EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAOCG00000018283 (Gene tree)
Gene ID: 111581616
Gene Symbol: rnf17
Alias: TDRD4|im:7147535|wu:fj98c04
Full Name: ring finger protein 17
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Minus strand
Length: 31083 bases
Position: chrNXFZ01001410.1:173530-204612
Accession: 111581616
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000013712	TUDOR	PF00567.24	1.9e-81	1	5
ENSAOCP00000013712	TUDOR	PF00567.24	1.9e-81	2	5
ENSAOCP00000013712	TUDOR	PF00567.24	1.9e-81	3	5
ENSAOCP00000013712	TUDOR	PF00567.24	1.9e-81	4	5
ENSAOCP00000013712	TUDOR	PF00567.24	1.9e-81	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000021822	-	6740	XM_023289864	ENSAOCP00000013712	1587 (aa)	XP_023145632	UPI000C30A347

Gene Model

Click here to download ENSAOCG00000018283's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000018283's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAOCG00000018283	rnf17	74	32.653	ENSAOCG00000013365	tdrd6	58	32.653

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000018283	rnf17	98	32.750	ENSG00000132972	RNF17	99	37.345	Homo_sapiens
ENSAOCG00000018283	rnf17	90	85.558	ENSAPOG00000017034	rnf17	97	85.558	Acanthochromis_polyacanthus
ENSAOCG00000018283	rnf17	98	32.069	ENSAMEG00000017340	RNF17	97	31.810	Ailuropoda_melanoleuca
ENSAOCG00000018283	rnf17	96	78.526	ENSAPEG00000022338	rnf17	93	97.531	Amphiprion_percula
ENSAOCG00000018283	rnf17	90	69.433	ENSATEG00000002067	rnf17	99	68.741	Anabas_testudineus
ENSAOCG00000018283	rnf17	87	31.906	ENSAPLG00000003969	RNF17	98	32.178	Anas_platyrhynchos
ENSAOCG00000018283	rnf17	92	33.816	ENSACAG00000001418	RNF17	93	33.597	Anolis_carolinensis
ENSAOCG00000018283	rnf17	96	30.076	ENSANAG00000029969	RNF17	94	31.719	Aotus_nancymaae
ENSAOCG00000018283	rnf17	100	72.073	ENSACLG00000018279	rnf17	100	72.073	Astatotilapia_calliptera
ENSAOCG00000018283	rnf17	91	49.026	ENSAMXG00000011002	rnf17	99	48.861	Astyanax_mexicanus
ENSAOCG00000018283	rnf17	55	35.552	ENSBTAG00000000278	RNF17	98	39.706	Bos_taurus
ENSAOCG00000018283	rnf17	98	32.141	ENSCJAG00000018937	RNF17	98	36.446	Callithrix_jacchus
ENSAOCG00000018283	rnf17	95	32.136	ENSCAFG00000007418	RNF17	96	31.790	Canis_familiaris
ENSAOCG00000018283	rnf17	50	40.670	ENSCAFG00020002919	-	98	34.933	Canis_lupus_dingo
ENSAOCG00000018283	rnf17	91	33.527	ENSCHIG00000026716	RNF17	98	39.706	Capra_hircus
ENSAOCG00000018283	rnf17	98	31.988	ENSTSYG00000000365	RNF17	97	35.982	Carlito_syrichta
ENSAOCG00000018283	rnf17	74	30.456	ENSCAPG00000012908	RNF17	89	30.428	Cavia_aperea
ENSAOCG00000018283	rnf17	98	31.910	ENSCCAG00000026725	RNF17	97	35.821	Cebus_capucinus
ENSAOCG00000018283	rnf17	98	32.044	ENSCATG00000040352	RNF17	98	36.811	Cercocebus_atys
ENSAOCG00000018283	rnf17	98	32.988	ENSCLAG00000004127	RNF17	97	32.606	Chinchilla_lanigera
ENSAOCG00000018283	rnf17	98	32.374	ENSCSAG00000018019	RNF17	97	32.733	Chlorocebus_sabaeus
ENSAOCG00000018283	rnf17	52	47.761	ENSCHOG00000013310	RNF17	57	47.761	Choloepus_hoffmanni
ENSAOCG00000018283	rnf17	94	33.269	ENSCPBG00000020920	RNF17	98	33.376	Chrysemys_picta_bellii
