EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAOCG00000017231 (Gene tree)
Gene ID: 111584772
Gene Symbol: rif1
Alias: fc38c03|si:dkey-89p3.2|wu:fc38c03
Full Name: replication timing regulatory factor 1
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Plus strand
Length: 36781 bases
Position: chrNXFZ01004318.1:68807-105587
Accession: 111584772
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000012702	Rif1_N	PF12231.8	1.3e-77	1	1
ENSAOCP00000027938	Rif1_N	PF12231.8	1.3e-77	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000020544	-	8344	XM_023294019	ENSAOCP00000027938	2421 (aa)	XP_023149787	UPI000C30A38B
ENSAOCT00000020508	-	8236	-	ENSAOCP00000012702	2385 (aa)	-	-

Gene Model

Click here to download ENSAOCG00000017231's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000017231's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000017231	rif1	68	47.536	ENSG00000080345	RIF1	97	54.061	Homo_sapiens
ENSAOCG00000017231	rif1	99	89.216	ENSAPOG00000011073	rif1	99	88.848	Acanthochromis_polyacanthus
ENSAOCG00000017231	rif1	64	48.926	ENSAMEG00000008461	RIF1	64	48.926	Ailuropoda_melanoleuca
ENSAOCG00000017231	rif1	87	75.223	ENSACIG00000017765	rif1	99	75.055	Amphilophus_citrinellus
ENSAOCG00000017231	rif1	95	97.015	ENSAPEG00000013228	rif1	99	97.015	Amphiprion_percula
ENSAOCG00000017231	rif1	96	70.000	ENSATEG00000022887	rif1	99	70.000	Anabas_testudineus
ENSAOCG00000017231	rif1	67	51.642	ENSAPLG00000007092	RIF1	72	51.229	Anas_platyrhynchos
ENSAOCG00000017231	rif1	50	48.646	ENSACAG00000003714	RIF1	53	48.646	Anolis_carolinensis
ENSAOCG00000017231	rif1	66	48.233	ENSANAG00000024840	RIF1	66	48.387	Aotus_nancymaae
ENSAOCG00000017231	rif1	61	56.536	ENSAMXG00000010910	rif1	62	56.802	Astyanax_mexicanus
ENSAOCG00000017231	rif1	58	49.279	ENSBTAG00000021020	RIF1	63	48.010	Bos_taurus
ENSAOCG00000017231	rif1	64	49.283	ENSCJAG00000003138	RIF1	64	49.443	Callithrix_jacchus
ENSAOCG00000017231	rif1	66	47.826	ENSCAFG00000005670	RIF1	63	48.933	Canis_familiaris
ENSAOCG00000017231	rif1	66	47.937	ENSCAFG00020016401	RIF1	66	48.016	Canis_lupus_dingo
ENSAOCG00000017231	rif1	65	50.159	ENSCHIG00000020327	RIF1	63	50.159	Capra_hircus
ENSAOCG00000017231	rif1	66	46.431	ENSTSYG00000008861	RIF1	64	46.508	Carlito_syrichta
ENSAOCG00000017231	rif1	60	37.110	ENSCAPG00000008957	RIF1	91	37.387	Cavia_aperea
ENSAOCG00000017231	rif1	54	45.082	ENSCPOG00000037898	RIF1	55	45.448	Cavia_porcellus
ENSAOCG00000017231	rif1	64	46.491	ENSCCAG00000024760	RIF1	64	46.571	Cebus_capucinus
ENSAOCG00000017231	rif1	66	48.430	ENSCATG00000033353	RIF1	65	48.696	Cercocebus_atys
ENSAOCG00000017231	rif1	60	49.262	ENSCLAG00000001517	RIF1	62	49.521	Chinchilla_lanigera
ENSAOCG00000017231	rif1	64	48.651	ENSCSAG00000016089	RIF1	64	48.651	Chlorocebus_sabaeus
ENSAOCG00000017231	rif1	68	51.843	ENSCPBG00000025885	RIF1	75	50.879	Chrysemys_picta_bellii
ENSAOCG00000017231	rif1	59	54.867	ENSCANG00000028962	RIF1	62	54.867	Colobus_angolensis_palliatus
