EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAOCG00000018088 (Gene tree)
Gene ID: 111569198
Gene Symbol: bms1
Alias: bms1l|im:7152071|wu:fb37d08
Full Name: BMS1%2C ribosome biogenesis factor
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Minus strand
Length: 23357 bases
Position: chrNXFZ01002303.1:47048-70404
Accession: 111569198
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000013456	AARP2CN	PF08142.12	6.9e-31	1	1
ENSAOCP00000013476	AARP2CN	PF08142.12	7.2e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000021534	-	4128	XM_023271211	ENSAOCP00000013476	1217 (aa)	XP_023126979	UPI000C316141
ENSAOCT00000021525	-	3564	-	ENSAOCP00000013456	1187 (aa)	-	-

Gene Model

Click here to download ENSAOCG00000018088's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000018088's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000018088	bms1	54	66.258	ENSG00000165733	BMS1	83	70.753	Homo_sapiens
ENSAOCG00000018088	bms1	88	97.095	ENSAPOG00000002296	bms1	100	97.095	Acanthochromis_polyacanthus
ENSAOCG00000018088	bms1	99	61.772	ENSAMEG00000016834	BMS1	87	68.174	Ailuropoda_melanoleuca
ENSAOCG00000018088	bms1	100	80.032	ENSACIG00000002588	bms1	99	80.265	Amphilophus_citrinellus
ENSAOCG00000018088	bms1	100	99.260	ENSAPEG00000014673	bms1	100	99.260	Amphiprion_percula
ENSAOCG00000018088	bms1	100	83.333	ENSATEG00000023465	bms1	100	83.617	Anabas_testudineus
ENSAOCG00000018088	bms1	95	62.693	ENSAPLG00000003759	BMS1	83	70.973	Anas_platyrhynchos
ENSAOCG00000018088	bms1	97	64.148	ENSACAG00000004537	-	83	68.951	Anolis_carolinensis
ENSAOCG00000018088	bms1	51	67.846	ENSANAG00000023432	BMS1	83	71.058	Aotus_nancymaae
ENSAOCG00000018088	bms1	100	82.923	ENSACLG00000001294	bms1	100	83.019	Astatotilapia_calliptera
ENSAOCG00000018088	bms1	51	76.886	ENSAMXG00000011236	bms1	50	77.316	Astyanax_mexicanus
ENSAOCG00000018088	bms1	99	62.173	ENSBTAG00000012878	BMS1	86	69.368	Bos_taurus
ENSAOCG00000018088	bms1	84	52.826	WBGene00022021	Y61A9LA.10	93	54.593	Caenorhabditis_elegans
ENSAOCG00000018088	bms1	54	66.361	ENSCJAG00000021705	BMS1	86	68.893	Callithrix_jacchus
ENSAOCG00000018088	bms1	54	65.257	ENSCAFG00000007114	BMS1	84	70.913	Canis_familiaris
ENSAOCG00000018088	bms1	54	65.257	ENSCAFG00020025282	BMS1	84	70.913	Canis_lupus_dingo
ENSAOCG00000018088	bms1	99	61.598	ENSCHIG00000023251	BMS1	81	74.478	Capra_hircus
ENSAOCG00000018088	bms1	99	58.810	ENSCAPG00000008652	BMS1	83	69.717	Cavia_aperea
ENSAOCG00000018088	bms1	99	62.072	ENSCPOG00000000502	BMS1	83	70.806	Cavia_porcellus
ENSAOCG00000018088	bms1	99	51.651	ENSCCAG00000024969	-	83	59.217	Cebus_capucinus
ENSAOCG00000018088	bms1	89	47.382	ENSCATG00000008695	-	72	59.142	Cercocebus_atys
ENSAOCG00000018088	bms1	54	66.055	ENSCATG00000030625	-	86	68.780	Cercocebus_atys
ENSAOCG00000018088	bms1	54	65.902	ENSCSAG00000011118	BMS1	86	68.943	Chlorocebus_sabaeus
