288	ENSHGLG00000012117	CASC3	85	51.429	Heterocephalus_glaber_female
ENSAOCG00000016676	casc3	69	52.288	ENSHGLG00100002268	CASC3	84	51.429	Heterocephalus_glaber_male
ENSAOCG00000016676	casc3	100	63.742	ENSHCOG00000002664	casc3	95	61.321	Hippocampus_comes
ENSAOCG00000016676	casc3	80	50.000	ENSSTOG00000006374	CASC3	75	53.055	Ictidomys_tridecemlineatus
ENSAOCG00000016676	casc3	76	52.063	ENSJJAG00000023525	Casc3	82	52.733	Jaculus_jaculus
ENSAOCG00000016676	casc3	92	73.705	ENSKMAG00000019507	casc3	99	71.946	Kryptolebias_marmoratus
ENSAOCG00000016676	casc3	96	70.513	ENSLBEG00000005435	casc3	100	72.044	Labrus_bergylta
ENSAOCG00000016676	casc3	71	67.857	ENSLOCG00000013518	casc3	67	65.939	Lepisosteus_oculatus
ENSAOCG00000016676	casc3	77	52.614	ENSLAFG00000000606	CASC3	75	52.733	Loxodonta_africana
ENSAOCG00000016676	casc3	76	52.475	ENSMFAG00000041496	CASC3	83	53.376	Macaca_fascicularis
ENSAOCG00000016676	casc3	76	52.475	ENSMMUG00000045187	CASC3	83	53.376	Macaca_mulatta
ENSAOCG00000016676	casc3	68	52.475	ENSMLEG00000029049	CASC3	80	53.376	Mandrillus_leucophaeus
ENSAOCG00000016676	casc3	96	73.740	ENSMAMG00000005235	casc3	96	73.077	Mastacembelus_armatus
ENSAOCG00000016676	casc3	100	77.778	ENSMZEG00005003815	casc3	100	76.843	Maylandia_zebra
ENSAOCG00000016676	casc3	78	53.205	ENSMOCG00000013644	Casc3	75	53.268	Microtus_ochrogaster
ENSAOCG00000016676	casc3	100	70.679	ENSMMOG00000014339	casc3	100	69.782	Mola_mola
ENSAOCG00000016676	casc3	60	98.969	ENSMALG00000019771	casc3	84	87.097	Monopterus_albus
ENSAOCG00000016676	casc3	61	62.712	MGP_CAROLIEiJ_G0017099	Casc3	75	54.045	Mus_caroli
ENSAOCG00000016676	casc3	61	62.147	ENSMUSG00000078676	Casc3	75	54.369	Mus_musculus
ENSAOCG00000016676	casc3	61	62.147	MGP_SPRETEiJ_G0017943	Casc3	75	54.369	Mus_spretus
ENSAOCG00000016676	casc3	80	50.440	ENSMPUG00000014903	CASC3	83	53.746	Mustela_putorius_furo
ENSAOCG00000016676	casc3	77	50.820	ENSMLUG00000010520	CASC3	83	51.623	Myotis_lucifugus
ENSAOCG00000016676	casc3	56	66.000	ENSNGAG00000023121	Casc3	75	52.581	Nannospalax_galili
ENSAOCG00000016676	casc3	76	52.318	ENSNLEG00000001598	CASC3	82	53.571	Nomascus_leucogenys
ENSAOCG00000016676	casc3	57	61.972	ENSMEUG00000015662	CASC3	62	59.394	Notamacropus_eugenii
ENSAOCG00000016676	casc3	100	77.022	ENSONIG00000009337	casc3	100	77.407	Oreochromis_niloticus
ENSAOCG00000016676	casc3	61	60.452	ENSOCUG00000002954	CASC3	75	52.903	Oryctolagus_cuniculus
ENSAOCG00000016676	casc3	100	66.102	ENSORLG00000023125	casc3	100	66.450	Oryzias_latipes
ENSAOCG00000016676	casc3	77	51.299	ENSOGAG00000034486	CASC3	83	52.077	Otolemur_garnettii
ENSAOCG00000016676	casc3	77	53.922	ENSOARG00000013239	CASC3	84	53.698	Ovis_aries