ENSAOCG00000017231	rif1	55	45.514	ENSCGRG00001024589	Rif1	55	46.439	Cricetulus_griseus_chok1gshd
ENSAOCG00000017231	rif1	53	46.859	ENSCGRG00000010713	Rif1	55	47.771	Cricetulus_griseus_crigri
ENSAOCG00000017231	rif1	94	62.071	ENSCSEG00000003945	rif1	99	62.071	Cynoglossus_semilaevis
ENSAOCG00000017231	rif1	83	64.904	ENSCVAG00000022479	rif1	100	55.582	Cyprinodon_variegatus
ENSAOCG00000017231	rif1	55	57.029	ENSDARG00000062650	rif1	55	60.105	Danio_rerio
ENSAOCG00000017231	rif1	51	48.497	ENSDNOG00000011194	RIF1	62	48.734	Dasypus_novemcinctus
ENSAOCG00000017231	rif1	60	56.195	ENSETEG00000012421	RIF1	60	56.195	Echinops_telfairi
ENSAOCG00000017231	rif1	57	66.776	ENSEASG00005023434	RIF1	60	66.776	Equus_asinus_asinus
ENSAOCG00000017231	rif1	62	59.578	ENSECAG00000012679	RIF1	63	59.578	Equus_caballus
ENSAOCG00000017231	rif1	76	64.481	ENSELUG00000006826	rif1	68	64.481	Esox_lucius
ENSAOCG00000017231	rif1	66	47.615	ENSFCAG00000029742	RIF1	65	47.694	Felis_catus
ENSAOCG00000017231	rif1	65	47.724	ENSFALG00000013874	RIF1	74	51.213	Ficedula_albicollis
ENSAOCG00000017231	rif1	66	48.706	ENSFDAG00000006538	RIF1	65	48.875	Fukomys_damarensis
ENSAOCG00000017231	rif1	97	65.549	ENSFHEG00000013721	rif1	99	55.410	Fundulus_heteroclitus
ENSAOCG00000017231	rif1	67	60.762	ENSGMOG00000003517	rif1	100	60.691	Gadus_morhua
ENSAOCG00000017231	rif1	59	50.314	ENSGALG00000012484	RIF1	52	49.596	Gallus_gallus
ENSAOCG00000017231	rif1	92	75.662	ENSGAFG00000017196	rif1	100	62.963	Gambusia_affinis
ENSAOCG00000017231	rif1	67	65.808	ENSGACG00000008579	rif1	73	66.306	Gasterosteus_aculeatus
ENSAOCG00000017231	rif1	65	50.727	ENSGAGG00000012595	RIF1	73	47.965	Gopherus_agassizii
ENSAOCG00000017231	rif1	51	49.216	ENSHGLG00100009807	RIF1	64	49.246	Heterocephalus_glaber_male
ENSAOCG00000017231	rif1	94	64.970	ENSHCOG00000015943	rif1	90	63.188	Hippocampus_comes
ENSAOCG00000017231	rif1	76	59.055	ENSIPUG00000021703	rif1	78	59.055	Ictalurus_punctatus
ENSAOCG00000017231	rif1	55	46.855	ENSSTOG00000020712	RIF1	69	47.523	Ictidomys_tridecemlineatus
ENSAOCG00000017231	rif1	66	45.308	ENSJJAG00000023000	Rif1	67	45.622	Jaculus_jaculus
ENSAOCG00000017231	rif1	97	66.959	ENSKMAG00000002852	rif1	99	66.771	Kryptolebias_marmoratus
ENSAOCG00000017231	rif1	94	69.137	ENSLBEG00000023196	rif1	96	66.094	Labrus_bergylta
ENSAOCG00000017231	rif1	65	51.499	ENSLACG00000005425	RIF1	68	52.056	Latimeria_chalumnae
ENSAOCG00000017231	rif1	78	57.224	ENSLOCG00000002657	rif1	77	58.357	Lepisosteus_oculatus
ENSAOCG00000017231	rif1	50	49.644	ENSLAFG00000009796	RIF1	67	49.644	Loxodonta_africana
ENSAOCG00000017231	rif1	64	48.571	ENSMFAG00000032233	RIF1	64	48.571	Macaca_fascicularis
ENSAOCG00000017231	rif1	64	48.571	ENSMMUG00000008611	RIF1	64	48.571	Macaca_mulatta
ENSAOCG00000017231	rif1	64	48.047	ENSMNEG00000031616	RIF1	64	48.349	Macaca_nemestrina
ENSAOCG00000017231	rif1	64	48.430	ENSMLEG00000042945	RIF1	64	48.696	Mandrillus_leucophaeus
ENSAOCG00000017231	rif1	82	67.443	ENSMAMG00000001745	rif1	83	65.761	Mastacembelus_armatus
