EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAOCG00000018004 (Gene tree)
Gene ID: 111564066
Gene Symbol: prpf38a
Alias: fa04h11|fc83e08|wu:fa04h11|wu:fc83e08|zgc:92059
Full Name: pre-mRNA processing factor 38A
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Minus strand
Length: 13007 bases
Position: chrNXFZ01006304.1:210757-223763
Accession: 111564066
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000013466	PRP38	PF03371.15	2.6e-63	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000021505	-	1496	XM_023263414	ENSAOCP00000013466	309 (aa)	XP_023119182	UPI000B8F4D67

Gene Model

Click here to download ENSAOCG00000018004's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000018004's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000018004	prpf38a	100	81.789	ENSG00000134748	PRPF38A	71	88.688	Homo_sapiens
ENSAOCG00000018004	prpf38a	100	100.000	ENSAPOG00000011652	prpf38a	100	100.000	Acanthochromis_polyacanthus
ENSAOCG00000018004	prpf38a	100	81.789	ENSAMEG00000009319	PRPF38A	71	88.688	Ailuropoda_melanoleuca
ENSAOCG00000018004	prpf38a	100	93.851	ENSACIG00000012292	prpf38a	100	93.851	Amphilophus_citrinellus
ENSAOCG00000018004	prpf38a	100	100.000	ENSAPEG00000021414	prpf38a	100	100.000	Amphiprion_percula
ENSAOCG00000018004	prpf38a	72	94.118	ENSATEG00000004608	prpf38a	100	95.146	Anabas_testudineus
ENSAOCG00000018004	prpf38a	79	78.629	ENSAPLG00000005827	PRPF38A	63	86.538	Anas_platyrhynchos
ENSAOCG00000018004	prpf38a	100	81.470	ENSACAG00000008249	PRPF38A	71	88.235	Anolis_carolinensis
ENSAOCG00000018004	prpf38a	100	81.789	ENSANAG00000027839	PRPF38A	71	88.688	Aotus_nancymaae
ENSAOCG00000018004	prpf38a	100	62.222	ENSANAG00000029204	-	70	56.444	Aotus_nancymaae
ENSAOCG00000018004	prpf38a	100	97.087	ENSACLG00000021595	prpf38a	100	97.087	Astatotilapia_calliptera
ENSAOCG00000018004	prpf38a	100	85.304	ENSAMXG00000029274	prpf38a	100	93.610	Astyanax_mexicanus
ENSAOCG00000018004	prpf38a	100	81.789	ENSBTAG00000002720	PRPF38A	75	88.688	Bos_taurus
ENSAOCG00000018004	prpf38a	63	64.103	WBGene00008380	prp-38	59	65.957	Caenorhabditis_elegans
ENSAOCG00000018004	prpf38a	100	81.789	ENSCJAG00000021594	PRPF38A	74	88.688	Callithrix_jacchus
ENSAOCG00000018004	prpf38a	100	81.789	ENSCAFG00000003740	PRPF38A	71	88.688	Canis_familiaris
ENSAOCG00000018004	prpf38a	100	81.789	ENSCAFG00020010939	PRPF38A	71	88.688	Canis_lupus_dingo
ENSAOCG00000018004	prpf38a	100	81.789	ENSCHIG00000024730	PRPF38A	71	88.688	Capra_hircus
ENSAOCG00000018004	prpf38a	100	81.789	ENSTSYG00000009868	-	71	88.688	Carlito_syrichta
