EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAOCG00000017186 (Gene tree)
Gene ID: 111580993
Gene Symbol: ptcd3
Alias: fa08d08|wu:fa08d08|zgc:123014
Full Name: pentatricopeptide repeat domain 3
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Plus strand
Length: 17417 bases
Position: chrNXFZ01003653.1:150456-167872
Accession: 111580993
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000012684	PPR	PF01535.20	2.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000020493	-	2241	XM_023288962	ENSAOCP00000012684	678 (aa)	XP_023144730	UPI000C303D38

Gene Model

Click here to download ENSAOCG00000017186's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000017186's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000017186	ptcd3	88	73.856	ENSACIG00000022263	ptcd3	100	73.856	Amphilophus_citrinellus
ENSAOCG00000017186	ptcd3	100	99.410	ENSAPEG00000016069	ptcd3	100	99.410	Amphiprion_percula
ENSAOCG00000017186	ptcd3	86	47.555	ENSAPLG00000005086	PTCD3	97	47.555	Anas_platyrhynchos
ENSAOCG00000017186	ptcd3	98	78.829	ENSACLG00000020653	ptcd3	100	78.829	Astatotilapia_calliptera
ENSAOCG00000017186	ptcd3	97	57.489	ENSAMXG00000011570	ptcd3	99	57.489	Astyanax_mexicanus
ENSAOCG00000017186	ptcd3	96	71.713	ENSCVAG00000020820	ptcd3	99	73.090	Cyprinodon_variegatus
ENSAOCG00000017186	ptcd3	83	68.078	ENSGAFG00000015291	ptcd3	94	68.078	Gambusia_affinis
ENSAOCG00000017186	ptcd3	98	79.129	ENSHBUG00000020056	ptcd3	100	79.129	Haplochromis_burtoni
ENSAOCG00000017186	ptcd3	97	71.386	ENSLBEG00000015349	ptcd3	99	71.386	Labrus_bergylta
ENSAOCG00000017186	ptcd3	98	79.129	ENSMZEG00005004980	ptcd3	100	79.129	Maylandia_zebra
ENSAOCG00000017186	ptcd3	90	44.643	ENSMGAG00000013124	PTCD3	98	45.146	Meleagris_gallopavo
ENSAOCG00000017186	ptcd3	98	74.439	ENSMALG00000013282	ptcd3	100	74.439	Monopterus_albus
ENSAOCG00000017186	ptcd3	88	73.658	ENSNBRG00000000447	ptcd3	100	73.658	Neolamprologus_brichardi
ENSAOCG00000017186	ptcd3	98	79.129	ENSONIG00000015886	ptcd3	100	79.129	Oreochromis_niloticus
ENSAOCG00000017186	ptcd3	97	72.079	ENSORLG00000008776	ptcd3	100	72.000	Oryzias_latipes
ENSAOCG00000017186	ptcd3	97	71.472	ENSORLG00020020676	ptcd3	98	71.472	Oryzias_latipes_hni
ENSAOCG00000017186	ptcd3	85	58.961	ENSORLG00015015978	ptcd3	99	59.428	Oryzias_latipes_hsok
ENSAOCG00000017186	ptcd3	96	70.814	ENSPFOG00000004442	ptcd3	100	70.814	Poecilia_formosa
ENSAOCG00000017186	ptcd3	88	69.760	ENSPLAG00000021401	ptcd3	100	70.080	Poecilia_latipinna
ENSAOCG00000017186	ptcd3	86	68.430	ENSPMEG00000007153	ptcd3	100	68.771	Poecilia_mexicana
ENSAOCG00000017186	ptcd3	98	53.079	ENSSFOG00015019643	ptcd3	100	53.079	Scleropages_formosus
ENSAOCG00000017186	ptcd3	78	52.045	ENSTGUG00000010760	PTCD3	100	52.045	Taeniopygia_guttata
ENSAOCG00000017186	ptcd3	98	62.388	ENSTRUG00000003939	ptcd3	100	62.388	Takifugu_rubripes