EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAOCG00000016855 (Gene tree)
Gene ID: 111576359
Gene Symbol: rnaseh2c
Alias: fc08g11|im:5617510|si:dkey-147f20.5|wu:fc08g11
Full Name: ribonuclease H2 subunit C
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Plus strand
Length: 5469 bases
Position: chrNXFZ01003143.1:251516-256984
Accession: 111576359
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000012403	RNase_H2_suC	PF08615.11	3.7e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000020109	-	3912	XM_023281987	ENSAOCP00000012403	136 (aa)	XP_023137755	UPI000C304264

Gene Model

Click here to download ENSAOCG00000016855's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000016855's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000016855	rnaseh2c	100	97.059	ENSAPOG00000012901	rnaseh2c	99	97.059	Acanthochromis_polyacanthus
ENSAOCG00000016855	rnaseh2c	100	85.294	ENSACIG00000022433	rnaseh2c	100	85.294	Amphilophus_citrinellus
ENSAOCG00000016855	rnaseh2c	100	99.265	ENSAPEG00000009850	rnaseh2c	100	99.265	Amphiprion_percula
ENSAOCG00000016855	rnaseh2c	100	91.176	ENSATEG00000014395	rnaseh2c	100	91.176	Anabas_testudineus
ENSAOCG00000016855	rnaseh2c	100	86.029	ENSACLG00000016950	rnaseh2c	100	86.029	Astatotilapia_calliptera
ENSAOCG00000016855	rnaseh2c	99	65.926	ENSAMXG00000001210	rnaseh2c	100	65.926	Astyanax_mexicanus
ENSAOCG00000016855	rnaseh2c	99	53.731	ENSCPBG00000023408	-	96	53.731	Chrysemys_picta_bellii
ENSAOCG00000016855	rnaseh2c	100	85.294	ENSCSEG00000005808	rnaseh2c	99	85.294	Cynoglossus_semilaevis
ENSAOCG00000016855	rnaseh2c	100	84.559	ENSCVAG00000006337	rnaseh2c	100	84.559	Cyprinodon_variegatus
ENSAOCG00000016855	rnaseh2c	100	67.647	ENSDARG00000089637	rnaseh2c	99	67.647	Danio_rerio
ENSAOCG00000016855	rnaseh2c	78	53.704	ENSEBUG00000014939	rnaseh2c	69	53.704	Eptatretus_burgeri
ENSAOCG00000016855	rnaseh2c	99	73.333	ENSELUG00000007345	rnaseh2c	99	73.333	Esox_lucius
ENSAOCG00000016855	rnaseh2c	96	83.077	ENSFHEG00000002419	rnaseh2c	95	83.077	Fundulus_heteroclitus
ENSAOCG00000016855	rnaseh2c	65	78.652	ENSGMOG00000008727	rnaseh2c	99	78.652	Gadus_morhua
ENSAOCG00000016855	rnaseh2c	100	83.824	ENSGAFG00000016755	rnaseh2c	83	83.824	Gambusia_affinis
ENSAOCG00000016855	rnaseh2c	99	53.731	ENSGAGG00000008193	-	96	53.731	Gopherus_agassizii
ENSAOCG00000016855	rnaseh2c	100	88.235	ENSHBUG00000012806	rnaseh2c	100	88.235	Haplochromis_burtoni
ENSAOCG00000016855	rnaseh2c	100	80.882	ENSHCOG00000007177	rnaseh2c	100	80.882	Hippocampus_comes
ENSAOCG00000016855	rnaseh2c	100	64.706	ENSIPUG00000018044	rnaseh2c	100	64.706	Ictalurus_punctatus
ENSAOCG00000016855	rnaseh2c	100	84.559	ENSKMAG00000004184	rnaseh2c	100	84.559	Kryptolebias_marmoratus
ENSAOCG00000016855	rnaseh2c	100	86.861	ENSLBEG00000005742	rnaseh2c	100	86.861	Labrus_bergylta