ENSAOCG00000018283	rnf17	98	32.326	ENSCANG00000032927	RNF17	98	36.662	Colobus_angolensis_palliatus
ENSAOCG00000018283	rnf17	99	32.320	ENSCGRG00001022658	Rnf17	98	32.669	Cricetulus_griseus_chok1gshd
ENSAOCG00000018283	rnf17	99	32.320	ENSCGRG00000009924	Rnf17	98	32.669	Cricetulus_griseus_crigri
ENSAOCG00000018283	rnf17	100	52.872	ENSCSEG00000008626	rnf17	96	55.922	Cynoglossus_semilaevis
ENSAOCG00000018283	rnf17	73	65.254	ENSCVAG00000017008	rnf17	95	65.254	Cyprinodon_variegatus
ENSAOCG00000018283	rnf17	99	44.959	ENSDARG00000056387	rnf17	95	48.191	Danio_rerio
ENSAOCG00000018283	rnf17	98	31.688	ENSDNOG00000006115	RNF17	97	31.611	Dasypus_novemcinctus
ENSAOCG00000018283	rnf17	55	31.121	ENSEASG00005001421	-	98	38.235	Equus_asinus_asinus
ENSAOCG00000018283	rnf17	98	32.128	ENSECAG00000017152	RNF17	96	32.180	Equus_caballus
ENSAOCG00000018283	rnf17	59	31.780	ENSEEUG00000000332	RNF17	66	30.142	Erinaceus_europaeus
ENSAOCG00000018283	rnf17	99	51.330	ENSELUG00000005626	rnf17	99	51.042	Esox_lucius
ENSAOCG00000018283	rnf17	98	32.380	ENSFCAG00000004914	RNF17	98	35.277	Felis_catus
ENSAOCG00000018283	rnf17	77	34.311	ENSFALG00000008766	RNF17	80	34.098	Ficedula_albicollis
ENSAOCG00000018283	rnf17	98	30.912	ENSFDAG00000017857	RNF17	97	31.043	Fukomys_damarensis
ENSAOCG00000018283	rnf17	99	63.699	ENSFHEG00000014822	rnf17	99	63.699	Fundulus_heteroclitus
ENSAOCG00000018283	rnf17	50	37.118	ENSGALG00000045414	-	96	37.118	Gallus_gallus
ENSAOCG00000018283	rnf17	79	66.102	ENSGAFG00000004463	rnf17	97	66.102	Gambusia_affinis
ENSAOCG00000018283	rnf17	91	32.612	ENSGAGG00000016999	RNF17	91	32.750	Gopherus_agassizii
ENSAOCG00000018283	rnf17	98	32.256	ENSGGOG00000014491	RNF17	98	36.513	Gorilla_gorilla
ENSAOCG00000018283	rnf17	100	72.260	ENSHBUG00000003554	rnf17	100	72.260	Haplochromis_burtoni
ENSAOCG00000018283	rnf17	98	31.461	ENSHGLG00000007270	RNF17	97	31.595	Heterocephalus_glaber_female
ENSAOCG00000018283	rnf17	98	31.547	ENSHGLG00100017393	RNF17	97	31.560	Heterocephalus_glaber_male
ENSAOCG00000018283	rnf17	81	49.789	ENSHCOG00000017676	rnf17	94	49.789	Hippocampus_comes
ENSAOCG00000018283	rnf17	87	50.891	ENSIPUG00000001087	rnf17	92	50.806	Ictalurus_punctatus
ENSAOCG00000018283	rnf17	62	33.828	ENSSTOG00000011255	-	98	33.481	Ictidomys_tridecemlineatus
ENSAOCG00000018283	rnf17	98	32.371	ENSJJAG00000016584	Rnf17	97	32.187	Jaculus_jaculus
ENSAOCG00000018283	rnf17	99	68.244	ENSKMAG00000013403	rnf17	99	68.306	Kryptolebias_marmoratus
ENSAOCG00000018283	rnf17	90	63.082	ENSLBEG00000014910	rnf17	96	62.740	Labrus_bergylta
ENSAOCG00000018283	rnf17	70	34.462	ENSLACG00000000323	RNF17	97	34.399	Latimeria_chalumnae
ENSAOCG00000018283	rnf17	100	37.508	ENSLOCG00000010768	rnf17	99	37.546	Lepisosteus_oculatus
ENSAOCG00000018283	rnf17	98	32.225	ENSMFAG00000032388	RNF17	98	36.960	Macaca_fascicularis
ENSAOCG00000018283	rnf17	98	32.367	ENSMMUG00000014610	RNF17	98	36.960	Macaca_mulatta
ENSAOCG00000018283	rnf17	98	32.225	ENSMNEG00000011234	RNF17	98	36.960	Macaca_nemestrina
ENSAOCG00000018283	rnf17	98	32.068	ENSMLEG00000030227	RNF17	97	32.244	Mandrillus_leucophaeus