ENSAOCG00000017231	rif1	96	69.579	ENSMZEG00005020920	rif1	99	73.864	Maylandia_zebra
ENSAOCG00000017231	rif1	64	52.203	ENSMGAG00000012732	RIF1	70	52.278	Meleagris_gallopavo
ENSAOCG00000017231	rif1	64	63.842	ENSMAUG00000013158	Rif1	67	63.842	Mesocricetus_auratus
ENSAOCG00000017231	rif1	63	48.110	ENSMICG00000046127	RIF1	63	48.850	Microcebus_murinus
ENSAOCG00000017231	rif1	66	47.671	ENSMOCG00000009381	Rif1	66	47.671	Microtus_ochrogaster
ENSAOCG00000017231	rif1	64	64.706	ENSMMOG00000006519	rif1	65	64.205	Mola_mola
ENSAOCG00000017231	rif1	64	51.118	ENSMODG00000003703	RIF1	65	50.434	Monodelphis_domestica
ENSAOCG00000017231	rif1	77	72.329	ENSMALG00000016759	rif1	99	65.107	Monopterus_albus
ENSAOCG00000017231	rif1	50	47.795	MGP_CAROLIEiJ_G0023555	Rif1	52	49.484	Mus_caroli
ENSAOCG00000017231	rif1	63	48.415	ENSMUSG00000036202	Rif1	64	48.494	Mus_musculus
ENSAOCG00000017231	rif1	63	45.120	MGP_PahariEiJ_G0025006	Rif1	63	45.840	Mus_pahari
ENSAOCG00000017231	rif1	66	47.273	MGP_SPRETEiJ_G0024476	Rif1	67	47.464	Mus_spretus
ENSAOCG00000017231	rif1	64	48.292	ENSMPUG00000000371	RIF1	63	48.292	Mustela_putorius_furo
ENSAOCG00000017231	rif1	53	45.311	ENSMLUG00000003376	RIF1	60	45.311	Myotis_lucifugus
ENSAOCG00000017231	rif1	50	49.643	ENSNGAG00000009268	Rif1	54	48.843	Nannospalax_galili
ENSAOCG00000017231	rif1	96	68.922	ENSNBRG00000014257	rif1	99	73.198	Neolamprologus_brichardi
ENSAOCG00000017231	rif1	66	46.792	ENSNLEG00000010955	RIF1	66	46.943	Nomascus_leucogenys
ENSAOCG00000017231	rif1	63	47.193	ENSODEG00000003950	RIF1	64	47.496	Octodon_degus
ENSAOCG00000017231	rif1	97	71.785	ENSONIG00000013657	rif1	100	60.515	Oreochromis_niloticus
ENSAOCG00000017231	rif1	54	54.891	ENSOANG00000006078	-	55	54.891	Ornithorhynchus_anatinus
ENSAOCG00000017231	rif1	52	48.487	ENSOCUG00000017435	RIF1	73	47.674	Oryctolagus_cuniculus
ENSAOCG00000017231	rif1	93	66.049	ENSORLG00020001302	rif1	99	64.218	Oryzias_latipes_hni
ENSAOCG00000017231	rif1	95	65.134	ENSORLG00015000009	rif1	99	64.928	Oryzias_latipes_hsok
ENSAOCG00000017231	rif1	89	66.054	ENSOMEG00000021513	rif1	63	66.010	Oryzias_melastigma
ENSAOCG00000017231	rif1	69	46.906	ENSOGAG00000006141	RIF1	69	46.906	Otolemur_garnettii
ENSAOCG00000017231	rif1	64	49.762	ENSOARG00000008930	RIF1	64	50.792	Ovis_aries
ENSAOCG00000017231	rif1	68	47.536	ENSPPAG00000023754	RIF1	53	48.522	Pan_paniscus
ENSAOCG00000017231	rif1	66	47.731	ENSPPRG00000003618	RIF1	65	47.802	Panthera_pardus
ENSAOCG00000017231	rif1	66	47.731	ENSPTIG00000020652	RIF1	65	47.802	Panthera_tigris_altaica
ENSAOCG00000017231	rif1	68	47.612	ENSPTRG00000012534	RIF1	53	48.597	Pan_troglodytes
ENSAOCG00000017231	rif1	64	48.587	ENSPANG00000008525	RIF1	64	48.854	Papio_anubis
ENSAOCG00000017231	rif1	76	60.282	ENSPKIG00000004267	rif1	76	60.282	Paramormyrops_kingsleyae
ENSAOCG00000017231	rif1	77	61.873	ENSPMGG00000016141	rif1	99	58.209	Periophthalmus_magnuspinnatus