ENSAOCG00000016855	rnaseh2c	95	56.589	ENSLACG00000010120	-	93	56.061	Latimeria_chalumnae
ENSAOCG00000016855	rnaseh2c	100	85.294	ENSMAMG00000021610	rnaseh2c	100	85.294	Mastacembelus_armatus
ENSAOCG00000016855	rnaseh2c	100	86.765	ENSMZEG00005004796	rnaseh2c	100	86.765	Maylandia_zebra
ENSAOCG00000016855	rnaseh2c	100	86.765	ENSMMOG00000002869	rnaseh2c	100	86.765	Mola_mola
ENSAOCG00000016855	rnaseh2c	100	89.781	ENSMALG00000012198	rnaseh2c	100	89.781	Monopterus_albus
ENSAOCG00000016855	rnaseh2c	100	88.235	ENSNBRG00000001462	rnaseh2c	100	88.235	Neolamprologus_brichardi
ENSAOCG00000016855	rnaseh2c	100	87.500	ENSONIG00000005338	rnaseh2c	99	87.500	Oreochromis_niloticus
ENSAOCG00000016855	rnaseh2c	100	79.412	ENSORLG00000023473	rnaseh2c	100	79.412	Oryzias_latipes
ENSAOCG00000016855	rnaseh2c	100	79.412	ENSORLG00020019053	rnaseh2c	91	79.412	Oryzias_latipes_hni
ENSAOCG00000016855	rnaseh2c	100	80.147	ENSORLG00015017067	rnaseh2c	91	80.147	Oryzias_latipes_hsok
ENSAOCG00000016855	rnaseh2c	100	80.147	ENSOMEG00000018607	rnaseh2c	100	80.147	Oryzias_melastigma
ENSAOCG00000016855	rnaseh2c	100	61.029	ENSPKIG00000019331	rnaseh2c	100	61.029	Paramormyrops_kingsleyae
ENSAOCG00000016855	rnaseh2c	100	80.147	ENSPFOG00000009415	rnaseh2c	100	80.147	Poecilia_formosa
ENSAOCG00000016855	rnaseh2c	100	80.882	ENSPLAG00000023330	rnaseh2c	100	80.882	Poecilia_latipinna
ENSAOCG00000016855	rnaseh2c	100	80.882	ENSPMEG00000003696	rnaseh2c	100	80.882	Poecilia_mexicana
ENSAOCG00000016855	rnaseh2c	100	74.830	ENSPREG00000015384	rnaseh2c	73	74.830	Poecilia_reticulata
ENSAOCG00000016855	rnaseh2c	100	88.235	ENSPNYG00000014766	rnaseh2c	100	88.235	Pundamilia_nyererei
ENSAOCG00000016855	rnaseh2c	99	63.704	ENSPNAG00000019111	rnaseh2c	99	63.704	Pygocentrus_nattereri
ENSAOCG00000016855	rnaseh2c	99	67.407	ENSSFOG00015005760	rnaseh2c	99	67.407	Scleropages_formosus
ENSAOCG00000016855	rnaseh2c	100	90.441	ENSSMAG00000017738	rnaseh2c	100	90.441	Scophthalmus_maximus
ENSAOCG00000016855	rnaseh2c	100	91.912	ENSSDUG00000017285	rnaseh2c	100	91.912	Seriola_dumerili
ENSAOCG00000016855	rnaseh2c	100	93.382	ENSSLDG00000016030	rnaseh2c	100	93.382	Seriola_lalandi_dorsalis
ENSAOCG00000016855	rnaseh2c	94	51.908	ENSSPUG00000000842	-	88	50.746	Sphenodon_punctatus
ENSAOCG00000016855	rnaseh2c	100	90.441	ENSSPAG00000007536	rnaseh2c	100	90.441	Stegastes_partitus
ENSAOCG00000016855	rnaseh2c	100	79.412	ENSTRUG00000021845	rnaseh2c	100	79.412	Takifugu_rubripes
ENSAOCG00000016855	rnaseh2c	100	83.088	ENSTNIG00000000431	rnaseh2c	100	83.088	Tetraodon_nigroviridis
ENSAOCG00000016855	rnaseh2c	99	50.000	ENSXETG00000032466	-	98	50.000	Xenopus_tropicalis
ENSAOCG00000016855	rnaseh2c	100	82.353	ENSXCOG00000001611	rnaseh2c	100	82.353	Xiphophorus_couchianus
ENSAOCG00000016855	rnaseh2c	100	84.559	ENSXMAG00000003147	rnaseh2c	83	84.559	Xiphophorus_maculatus