ENSAOCG00000018004	prpf38a	86	78.148	ENSTSYG00000031994	-	63	85.393	Carlito_syrichta
ENSAOCG00000018004	prpf38a	100	82.958	ENSCPOG00000005079	PRPF38A	83	84.375	Cavia_porcellus
ENSAOCG00000018004	prpf38a	100	79.487	ENSCCAG00000026502	PRPF38A	71	88.688	Cebus_capucinus
ENSAOCG00000018004	prpf38a	93	56.401	ENSCATG00000044190	-	57	56.915	Cercocebus_atys
ENSAOCG00000018004	prpf38a	100	81.789	ENSCATG00000032296	PRPF38A	71	88.688	Cercocebus_atys
ENSAOCG00000018004	prpf38a	100	81.789	ENSCLAG00000005816	PRPF38A	71	88.688	Chinchilla_lanigera
ENSAOCG00000018004	prpf38a	100	82.109	ENSCPBG00000014791	PRPF38A	71	89.140	Chrysemys_picta_bellii
ENSAOCG00000018004	prpf38a	75	70.130	ENSCSAVG00000009580	-	71	72.350	Ciona_savignyi
ENSAOCG00000018004	prpf38a	75	87.879	ENSCANG00000032608	PRPF38A	74	88.688	Colobus_angolensis_palliatus
ENSAOCG00000018004	prpf38a	100	81.789	ENSCGRG00001018502	-	71	88.688	Cricetulus_griseus_chok1gshd
ENSAOCG00000018004	prpf38a	84	71.264	ENSCGRG00001002557	-	74	75.113	Cricetulus_griseus_chok1gshd
ENSAOCG00000018004	prpf38a	100	81.789	ENSCGRG00000014868	Prpf38a	71	88.688	Cricetulus_griseus_crigri
ENSAOCG00000018004	prpf38a	72	94.144	ENSCSEG00000001269	prpf38a	76	94.144	Cynoglossus_semilaevis
ENSAOCG00000018004	prpf38a	100	96.117	ENSCVAG00000012305	prpf38a	100	96.117	Cyprinodon_variegatus
ENSAOCG00000018004	prpf38a	100	84.345	ENSDARG00000039213	prpf38a	100	92.652	Danio_rerio
ENSAOCG00000018004	prpf38a	100	81.789	ENSDNOG00000042326	PRPF38A	72	88.688	Dasypus_novemcinctus
ENSAOCG00000018004	prpf38a	84	74.905	ENSDORG00000025371	-	67	88.298	Dipodomys_ordii
ENSAOCG00000018004	prpf38a	84	74.905	ENSDORG00000023691	-	67	88.298	Dipodomys_ordii
ENSAOCG00000018004	prpf38a	85	96.875	ENSDORG00000023857	-	64	96.875	Dipodomys_ordii
ENSAOCG00000018004	prpf38a	77	81.590	ENSEBUG00000012588	prpf38a	71	81.166	Eptatretus_burgeri
ENSAOCG00000018004	prpf38a	100	81.789	ENSEASG00005014427	PRPF38A	71	88.688	Equus_asinus_asinus
ENSAOCG00000018004	prpf38a	100	81.789	ENSECAG00000022628	PRPF38A	71	88.688	Equus_caballus
ENSAOCG00000018004	prpf38a	100	94.822	ENSELUG00000021094	prpf38a	100	94.822	Esox_lucius
ENSAOCG00000018004	prpf38a	100	81.789	ENSFCAG00000002518	PRPF38A	71	88.688	Felis_catus
ENSAOCG00000018004	prpf38a	99	76.452	ENSFALG00000003612	-	73	84.862	Ficedula_albicollis
ENSAOCG00000018004	prpf38a	87	80.147	ENSFALG00000005598	-	66	87.778	Ficedula_albicollis
ENSAOCG00000018004	prpf38a	100	82.637	ENSFDAG00000011287	PRPF38A	72	88.688	Fukomys_damarensis