ENSAOCG00000018088	bms1	55	61.626	ENSCHOG00000011055	BMS1	86	68.071	Choloepus_hoffmanni
ENSAOCG00000018088	bms1	99	61.550	ENSCPBG00000025581	BMS1	83	69.243	Chrysemys_picta_bellii
ENSAOCG00000018088	bms1	83	62.626	ENSCING00000003181	-	94	63.926	Ciona_intestinalis
ENSAOCG00000018088	bms1	72	53.647	ENSCSAVG00000004113	-	89	53.333	Ciona_savignyi
ENSAOCG00000018088	bms1	54	66.361	ENSCANG00000011609	BMS1	85	70.613	Colobus_angolensis_palliatus
ENSAOCG00000018088	bms1	99	62.559	ENSCGRG00001019461	Bms1	86	69.262	Cricetulus_griseus_chok1gshd
ENSAOCG00000018088	bms1	99	62.559	ENSCGRG00000009016	Bms1	86	69.262	Cricetulus_griseus_crigri
ENSAOCG00000018088	bms1	99	78.125	ENSCSEG00000002469	bms1	99	78.094	Cynoglossus_semilaevis
ENSAOCG00000018088	bms1	100	81.663	ENSCVAG00000008371	bms1	100	81.633	Cyprinodon_variegatus
ENSAOCG00000018088	bms1	99	73.198	ENSDARG00000054154	bms1	99	73.448	Danio_rerio
ENSAOCG00000018088	bms1	99	61.270	ENSDNOG00000015761	BMS1	83	70.701	Dasypus_novemcinctus
ENSAOCG00000018088	bms1	88	61.275	FBgn0036686	CG7728	89	62.663	Drosophila_melanogaster
ENSAOCG00000018088	bms1	84	68.750	ENSETEG00000009554	BMS1	74	69.612	Echinops_telfairi
ENSAOCG00000018088	bms1	99	62.238	ENSECAG00000001358	BMS1	86	68.720	Equus_caballus
ENSAOCG00000018088	bms1	100	74.394	ENSELUG00000001756	bms1	74	87.989	Esox_lucius
ENSAOCG00000018088	bms1	99	61.753	ENSFCAG00000011220	BMS1	86	68.669	Felis_catus
ENSAOCG00000018088	bms1	99	65.702	ENSFALG00000006882	BMS1	82	70.386	Ficedula_albicollis
ENSAOCG00000018088	bms1	100	81.982	ENSFHEG00000003367	bms1	100	80.753	Fundulus_heteroclitus
ENSAOCG00000018088	bms1	99	72.111	ENSGMOG00000000718	bms1	53	79.187	Gadus_morhua
ENSAOCG00000018088	bms1	99	62.366	ENSGALG00000002624	BMS1	85	69.952	Gallus_gallus
ENSAOCG00000018088	bms1	99	84.076	ENSGACG00000015334	bms1	89	83.758	Gasterosteus_aculeatus
ENSAOCG00000018088	bms1	99	63.301	ENSGAGG00000003467	BMS1	88	68.800	Gopherus_agassizii
ENSAOCG00000018088	bms1	100	82.594	ENSHBUG00000022628	bms1	100	82.691	Haplochromis_burtoni
ENSAOCG00000018088	bms1	99	61.875	ENSHGLG00000000477	BMS1	87	68.395	Heterocephalus_glaber_female
ENSAOCG00000018088	bms1	99	62.109	ENSHGLG00100002176	BMS1	87	68.395	Heterocephalus_glaber_male
ENSAOCG00000018088	bms1	99	79.282	ENSHCOG00000017604	bms1	99	79.066	Hippocampus_comes
ENSAOCG00000018088	bms1	99	71.767	ENSIPUG00000017855	bms1	92	75.266	Ictalurus_punctatus
ENSAOCG00000018088	bms1	99	61.598	ENSSTOG00000015063	BMS1	87	68.526	Ictidomys_tridecemlineatus
ENSAOCG00000018088	bms1	66	76.904	ENSKMAG00000021982	bms1	97	74.532	Kryptolebias_marmoratus
ENSAOCG00000018088	bms1	100	79.739	ENSLBEG00000028208	bms1	100	78.887	Labrus_bergylta
ENSAOCG00000018088	bms1	99	58.745	ENSLACG00000001600	BMS1	86	70.043	Latimeria_chalumnae
ENSAOCG00000018088	bms1	52	77.251	ENSLOCG00000012914	bms1	99	71.012	Lepisosteus_oculatus