ENSAOCG00000018283	rnf17	87	63.328	ENSMAMG00000020403	rnf17	99	63.328	Mastacembelus_armatus
ENSAOCG00000018283	rnf17	100	72.198	ENSMZEG00005019166	rnf17	100	72.198	Maylandia_zebra
ENSAOCG00000018283	rnf17	77	33.884	ENSMGAG00000015138	RNF17	99	33.884	Meleagris_gallopavo
ENSAOCG00000018283	rnf17	99	31.906	ENSMAUG00000004788	Rnf17	98	31.782	Mesocricetus_auratus
ENSAOCG00000018283	rnf17	98	32.419	ENSMICG00000010364	RNF17	97	35.672	Microcebus_murinus
ENSAOCG00000018283	rnf17	60	36.067	ENSMOCG00000011818	-	99	36.240	Microtus_ochrogaster
ENSAOCG00000018283	rnf17	79	76.471	ENSMMOG00000019514	rnf17	90	76.471	Mola_mola
ENSAOCG00000018283	rnf17	98	33.453	ENSMODG00000007827	RNF17	96	33.273	Monodelphis_domestica
ENSAOCG00000018283	rnf17	89	62.621	ENSMALG00000016943	rnf17	99	61.842	Monopterus_albus
ENSAOCG00000018283	rnf17	99	32.600	MGP_CAROLIEiJ_G0019337	Rnf17	99	32.555	Mus_caroli
ENSAOCG00000018283	rnf17	99	32.641	ENSMUSG00000000365	Rnf17	99	32.597	Mus_musculus
ENSAOCG00000018283	rnf17	99	32.579	MGP_PahariEiJ_G0030355	Rnf17	99	32.576	Mus_pahari
ENSAOCG00000018283	rnf17	99	32.598	MGP_SPRETEiJ_G0020228	Rnf17	99	32.553	Mus_spretus
ENSAOCG00000018283	rnf17	98	32.250	ENSMPUG00000013305	RNF17	97	31.710	Mustela_putorius_furo
ENSAOCG00000018283	rnf17	89	35.233	ENSMLUG00000003903	RNF17	97	31.045	Myotis_lucifugus
ENSAOCG00000018283	rnf17	98	33.394	ENSNGAG00000013553	Rnf17	97	33.211	Nannospalax_galili
ENSAOCG00000018283	rnf17	79	72.147	ENSNBRG00000012006	rnf17	92	71.603	Neolamprologus_brichardi
ENSAOCG00000018283	rnf17	98	32.162	ENSNLEG00000013780	RNF17	98	35.928	Nomascus_leucogenys
ENSAOCG00000018283	rnf17	55	42.254	ENSMEUG00000003276	-	53	42.254	Notamacropus_eugenii
ENSAOCG00000018283	rnf17	59	43.836	ENSOPRG00000016743	-	52	43.836	Ochotona_princeps
ENSAOCG00000018283	rnf17	100	71.777	ENSONIG00000015746	rnf17	100	71.652	Oreochromis_niloticus
ENSAOCG00000018283	rnf17	98	31.639	ENSOCUG00000007384	RNF17	97	31.716	Oryctolagus_cuniculus
ENSAOCG00000018283	rnf17	89	58.033	ENSORLG00000012818	rnf17	99	58.003	Oryzias_latipes
ENSAOCG00000018283	rnf17	99	58.018	ENSORLG00020009879	-	99	57.928	Oryzias_latipes_hni
ENSAOCG00000018283	rnf17	99	57.702	ENSORLG00015013027	-	99	57.675	Oryzias_latipes_hsok
ENSAOCG00000018283	rnf17	76	61.345	ENSOMEG00000009891	rnf17	97	60.163	Oryzias_melastigma
ENSAOCG00000018283	rnf17	98	31.678	ENSOGAG00000014803	RNF17	97	31.780	Otolemur_garnettii
ENSAOCG00000018283	rnf17	98	31.915	ENSOARG00000014641	RNF17	99	32.058	Ovis_aries
ENSAOCG00000018283	rnf17	77	36.025	ENSPPAG00000028779	RNF17	98	36.826	Pan_paniscus
ENSAOCG00000018283	rnf17	98	32.460	ENSPPRG00000009230	RNF17	98	35.575	Panthera_pardus
ENSAOCG00000018283	rnf17	98	32.502	ENSPTIG00000001738	RNF17	98	35.277	Panthera_tigris_altaica
ENSAOCG00000018283	rnf17	98	32.665	ENSPTRG00000005713	RNF17	98	36.677	Pan_troglodytes
ENSAOCG00000018283	rnf17	98	32.532	ENSPANG00000007640	RNF17	98	36.811	Papio_anubis
ENSAOCG00000018283	rnf17	77	45.793	ENSPKIG00000001648	rnf17	93	45.624	Paramormyrops_kingsleyae
ENSAOCG00000018283	rnf17	74	37.255	ENSPSIG00000011245	RNF17	99	37.727	Pelodiscus_sinensis