ENSAOCG00000018004	prpf38a	90	82.796	ENSFHEG00000014317	prpf38a	99	94.898	Fundulus_heteroclitus
ENSAOCG00000018004	prpf38a	54	98.795	ENSGMOG00000011384	prpf38a	54	98.795	Gadus_morhua
ENSAOCG00000018004	prpf38a	100	82.748	ENSGALG00000010627	PRPF38A	71	90.045	Gallus_gallus
ENSAOCG00000018004	prpf38a	100	96.440	ENSGAFG00000012422	prpf38a	100	96.440	Gambusia_affinis
ENSAOCG00000018004	prpf38a	72	95.067	ENSGACG00000005423	prpf38a	100	95.498	Gasterosteus_aculeatus
ENSAOCG00000018004	prpf38a	54	94.706	ENSGACG00000000182	-	100	94.706	Gasterosteus_aculeatus
ENSAOCG00000018004	prpf38a	100	82.109	ENSGAGG00000020547	PRPF38A	71	89.140	Gopherus_agassizii
ENSAOCG00000018004	prpf38a	100	81.789	ENSGGOG00000003940	PRPF38A	71	88.688	Gorilla_gorilla
ENSAOCG00000018004	prpf38a	66	97.537	ENSHBUG00000020572	prpf38a	86	97.537	Haplochromis_burtoni
ENSAOCG00000018004	prpf38a	100	73.633	ENSHGLG00000007918	-	71	76.471	Heterocephalus_glaber_female
ENSAOCG00000018004	prpf38a	100	81.789	ENSHGLG00000000475	PRPF38A	71	88.688	Heterocephalus_glaber_female
ENSAOCG00000018004	prpf38a	100	73.633	ENSHGLG00100003928	-	71	76.471	Heterocephalus_glaber_male
ENSAOCG00000018004	prpf38a	100	81.789	ENSHGLG00100008935	PRPF38A	71	88.688	Heterocephalus_glaber_male
ENSAOCG00000018004	prpf38a	59	93.956	ENSHCOG00000020781	prpf38a	59	94.149	Hippocampus_comes
ENSAOCG00000018004	prpf38a	90	81.851	ENSIPUG00000005757	prpf38a	96	91.304	Ictalurus_punctatus
ENSAOCG00000018004	prpf38a	100	81.789	ENSSTOG00000015610	PRPF38A	71	88.688	Ictidomys_tridecemlineatus
ENSAOCG00000018004	prpf38a	100	81.150	ENSJJAG00000015811	Prpf38a	71	87.783	Jaculus_jaculus
ENSAOCG00000018004	prpf38a	72	95.475	ENSKMAG00000006588	prpf38a	100	95.793	Kryptolebias_marmoratus
ENSAOCG00000018004	prpf38a	100	95.469	ENSLBEG00000020585	prpf38a	100	95.469	Labrus_bergylta
ENSAOCG00000018004	prpf38a	100	82.428	ENSLACG00000011495	PRPF38A	71	88.688	Latimeria_chalumnae
ENSAOCG00000018004	prpf38a	100	92.258	ENSLOCG00000006262	prpf38a	95	92.542	Lepisosteus_oculatus
ENSAOCG00000018004	prpf38a	100	81.789	ENSLAFG00000025862	PRPF38A	71	88.688	Loxodonta_africana
ENSAOCG00000018004	prpf38a	100	81.789	ENSMFAG00000039449	PRPF38A	74	88.688	Macaca_fascicularis
ENSAOCG00000018004	prpf38a	87	79.044	ENSMMUG00000014333	PRPF38A	65	85.635	Macaca_mulatta
ENSAOCG00000018004	prpf38a	93	56.055	ENSMNEG00000040242	-	65	58.937	Macaca_nemestrina
ENSAOCG00000018004	prpf38a	100	81.789	ENSMNEG00000031221	PRPF38A	71	88.688	Macaca_nemestrina
ENSAOCG00000018004	prpf38a	100	81.789	ENSMLEG00000041105	PRPF38A	71	88.688	Mandrillus_leucophaeus