ENSAOCG00000018088	bms1	99	60.125	ENSLAFG00000006250	BMS1	84	69.703	Loxodonta_africana
ENSAOCG00000018088	bms1	87	67.179	ENSMFAG00000037771	BMS1	91	70.339	Macaca_fascicularis
ENSAOCG00000018088	bms1	76	55.746	ENSMLEG00000029084	-	71	57.834	Mandrillus_leucophaeus
ENSAOCG00000018088	bms1	100	81.270	ENSMAMG00000020855	bms1	100	80.685	Mastacembelus_armatus
ENSAOCG00000018088	bms1	100	82.841	ENSMZEG00005005663	bms1	100	82.937	Maylandia_zebra
ENSAOCG00000018088	bms1	95	62.008	ENSMGAG00000001170	BMS1	83	71.084	Meleagris_gallopavo
ENSAOCG00000018088	bms1	99	62.234	ENSMAUG00000002195	Bms1	86	69.262	Mesocricetus_auratus
ENSAOCG00000018088	bms1	99	60.799	ENSMICG00000009977	BMS1	84	69.979	Microcebus_murinus
ENSAOCG00000018088	bms1	53	65.688	ENSMOCG00000002038	Bms1	84	69.979	Microtus_ochrogaster
ENSAOCG00000018088	bms1	100	80.147	ENSMMOG00000000977	bms1	99	81.276	Mola_mola
ENSAOCG00000018088	bms1	99	61.183	ENSMODG00000001177	BMS1	83	69.915	Monodelphis_domestica
ENSAOCG00000018088	bms1	100	83.797	ENSMALG00000009680	bms1	100	82.406	Monopterus_albus
ENSAOCG00000018088	bms1	73	75.689	MGP_CAROLIEiJ_G0028785	-	76	75.122	Mus_caroli
ENSAOCG00000018088	bms1	99	60.893	ENSMUSG00000030138	Bms1	85	70.316	Mus_musculus
ENSAOCG00000018088	bms1	99	60.972	MGP_PahariEiJ_G0022539	Bms1	83	69.345	Mus_pahari
ENSAOCG00000018088	bms1	99	60.737	MGP_SPRETEiJ_G0029816	Bms1	85	69.895	Mus_spretus
ENSAOCG00000018088	bms1	99	62.016	ENSMLUG00000003260	BMS1	84	69.895	Myotis_lucifugus
ENSAOCG00000018088	bms1	99	57.027	ENSNGAG00000015258	Bms1	90	68.226	Nannospalax_galili
ENSAOCG00000018088	bms1	54	64.526	ENSNLEG00000015791	BMS1	83	70.905	Nomascus_leucogenys
ENSAOCG00000018088	bms1	86	73.882	ENSOPRG00000005195	BMS1	81	73.882	Ochotona_princeps
ENSAOCG00000018088	bms1	99	61.813	ENSODEG00000005554	BMS1	84	69.851	Octodon_degus
ENSAOCG00000018088	bms1	100	83.005	ENSONIG00000007227	bms1	100	82.801	Oreochromis_niloticus
ENSAOCG00000018088	bms1	99	60.678	ENSOANG00000000662	-	83	69.114	Ornithorhynchus_anatinus
ENSAOCG00000018088	bms1	99	62.077	ENSOCUG00000005354	BMS1	86	69.206	Oryctolagus_cuniculus
ENSAOCG00000018088	bms1	99	80.592	ENSORLG00000014655	bms1	99	80.621	Oryzias_latipes
ENSAOCG00000018088	bms1	99	79.453	ENSORLG00020016246	bms1	79	83.068	Oryzias_latipes_hni
ENSAOCG00000018088	bms1	99	79.419	ENSORLG00015014183	bms1	99	79.636	Oryzias_latipes_hsok
ENSAOCG00000018088	bms1	99	81.019	ENSOMEG00000015042	bms1	99	80.839	Oryzias_melastigma
ENSAOCG00000018088	bms1	99	61.034	ENSOGAG00000006511	BMS1	84	70.316	Otolemur_garnettii
ENSAOCG00000018088	bms1	99	61.485	ENSOARG00000003900	BMS1	86	69.530	Ovis_aries
ENSAOCG00000018088	bms1	54	60.490	ENSPPAG00000027837	BMS1	83	70.538	Pan_paniscus
ENSAOCG00000018088	bms1	99	61.740	ENSPPRG00000001311	BMS1	86	68.506	Panthera_pardus
ENSAOCG00000018088	bms1	99	60.590	ENSPTIG00000009652	BMS1	86	68.072	Panthera_tigris_altaica