ENSAOCG00000017231	rif1	68	45.983	ENSPEMG00000000446	Rif1	64	48.945	Peromyscus_maniculatus_bairdii
ENSAOCG00000017231	rif1	67	49.885	ENSPCIG00000009185	RIF1	68	49.885	Phascolarctos_cinereus
ENSAOCG00000017231	rif1	96	67.669	ENSPFOG00000017804	rif1	99	65.915	Poecilia_formosa
ENSAOCG00000017231	rif1	88	66.784	ENSPFOG00000000554	-	99	64.806	Poecilia_formosa
ENSAOCG00000017231	rif1	96	65.784	ENSPLAG00000017945	rif1	99	65.649	Poecilia_latipinna
ENSAOCG00000017231	rif1	86	64.089	ENSPMEG00000006897	-	99	63.717	Poecilia_mexicana
ENSAOCG00000017231	rif1	95	66.938	ENSPREG00000018052	rif1	92	73.279	Poecilia_reticulata
ENSAOCG00000017231	rif1	68	47.489	ENSPPYG00000012846	RIF1	67	47.489	Pongo_abelii
ENSAOCG00000017231	rif1	64	48.583	ENSPCOG00000027888	RIF1	63	49.088	Propithecus_coquereli
ENSAOCG00000017231	rif1	56	59.388	ENSPVAG00000014276	RIF1	58	59.388	Pteropus_vampyrus
ENSAOCG00000017231	rif1	96	66.923	ENSPNYG00000012940	rif1	99	71.388	Pundamilia_nyererei
ENSAOCG00000017231	rif1	62	55.946	ENSPNAG00000016685	rif1	65	56.278	Pygocentrus_nattereri
ENSAOCG00000017231	rif1	66	45.524	ENSRNOG00000054901	Rif1	53	46.565	Rattus_norvegicus
ENSAOCG00000017231	rif1	50	49.558	ENSRBIG00000003704	RIF1	51	49.796	Rhinopithecus_bieti
ENSAOCG00000017231	rif1	65	48.223	ENSRROG00000028206	RIF1	65	48.223	Rhinopithecus_roxellana
ENSAOCG00000017231	rif1	65	55.952	ENSSBOG00000029530	RIF1	66	55.952	Saimiri_boliviensis_boliviensis
ENSAOCG00000017231	rif1	65	50.159	ENSSHAG00000018552	RIF1	65	50.159	Sarcophilus_harrisii
ENSAOCG00000017231	rif1	77	57.064	ENSSFOG00015021539	rif1	88	55.752	Scleropages_formosus
ENSAOCG00000017231	rif1	83	71.106	ENSSMAG00000011704	rif1	96	74.129	Scophthalmus_maximus
ENSAOCG00000017231	rif1	91	75.086	ENSSDUG00000015632	rif1	99	76.343	Seriola_dumerili
ENSAOCG00000017231	rif1	65	73.391	ENSSLDG00000019531	rif1	66	73.587	Seriola_lalandi_dorsalis
ENSAOCG00000017231	rif1	63	50.839	ENSSPUG00000003062	RIF1	67	51.436	Sphenodon_punctatus
ENSAOCG00000017231	rif1	63	82.794	ENSSPAG00000018359	rif1	96	82.794	Stegastes_partitus
ENSAOCG00000017231	rif1	72	48.704	ENSSSCG00000016395	RIF1	70	48.933	Sus_scrofa
ENSAOCG00000017231	rif1	89	66.927	ENSTRUG00000015808	rif1	97	65.774	Takifugu_rubripes
ENSAOCG00000017231	rif1	85	65.789	ENSTNIG00000011538	rif1	93	66.054	Tetraodon_nigroviridis
ENSAOCG00000017231	rif1	58	54.582	ENSTBEG00000016082	RIF1	57	54.582	Tupaia_belangeri
ENSAOCG00000017231	rif1	67	49.682	ENSTTRG00000011190	RIF1	65	49.682	Tursiops_truncatus
ENSAOCG00000017231	rif1	55	47.461	ENSUAMG00000026385	RIF1	59	47.461	Ursus_americanus
ENSAOCG00000017231	rif1	65	49.406	ENSUMAG00000000337	RIF1	64	49.406	Ursus_maritimus
ENSAOCG00000017231	rif1	67	49.522	ENSVPAG00000002162	RIF1	65	49.522	Vicugna_pacos
ENSAOCG00000017231	rif1	65	47.162	ENSVVUG00000011293	RIF1	64	47.843	Vulpes_vulpes
ENSAOCG00000017231	rif1	76	47.875	ENSXETG00000004530	rif1	70	47.875	Xenopus_tropicalis
ENSAOCG00000017231	rif1	93	62.298	ENSXMAG00000000506	rif1	99	60.534	Xiphophorus_maculatus