ENSAOCG00000018004	prpf38a	100	98.382	ENSMAMG00000015431	prpf38a	100	98.382	Mastacembelus_armatus
ENSAOCG00000018004	prpf38a	100	97.087	ENSMZEG00005017838	prpf38a	100	97.087	Maylandia_zebra
ENSAOCG00000018004	prpf38a	75	89.177	ENSMGAG00000011176	PRPF38A	74	90.045	Meleagris_gallopavo
ENSAOCG00000018004	prpf38a	85	82.955	ENSMAUG00000018029	-	84	84.163	Mesocricetus_auratus
ENSAOCG00000018004	prpf38a	100	81.789	ENSMICG00000014193	PRPF38A	71	88.688	Microcebus_murinus
ENSAOCG00000018004	prpf38a	100	81.789	ENSMOCG00000013080	Prpf38a	71	88.688	Microtus_ochrogaster
ENSAOCG00000018004	prpf38a	100	89.389	ENSMMOG00000016972	prpf38a	84	90.805	Mola_mola
ENSAOCG00000018004	prpf38a	100	79.618	ENSMODG00000000644	PRPF38A	71	85.586	Monodelphis_domestica
ENSAOCG00000018004	prpf38a	100	97.735	ENSMALG00000019363	prpf38a	97	97.735	Monopterus_albus
ENSAOCG00000018004	prpf38a	100	81.470	MGP_CAROLIEiJ_G0026269	Prpf38a	71	88.235	Mus_caroli
ENSAOCG00000018004	prpf38a	100	81.470	ENSMUSG00000063800	Prpf38a	71	88.235	Mus_musculus
ENSAOCG00000018004	prpf38a	100	81.470	MGP_PahariEiJ_G0028602	Prpf38a	71	88.235	Mus_pahari
ENSAOCG00000018004	prpf38a	100	80.831	MGP_SPRETEiJ_G0027238	Prpf38a	93	92.553	Mus_spretus
ENSAOCG00000018004	prpf38a	100	81.789	ENSMPUG00000006896	PRPF38A	71	88.688	Mustela_putorius_furo
ENSAOCG00000018004	prpf38a	100	83.280	ENSNGAG00000011884	Prpf38a	72	88.688	Nannospalax_galili
ENSAOCG00000018004	prpf38a	100	94.822	ENSNBRG00000004013	prpf38a	98	94.822	Neolamprologus_brichardi
ENSAOCG00000018004	prpf38a	97	61.184	ENSNLEG00000012592	-	67	58.824	Nomascus_leucogenys
ENSAOCG00000018004	prpf38a	93	80.690	ENSNLEG00000017999	PRPF38A	63	87.879	Nomascus_leucogenys
ENSAOCG00000018004	prpf38a	93	54.296	ENSNLEG00000033398	-	60	51.598	Nomascus_leucogenys
ENSAOCG00000018004	prpf38a	100	78.914	ENSMEUG00000003860	PRPF38A	71	84.615	Notamacropus_eugenii
ENSAOCG00000018004	prpf38a	74	88.158	ENSOPRG00000008985	PRPF38A	92	88.688	Ochotona_princeps
ENSAOCG00000018004	prpf38a	100	81.789	ENSODEG00000005869	PRPF38A	71	88.688	Octodon_degus
ENSAOCG00000018004	prpf38a	100	96.117	ENSONIG00000007816	prpf38a	100	96.117	Oreochromis_niloticus
ENSAOCG00000018004	prpf38a	75	45.064	ENSOANG00000009541	-	71	43.750	Ornithorhynchus_anatinus
ENSAOCG00000018004	prpf38a	100	81.789	ENSOCUG00000000963	PRPF38A	71	88.688	Oryctolagus_cuniculus
ENSAOCG00000018004	prpf38a	99	96.104	ENSORLG00000013485	prpf38a	99	96.104	Oryzias_latipes
ENSAOCG00000018004	prpf38a	99	96.104	ENSORLG00020002130	prpf38a	99	96.104	Oryzias_latipes_hni