ENSAOCG00000016676	casc3	76	51.485	ENSPPAG00000035069	CASC3	83	52.751	Pan_paniscus
ENSAOCG00000016676	casc3	77	51.974	ENSPPRG00000023670	CASC3	84	53.055	Panthera_pardus
ENSAOCG00000016676	casc3	70	52.157	ENSPTIG00000010891	CASC3	75	52.733	Panthera_tigris_altaica
ENSAOCG00000016676	casc3	76	53.135	ENSPANG00000021708	CASC3	83	53.376	Papio_anubis
ENSAOCG00000016676	casc3	62	61.017	ENSPEMG00000009774	Casc3	75	52.922	Peromyscus_maniculatus_bairdii
ENSAOCG00000016676	casc3	72	53.289	ENSPCIG00000025678	CASC3	74	55.049	Phascolarctos_cinereus
ENSAOCG00000016676	casc3	99	68.750	ENSPFOG00000017632	casc3	87	80.887	Poecilia_formosa
ENSAOCG00000016676	casc3	100	70.865	ENSPLAG00000005268	casc3	100	72.173	Poecilia_latipinna
ENSAOCG00000016676	casc3	64	87.500	ENSPMEG00000010299	casc3	82	87.500	Poecilia_mexicana
ENSAOCG00000016676	casc3	62	89.130	ENSPREG00000011856	casc3	91	72.683	Poecilia_reticulata
ENSAOCG00000016676	casc3	69	51.974	ENSPPYG00000008467	CASC3	74	53.722	Pongo_abelii
ENSAOCG00000016676	casc3	77	52.145	ENSPVAG00000008556	CASC3	84	53.055	Pteropus_vampyrus
ENSAOCG00000016676	casc3	100	77.649	ENSPNYG00000011962	casc3	100	76.714	Pundamilia_nyererei
ENSAOCG00000016676	casc3	99	57.393	ENSPNAG00000015928	casc3	98	57.414	Pygocentrus_nattereri
ENSAOCG00000016676	casc3	61	61.582	ENSRNOG00000009716	Casc3	83	52.903	Rattus_norvegicus
ENSAOCG00000016676	casc3	76	52.475	ENSRBIG00000033289	CASC3	74	53.376	Rhinopithecus_bieti
ENSAOCG00000016676	casc3	76	52.475	ENSRROG00000022337	CASC3	83	53.376	Rhinopithecus_roxellana
ENSAOCG00000016676	casc3	69	51.948	ENSSBOG00000031406	CASC3	73	62.500	Saimiri_boliviensis_boliviensis
ENSAOCG00000016676	casc3	100	71.820	ENSSMAG00000016096	casc3	100	69.538	Scophthalmus_maximus
ENSAOCG00000016676	casc3	100	75.254	ENSSDUG00000016893	casc3	95	76.015	Seriola_dumerili
ENSAOCG00000016676	casc3	82	79.885	ENSSLDG00000020308	casc3	100	81.609	Seriola_lalandi_dorsalis
ENSAOCG00000016676	casc3	100	89.295	ENSSPAG00000023008	casc3	100	89.295	Stegastes_partitus
ENSAOCG00000016676	casc3	96	69.137	ENSTRUG00000000673	casc3	95	66.396	Takifugu_rubripes
ENSAOCG00000016676	casc3	91	71.990	ENSTNIG00000003208	casc3	88	82.192	Tetraodon_nigroviridis
ENSAOCG00000016676	casc3	51	56.842	ENSTTRG00000016896	CASC3	61	73.333	Tursiops_truncatus
ENSAOCG00000016676	casc3	77	52.941	ENSUAMG00000015116	CASC3	82	53.376	Ursus_americanus
ENSAOCG00000016676	casc3	69	52.941	ENSUMAG00000017697	CASC3	86	64.430	Ursus_maritimus
ENSAOCG00000016676	casc3	71	52.030	ENSXETG00000024395	casc3	88	49.511	Xenopus_tropicalis
ENSAOCG00000016676	casc3	100	72.414	ENSXMAG00000013937	casc3	100	72.681	Xiphophorus_maculatus