EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAOCG00000018049 (Gene tree)
Gene ID: 111580423
Gene Symbol: -
Alias: -
Full Name: RNA exonuclease 1 homolog
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Plus strand
Length: 13150 bases
Position: chrNXFZ01003577.1:460421-473570
Accession: 111580423
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000028415	RNase_T	PF00929.24	1.1e-06	1	1
ENSAOCP00000028423	RNase_T	PF00929.24	2.4e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000021500	-	2958	-	ENSAOCP00000028423	985 (aa)	-	-
ENSAOCT00000021531	-	4454	XM_023288154	ENSAOCP00000028415	1134 (aa)	XP_023143922	-

Gene Model

Click here to download ENSAOCG00000018049's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000018049's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000018049	-	88	83.032	ENSAPOG00000005095	zgc:152968	100	86.571	Acanthochromis_polyacanthus
ENSAOCG00000018049	-	93	77.941	ENSACIG00000002527	zgc:152968	98	81.311	Amphilophus_citrinellus
ENSAOCG00000018049	-	95	98.646	ENSAPEG00000012559	zgc:152968	93	98.646	Amphiprion_percula
ENSAOCG00000018049	-	99	74.878	ENSACLG00000020524	-	98	80.049	Astatotilapia_calliptera
ENSAOCG00000018049	-	93	72.637	ENSCVAG00000015400	zgc:152968	100	76.528	Cyprinodon_variegatus
ENSAOCG00000018049	-	70	64.286	ENSDARG00000037002	zgc:152968	58	64.286	Danio_rerio
ENSAOCG00000018049	-	98	63.443	ENSELUG00000014272	zgc:152968	84	63.443	Esox_lucius
ENSAOCG00000018049	-	98	69.024	ENSFHEG00000003641	-	98	66.981	Fundulus_heteroclitus
ENSAOCG00000018049	-	87	85.909	ENSGAFG00000016810	-	93	69.201	Gambusia_affinis
ENSAOCG00000018049	-	97	73.560	ENSHBUG00000007524	-	98	59.932	Haplochromis_burtoni
ENSAOCG00000018049	-	79	63.527	ENSIPUG00000004633	zgc:152968	95	63.527	Ictalurus_punctatus
ENSAOCG00000018049	-	84	71.257	ENSLBEG00000026485	zgc:152968	99	71.257	Labrus_bergylta
ENSAOCG00000018049	-	98	66.516	ENSMAMG00000005920	-	89	66.516	Mastacembelus_armatus
ENSAOCG00000018049	-	99	74.634	ENSMZEG00005013783	-	98	78.345	Maylandia_zebra
ENSAOCG00000018049	-	82	74.442	ENSMMOG00000018072	zgc:152968	100	77.088	Mola_mola
ENSAOCG00000018049	-	85	74.694	ENSMALG00000003536	-	99	74.694	Monopterus_albus
ENSAOCG00000018049	-	99	73.544	ENSONIG00000016897	-	88	74.447	Oreochromis_niloticus
ENSAOCG00000018049	-	73	70.370	ENSORLG00020012504	-	87	70.370	Oryzias_latipes_hni
ENSAOCG00000018049	-	78	58.769	ENSOMEG00000008840	-	86	58.462	Oryzias_melastigma
ENSAOCG00000018049	-	98	71.084	ENSPFOG00000006104	-	100	54.431	Poecilia_formosa
ENSAOCG00000018049	-	98	72.127	ENSPLAG00000005034	-	97	74.645	Poecilia_latipinna
ENSAOCG00000018049	-	98	71.883	ENSPMEG00000018012	-	100	54.992	Poecilia_mexicana
ENSAOCG00000018049	-	98	72.372	ENSPREG00000007481	-	98	68.293	Poecilia_reticulata
ENSAOCG00000018049	-	50	60.870	ENSSFOG00015023869	zgc:152968	63	61.743	Scleropages_formosus
ENSAOCG00000018049	-	98	72.705	ENSSMAG00000008149	-	100	61.034	Scophthalmus_maximus
ENSAOCG00000018049	-	99	76.214	ENSSDUG00000022323	-	96	76.214	Seriola_dumerili
ENSAOCG00000018049	-	94	59.358	ENSSLDG00000018799	zgc:152968	97	59.626	Seriola_lalandi_dorsalis
ENSAOCG00000018049	-	84	77.299	ENSSPAG00000007632	-	96	77.299	Stegastes_partitus
ENSAOCG00000018049	-	98	69.903	ENSTRUG00000025441	zgc:152968	100	53.968	Takifugu_rubripes
ENSAOCG00000018049	-	98	72.439	ENSXMAG00000026483	-	100	54.676	Xiphophorus_maculatus