ENSAOCG00000018004	prpf38a	99	95.779	ENSORLG00015021393	prpf38a	99	95.779	Oryzias_latipes_hsok
ENSAOCG00000018004	prpf38a	100	95.146	ENSOMEG00000016333	prpf38a	100	95.146	Oryzias_melastigma
ENSAOCG00000018004	prpf38a	100	81.789	ENSOGAG00000005423	PRPF38A	71	88.688	Otolemur_garnettii
ENSAOCG00000018004	prpf38a	100	81.789	ENSOARG00000005373	PRPF38A	71	88.688	Ovis_aries
ENSAOCG00000018004	prpf38a	100	81.789	ENSPPAG00000030905	PRPF38A	71	88.688	Pan_paniscus
ENSAOCG00000018004	prpf38a	93	68.041	ENSPPAG00000033867	-	68	69.231	Pan_paniscus
ENSAOCG00000018004	prpf38a	100	81.789	ENSPPRG00000013268	PRPF38A	71	88.688	Panthera_pardus
ENSAOCG00000018004	prpf38a	100	81.789	ENSPTIG00000015419	PRPF38A	71	88.688	Panthera_tigris_altaica
ENSAOCG00000018004	prpf38a	100	81.789	ENSPTRG00000000739	PRPF38A	74	88.688	Pan_troglodytes
ENSAOCG00000018004	prpf38a	100	81.789	ENSPANG00000015483	PRPF38A	71	88.688	Papio_anubis
ENSAOCG00000018004	prpf38a	100	92.880	ENSPKIG00000011439	prpf38a	95	93.197	Paramormyrops_kingsleyae
ENSAOCG00000018004	prpf38a	100	81.789	ENSPSIG00000017487	PRPF38A	71	88.688	Pelodiscus_sinensis
ENSAOCG00000018004	prpf38a	70	91.705	ENSPMGG00000021352	prpf38a	76	91.403	Periophthalmus_magnuspinnatus
ENSAOCG00000018004	prpf38a	100	81.789	ENSPEMG00000023277	-	71	88.688	Peromyscus_maniculatus_bairdii
ENSAOCG00000018004	prpf38a	100	79.683	ENSPEMG00000011212	-	100	78.730	Peromyscus_maniculatus_bairdii
ENSAOCG00000018004	prpf38a	100	79.299	ENSPCIG00000022369	-	71	85.135	Phascolarctos_cinereus
ENSAOCG00000018004	prpf38a	100	96.440	ENSPFOG00000004248	prpf38a	100	96.440	Poecilia_formosa
ENSAOCG00000018004	prpf38a	100	96.440	ENSPLAG00000010328	prpf38a	100	96.440	Poecilia_latipinna
ENSAOCG00000018004	prpf38a	100	96.440	ENSPMEG00000011804	prpf38a	100	96.440	Poecilia_mexicana
ENSAOCG00000018004	prpf38a	94	81.208	ENSPREG00000002835	prpf38a	58	98.404	Poecilia_reticulata
ENSAOCG00000018004	prpf38a	100	73.899	ENSPPYG00000001348	PRPF38A	71	77.434	Pongo_abelii
ENSAOCG00000018004	prpf38a	100	82.109	ENSPCAG00000013328	PRPF38A	71	89.140	Procavia_capensis
ENSAOCG00000018004	prpf38a	100	66.990	ENSPCOG00000020709	-	73	71.493	Propithecus_coquereli
ENSAOCG00000018004	prpf38a	100	81.789	ENSPCOG00000016387	-	71	88.688	Propithecus_coquereli
ENSAOCG00000018004	prpf38a	100	81.789	ENSPVAG00000009803	PRPF38A	71	88.688	Pteropus_vampyrus
ENSAOCG00000018004	prpf38a	100	97.087	ENSPNYG00000005571	prpf38a	100	97.087	Pundamilia_nyererei
ENSAOCG00000018004	prpf38a	100	84.984	ENSPNAG00000010399	prpf38a	100	93.291	Pygocentrus_nattereri