ENSAOCG00000018088	bms1	54	66.411	ENSPTRG00000002441	BMS1	83	70.323	Pan_troglodytes
ENSAOCG00000018088	bms1	96	77.760	ENSPKIG00000008165	bms1	88	77.047	Paramormyrops_kingsleyae
ENSAOCG00000018088	bms1	53	66.822	ENSPSIG00000006481	BMS1	81	71.719	Pelodiscus_sinensis
ENSAOCG00000018088	bms1	66	67.846	ENSPCIG00000001339	BMS1	81	72.958	Phascolarctos_cinereus
ENSAOCG00000018088	bms1	96	82.560	ENSPFOG00000015180	bms1	99	79.093	Poecilia_formosa
ENSAOCG00000018088	bms1	99	79.732	ENSPMEG00000023176	bms1	94	80.166	Poecilia_mexicana
ENSAOCG00000018088	bms1	99	79.229	ENSPREG00000002695	bms1	99	80.197	Poecilia_reticulata
ENSAOCG00000018088	bms1	72	75.510	ENSPCAG00000014528	BMS1	64	75.510	Procavia_capensis
ENSAOCG00000018088	bms1	53	64.319	ENSPCOG00000023834	-	84	67.568	Propithecus_coquereli
ENSAOCG00000018088	bms1	99	62.039	ENSPVAG00000000725	BMS1	85	70.339	Pteropus_vampyrus
ENSAOCG00000018088	bms1	100	80.551	ENSPNYG00000018866	bms1	100	80.421	Pundamilia_nyererei
ENSAOCG00000018088	bms1	53	77.591	ENSPNAG00000000676	bms1	88	79.421	Pygocentrus_nattereri
ENSAOCG00000018088	bms1	80	60.324	ENSRNOG00000006576	Bms1	81	69.792	Rattus_norvegicus
ENSAOCG00000018088	bms1	54	66.055	ENSRROG00000040101	BMS1	82	70.204	Rhinopithecus_roxellana
ENSAOCG00000018088	bms1	73	49.074	YPL217C	-	77	50.746	Saccharomyces_cerevisiae
ENSAOCG00000018088	bms1	51	68.730	ENSSBOG00000035778	BMS1	84	70.402	Saimiri_boliviensis_boliviensis
ENSAOCG00000018088	bms1	55	63.918	ENSSHAG00000005062	BMS1	82	69.362	Sarcophilus_harrisii
ENSAOCG00000018088	bms1	100	82.419	ENSSMAG00000019966	bms1	100	82.661	Scophthalmus_maximus
ENSAOCG00000018088	bms1	100	84.291	ENSSDUG00000016875	bms1	100	84.615	Seriola_dumerili
ENSAOCG00000018088	bms1	100	84.219	ENSSLDG00000015199	bms1	100	84.770	Seriola_lalandi_dorsalis
ENSAOCG00000018088	bms1	65	62.689	ENSSARG00000014407	BMS1	68	75.000	Sorex_araneus
ENSAOCG00000018088	bms1	99	66.539	ENSSSCG00000010198	BMS1	86	69.076	Sus_scrofa
ENSAOCG00000018088	bms1	94	70.513	ENSTGUG00000006302	-	82	70.436	Taeniopygia_guttata
ENSAOCG00000018088	bms1	99	72.286	ENSTRUG00000008028	bms1	53	75.566	Takifugu_rubripes
ENSAOCG00000018088	bms1	98	75.243	ENSTNIG00000006216	bms1	87	76.214	Tetraodon_nigroviridis
ENSAOCG00000018088	bms1	64	71.429	ENSTBEG00000001673	-	63	72.852	Tupaia_belangeri
ENSAOCG00000018088	bms1	99	60.601	ENSTTRG00000007983	BMS1	80	76.528	Tursiops_truncatus
ENSAOCG00000018088	bms1	99	62.266	ENSUAMG00000023996	BMS1	86	68.669	Ursus_americanus
ENSAOCG00000018088	bms1	99	62.109	ENSUMAG00000016523	BMS1	86	68.537	Ursus_maritimus
ENSAOCG00000018088	bms1	99	63.204	ENSVVUG00000021305	BMS1	84	70.913	Vulpes_vulpes
ENSAOCG00000018088	bms1	98	61.706	ENSXETG00000008158	bms1	81	67.660	Xenopus_tropicalis
ENSAOCG00000018088	bms1	99	79.866	ENSXCOG00000000506	bms1	96	90.594	Xiphophorus_couchianus
ENSAOCG00000018088	bms1	99	79.665	ENSXMAG00000014236	bms1	99	80.033	Xiphophorus_maculatus