ENSAOCG00000018283	rnf17	98	32.746	ENSPEMG00000008693	Rnf17	97	32.884	Peromyscus_maniculatus_bairdii
ENSAOCG00000018283	rnf17	71	34.395	ENSPCIG00000009190	-	95	34.110	Phascolarctos_cinereus
ENSAOCG00000018283	rnf17	99	64.975	ENSPFOG00000007124	rnf17	99	64.768	Poecilia_formosa
ENSAOCG00000018283	rnf17	99	65.979	ENSPLAG00000006198	rnf17	99	65.457	Poecilia_latipinna
ENSAOCG00000018283	rnf17	99	66.167	ENSPMEG00000022432	rnf17	99	65.645	Poecilia_mexicana
ENSAOCG00000018283	rnf17	81	65.079	ENSPREG00000001414	rnf17	91	65.079	Poecilia_reticulata
ENSAOCG00000018283	rnf17	98	32.063	ENSPPYG00000005215	RNF17	97	32.264	Pongo_abelii
ENSAOCG00000018283	rnf17	61	38.164	ENSPCAG00000002665	RNF17	65	38.164	Procavia_capensis
ENSAOCG00000018283	rnf17	71	47.059	ENSPVAG00000013021	RNF17	73	47.059	Pteropus_vampyrus
ENSAOCG00000018283	rnf17	90	49.368	ENSPNAG00000027505	rnf17	99	52.534	Pygocentrus_nattereri
ENSAOCG00000018283	rnf17	98	32.333	ENSRNOG00000008059	Rnf17	76	35.669	Rattus_norvegicus
ENSAOCG00000018283	rnf17	98	32.022	ENSRBIG00000027010	RNF17	97	32.240	Rhinopithecus_bieti
ENSAOCG00000018283	rnf17	98	32.548	ENSRROG00000022801	RNF17	98	37.015	Rhinopithecus_roxellana
ENSAOCG00000018283	rnf17	87	35.945	ENSSBOG00000021661	RNF17	97	36.119	Saimiri_boliviensis_boliviensis
ENSAOCG00000018283	rnf17	98	32.911	ENSSHAG00000005609	RNF17	97	32.731	Sarcophilus_harrisii
ENSAOCG00000018283	rnf17	74	44.801	ENSSFOG00015023037	rnf17	89	45.055	Scleropages_formosus
ENSAOCG00000018283	rnf17	91	63.569	ENSSMAG00000007429	rnf17	98	63.069	Scophthalmus_maximus
ENSAOCG00000018283	rnf17	90	70.447	ENSSDUG00000013530	rnf17	100	70.309	Seriola_dumerili
ENSAOCG00000018283	rnf17	91	71.905	ENSSLDG00000019577	rnf17	99	71.905	Seriola_lalandi_dorsalis
ENSAOCG00000018283	rnf17	80	35.077	ENSSARG00000003016	RNF17	63	35.077	Sorex_araneus
ENSAOCG00000018283	rnf17	74	36.766	ENSSPUG00000008917	RNF17	82	35.568	Sphenodon_punctatus
ENSAOCG00000018283	rnf17	89	79.451	ENSSPAG00000001925	rnf17	99	79.451	Stegastes_partitus
ENSAOCG00000018283	rnf17	98	32.547	ENSSSCG00000009572	RNF17	97	32.385	Sus_scrofa
ENSAOCG00000018283	rnf17	69	34.703	ENSTGUG00000011267	-	100	34.703	Taeniopygia_guttata
ENSAOCG00000018283	rnf17	99	51.873	ENSTRUG00000015498	rnf17	99	51.873	Takifugu_rubripes
ENSAOCG00000018283	rnf17	74	56.229	ENSTNIG00000015681	rnf17	99	56.229	Tetraodon_nigroviridis
ENSAOCG00000018283	rnf17	80	40.000	ENSTBEG00000000282	RNF17	78	34.085	Tupaia_belangeri
ENSAOCG00000018283	rnf17	98	30.206	ENSTTRG00000012698	RNF17	98	30.249	Tursiops_truncatus
ENSAOCG00000018283	rnf17	57	40.191	ENSUMAG00000013953	-	98	34.970	Ursus_maritimus
ENSAOCG00000018283	rnf17	82	45.070	ENSVPAG00000011388	RNF17	76	45.070	Vicugna_pacos
ENSAOCG00000018283	rnf17	98	32.459	ENSVVUG00000006226	RNF17	97	32.272	Vulpes_vulpes
ENSAOCG00000018283	rnf17	71	31.810	ENSXETG00000034020	RNF17	99	40.099	Xenopus_tropicalis
ENSAOCG00000018283	rnf17	90	61.449	ENSXCOG00000018295	rnf17	99	62.253	Xiphophorus_couchianus
ENSAOCG00000018283	rnf17	90	62.999	ENSXMAG00000014747	rnf17	99	63.255	Xiphophorus_maculatus