ENSAOCG00000018004	prpf38a	100	82.109	ENSRNOG00000009451	Prpf38a	71	89.140	Rattus_norvegicus
ENSAOCG00000018004	prpf38a	100	81.789	ENSRBIG00000036442	PRPF38A	74	88.688	Rhinopithecus_bieti
ENSAOCG00000018004	prpf38a	98	70.164	ENSRROG00000040003	-	72	72.398	Rhinopithecus_roxellana
ENSAOCG00000018004	prpf38a	100	81.789	ENSRROG00000032788	PRPF38A	71	88.688	Rhinopithecus_roxellana
ENSAOCG00000018004	prpf38a	100	81.789	ENSSBOG00000019515	PRPF38A	71	88.688	Saimiri_boliviensis_boliviensis
ENSAOCG00000018004	prpf38a	96	65.552	ENSSHAG00000006029	-	74	75.566	Sarcophilus_harrisii
ENSAOCG00000018004	prpf38a	86	76.471	ENSSHAG00000006906	-	66	82.222	Sarcophilus_harrisii
ENSAOCG00000018004	prpf38a	100	92.581	ENSSFOG00015013572	prpf38a	95	91.186	Scleropages_formosus
ENSAOCG00000018004	prpf38a	72	96.380	ENSSMAG00000015379	prpf38a	95	95.918	Scophthalmus_maximus
ENSAOCG00000018004	prpf38a	100	98.058	ENSSDUG00000001324	prpf38a	100	98.058	Seriola_dumerili
ENSAOCG00000018004	prpf38a	100	98.058	ENSSLDG00000014803	prpf38a	100	98.058	Seriola_lalandi_dorsalis
ENSAOCG00000018004	prpf38a	100	65.176	ENSSARG00000014458	PRPF38A	71	65.158	Sorex_araneus
ENSAOCG00000018004	prpf38a	100	81.470	ENSSPUG00000013259	PRPF38A	71	88.235	Sphenodon_punctatus
ENSAOCG00000018004	prpf38a	100	84.466	ENSSPAG00000010449	prpf38a	100	84.466	Stegastes_partitus
ENSAOCG00000018004	prpf38a	100	81.789	ENSSSCG00000028288	PRPF38A	71	88.688	Sus_scrofa
ENSAOCG00000018004	prpf38a	100	78.914	ENSTGUG00000008995	PRPF38A	71	84.615	Taeniopygia_guttata
ENSAOCG00000018004	prpf38a	72	95.475	ENSTRUG00000003374	prpf38a	78	95.276	Takifugu_rubripes
ENSAOCG00000018004	prpf38a	100	94.212	ENSTNIG00000005533	prpf38a	100	94.212	Tetraodon_nigroviridis
ENSAOCG00000018004	prpf38a	100	81.150	ENSTBEG00000000725	PRPF38A	71	88.688	Tupaia_belangeri
ENSAOCG00000018004	prpf38a	100	81.789	ENSTTRG00000016139	PRPF38A	71	88.688	Tursiops_truncatus
ENSAOCG00000018004	prpf38a	100	81.789	ENSUAMG00000000625	PRPF38A	71	88.688	Ursus_americanus
ENSAOCG00000018004	prpf38a	100	81.789	ENSUMAG00000022674	PRPF38A	71	88.688	Ursus_maritimus
ENSAOCG00000018004	prpf38a	75	87.446	ENSVPAG00000000907	PRPF38A	71	88.235	Vicugna_pacos
ENSAOCG00000018004	prpf38a	100	81.789	ENSVVUG00000004475	PRPF38A	71	88.688	Vulpes_vulpes
ENSAOCG00000018004	prpf38a	100	81.210	ENSXETG00000008060	prpf38a	71	87.330	Xenopus_tropicalis
ENSAOCG00000018004	prpf38a	72	94.619	ENSXCOG00000007393	prpf38a	74	94.619	Xiphophorus_couchianus
ENSAOCG00000018004	prpf38a	100	96.440	ENSXMAG00000026143	prpf38a	100	96.440	Xiphophorus_maculatus