EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAOCG00000018248 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Minus strand
Length: 5123 bases
Position: chrNXFZ01006302.1:25408-30530
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000028548	RVT_1	PF00078.27	5e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000031142	-	765	-	ENSAOCP00000028548	254 (aa)	-	-

Gene Model

Click here to download ENSAOCG00000018248's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000018248's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAOCG00000018248	-	83	40.566	ENSAOCG00000004500	-	56	40.566

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000018248	-	66	36.527	ENSACIG00000023684	-	76	36.527	Amphilophus_citrinellus
ENSAOCG00000018248	-	84	39.437	ENSACIG00000022447	-	76	39.437	Amphilophus_citrinellus
ENSAOCG00000018248	-	77	43.367	ENSACLG00000012369	-	66	43.367	Astatotilapia_calliptera
ENSAOCG00000018248	-	84	35.514	ENSACLG00000010837	-	52	35.514	Astatotilapia_calliptera
ENSAOCG00000018248	-	81	37.915	ENSAMXG00000040763	-	52	37.915	Astyanax_mexicanus
ENSAOCG00000018248	-	78	39.196	ENSCVAG00000000484	-	64	39.196	Cyprinodon_variegatus
ENSAOCG00000018248	-	76	38.342	ENSHBUG00000023598	-	71	38.342	Haplochromis_burtoni
ENSAOCG00000018248	-	83	48.113	ENSLACG00000022331	-	64	48.113	Latimeria_chalumnae
ENSAOCG00000018248	-	84	33.945	ENSMAMG00000001976	-	81	33.945	Mastacembelus_armatus
ENSAOCG00000018248	-	84	35.981	ENSMZEG00005006211	-	52	35.981	Maylandia_zebra
ENSAOCG00000018248	-	83	63.208	ENSMMOG00000003125	-	70	63.208	Mola_mola
ENSAOCG00000018248	-	83	61.792	ENSMMOG00000007110	-	76	61.792	Mola_mola
ENSAOCG00000018248	-	90	32.759	ENSNBRG00000016257	-	80	32.759	Neolamprologus_brichardi
ENSAOCG00000018248	-	83	42.925	ENSORLG00000028976	-	56	42.925	Oryzias_latipes
ENSAOCG00000018248	-	83	40.566	ENSORLG00015007976	-	56	40.566	Oryzias_latipes_hsok
ENSAOCG00000018248	-	78	35.533	ENSOMEG00000008379	-	58	37.563	Oryzias_melastigma
ENSAOCG00000018248	-	60	34.839	ENSPMGG00000010144	-	62	34.839	Periophthalmus_magnuspinnatus
ENSAOCG00000018248	-	65	30.723	ENSPMGG00000010004	-	58	30.723	Periophthalmus_magnuspinnatus
ENSAOCG00000018248	-	76	32.474	ENSPLAG00000008560	-	59	32.474	Poecilia_latipinna
ENSAOCG00000018248	-	83	43.396	ENSPMEG00000003715	-	71	43.396	Poecilia_mexicana
ENSAOCG00000018248	-	64	42.945	ENSPNYG00000022953	-	71	42.945	Pundamilia_nyererei
ENSAOCG00000018248	-	88	57.895	ENSPNYG00000012547	-	74	57.895	Pundamilia_nyererei
ENSAOCG00000018248	-	73	34.555	ENSPNYG00000006014	-	74	34.555	Pundamilia_nyererei
ENSAOCG00000018248	-	68	42.045	ENSPNYG00000000591	-	80	42.045	Pundamilia_nyererei
ENSAOCG00000018248	-	83	40.094	ENSPNAG00000014375	-	52	40.094	Pygocentrus_nattereri
ENSAOCG00000018248	-	75	54.211	ENSSLDG00000008400	-	78	54.211	Seriola_lalandi_dorsalis
ENSAOCG00000018248	-	77	31.472	ENSXETG00000031743	-	78	31.472	Xenopus_tropicalis
ENSAOCG00000018248	-	58	44.595	ENSXCOG00000013172	-	67	44.595	Xiphophorus_couchianus