EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAOCG00000017462 (Gene tree)
Gene ID: 111588481
Gene Symbol: -
Alias: -
Full Name: G-rich sequence factor 1-like
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Minus strand
Length: 12176 bases
Position: chrNXFZ01005984.1:38133-50308
Accession: 111588481
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000012926	RRM_1	PF00076.22	5.7e-25	1	2
ENSAOCP00000012926	RRM_1	PF00076.22	5.7e-25	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000020822	-	1974	XM_023298892	ENSAOCP00000012926	398 (aa)	XP_023154660	UPI000C313858

Gene Model

Click here to download ENSAOCG00000017462's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000017462's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAOCG00000017462	-	76	58.667	ENSAOCG00000011957	hnrnph3	68	57.895
ENSAOCG00000017462	-	76	42.025	ENSAOCG00000008372	hnrnph1	80	41.896

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000017462	-	100	91.729	ENSAPOG00000012487	grsf1	100	91.729	Acanthochromis_polyacanthus
ENSAOCG00000017462	-	100	72.932	ENSACIG00000005871	grsf1	100	72.932	Amphilophus_citrinellus
ENSAOCG00000017462	-	100	98.997	ENSAPEG00000007240	-	100	98.997	Amphiprion_percula
ENSAOCG00000017462	-	99	66.247	ENSATEG00000007185	grsf1	99	66.247	Anabas_testudineus
ENSAOCG00000017462	-	100	72.772	ENSACLG00000003685	-	100	72.772	Astatotilapia_calliptera
ENSAOCG00000017462	-	86	51.242	ENSAMXG00000012270	grsf1	98	51.242	Astyanax_mexicanus
ENSAOCG00000017462	-	99	59.133	ENSCSEG00000019209	-	99	59.133	Cynoglossus_semilaevis
ENSAOCG00000017462	-	99	62.469	ENSCVAG00000004476	grsf1	100	62.469	Cyprinodon_variegatus
ENSAOCG00000017462	-	100	46.517	ENSDARG00000053021	grsf1	96	46.517	Danio_rerio
ENSAOCG00000017462	-	99	52.088	ENSFHEG00000013358	-	99	52.580	Fundulus_heteroclitus
ENSAOCG00000017462	-	75	52.805	ENSGMOG00000014047	grsf1	100	52.805	Gadus_morhua
ENSAOCG00000017462	-	99	65.012	ENSGAFG00000004496	grsf1	99	65.012	Gambusia_affinis
ENSAOCG00000017462	-	76	61.656	ENSGACG00000014447	grsf1	97	61.656	Gasterosteus_aculeatus
ENSAOCG00000017462	-	100	72.953	ENSHBUG00000006284	grsf1	99	72.953	Haplochromis_burtoni
ENSAOCG00000017462	-	99	55.890	ENSHCOG00000007715	-	99	55.890	Hippocampus_comes
ENSAOCG00000017462	-	83	54.711	ENSIPUG00000010533	grsf1	83	54.711	Ictalurus_punctatus
ENSAOCG00000017462	-	99	59.574	ENSKMAG00000004528	grsf1	100	59.574	Kryptolebias_marmoratus
ENSAOCG00000017462	-	73	56.271	ENSLBEG00000018100	grsf1	97	54.723	Labrus_bergylta
ENSAOCG00000017462	-	98	67.241	ENSMAMG00000002627	grsf1	99	67.241	Mastacembelus_armatus
ENSAOCG00000017462	-	100	72.772	ENSMZEG00005020633	-	100	72.772	Maylandia_zebra
ENSAOCG00000017462	-	94	63.733	ENSMMOG00000014231	grsf1	98	63.307	Mola_mola
ENSAOCG00000017462	-	98	64.951	ENSMALG00000000251	grsf1	99	64.951	Monopterus_albus
ENSAOCG00000017462	-	98	72.040	ENSNBRG00000017774	grsf1	96	72.040	Neolamprologus_brichardi
ENSAOCG00000017462	-	100	74.010	ENSONIG00000014119	grsf1	100	74.010	Oreochromis_niloticus
ENSAOCG00000017462	-	99	64.810	ENSORLG00000030211	grsf1	99	64.810	Oryzias_latipes
ENSAOCG00000017462	-	99	64.557	ENSORLG00020014383	grsf1	99	65.570	Oryzias_latipes_hni
ENSAOCG00000017462	-	99	64.051	ENSORLG00015006520	grsf1	99	65.063	Oryzias_latipes_hsok
ENSAOCG00000017462	-	95	64.380	ENSOMEG00000009181	grsf1	99	64.975	Oryzias_melastigma
ENSAOCG00000017462	-	83	54.354	ENSPKIG00000019432	grsf1	80	54.354	Paramormyrops_kingsleyae
ENSAOCG00000017462	-	83	64.058	ENSPMGG00000013654	grsf1	94	64.058	Periophthalmus_magnuspinnatus
ENSAOCG00000017462	-	99	62.654	ENSPFOG00000006122	grsf1	99	64.128	Poecilia_formosa
ENSAOCG00000017462	-	99	64.764	ENSPLAG00000020977	grsf1	99	64.268	Poecilia_latipinna
ENSAOCG00000017462	-	99	64.390	ENSPMEG00000012485	grsf1	99	64.390	Poecilia_mexicana
ENSAOCG00000017462	-	99	64.532	ENSPREG00000013383	grsf1	99	64.532	Poecilia_reticulata
ENSAOCG00000017462	-	100	72.772	ENSPNYG00000005379	grsf1	100	72.772	Pundamilia_nyererei
ENSAOCG00000017462	-	83	57.186	ENSPNAG00000014912	grsf1	81	57.186	Pygocentrus_nattereri
ENSAOCG00000017462	-	82	46.547	ENSSFOG00015014620	grsf1	84	46.547	Scleropages_formosus
ENSAOCG00000017462	-	100	64.923	ENSSMAG00000014181	grsf1	88	64.923	Scophthalmus_maximus
ENSAOCG00000017462	-	100	62.129	ENSSDUG00000009397	-	99	66.467	Seriola_dumerili
ENSAOCG00000017462	-	100	63.366	ENSSLDG00000025494	grsf1	100	63.366	Seriola_lalandi_dorsalis
ENSAOCG00000017462	-	99	73.869	ENSSPAG00000023296	grsf1	99	73.869	Stegastes_partitus
ENSAOCG00000017462	-	96	61.880	ENSTRUG00000015354	grsf1	99	61.519	Takifugu_rubripes
ENSAOCG00000017462	-	78	61.981	ENSTNIG00000015350	-	99	62.739	Tetraodon_nigroviridis
ENSAOCG00000017462	-	99	63.366	ENSXMAG00000029710	grsf1	99	63.366	Xiphophorus_maculatus