EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAOCG00000018579 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Minus strand
Length: 8313 bases
Position: chrNXFZ01003140.1:5429-13741
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000028744	zf-C2H2	PF00096.26	8e-16	1	3
ENSAOCP00000028744	zf-C2H2	PF00096.26	8e-16	2	3
ENSAOCP00000028744	zf-C2H2	PF00096.26	8e-16	3	3
ENSAOCP00000028744	zf-met	PF12874.7	3.6e-09	1	2
ENSAOCP00000028744	zf-met	PF12874.7	3.6e-09	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000031259	-	510	-	ENSAOCP00000028744	169 (aa)	-	-

Gene Model

Click here to download ENSAOCG00000018579's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000018579's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAOCG00000018579	-	98	36.458	ENSAOCG00000022004	znf236	52	36.458
ENSAOCG00000018579	-	70	41.379	ENSAOCG00000000570	-	62	41.379
ENSAOCG00000018579	-	82	40.860	ENSAOCG00000003277	-	66	47.273
ENSAOCG00000018579	-	97	39.604	ENSAOCG00000003494	si:dkey-7i4.5	91	39.604
ENSAOCG00000018579	-	71	36.522	ENSAOCG00000007388	-	58	39.241
ENSAOCG00000018579	-	96	38.298	ENSAOCG00000013978	-	86	38.298
ENSAOCG00000018579	-	86	37.984	ENSAOCG00000013656	-	60	37.984
ENSAOCG00000018579	-	92	40.449	ENSAOCG00000022375	-	87	40.449
ENSAOCG00000018579	-	95	40.860	ENSAOCG00000022675	-	93	40.860
ENSAOCG00000018579	-	79	40.206	ENSAOCG00000017595	-	61	40.206
ENSAOCG00000018579	-	75	42.478	ENSAOCG00000016088	-	68	42.478
ENSAOCG00000018579	-	90	39.806	ENSAOCG00000020830	-	96	42.553
ENSAOCG00000018579	-	64	40.404	ENSAOCG00000016409	-	62	40.404
ENSAOCG00000018579	-	69	39.189	ENSAOCG00000017968	snai2	50	39.189
ENSAOCG00000018579	-	83	44.231	ENSAOCG00000013578	-	69	44.231
ENSAOCG00000018579	-	86	40.404	ENSAOCG00000013130	-	79	40.404
ENSAOCG00000018579	-	78	37.288	ENSAOCG00000011204	-	50	37.288
ENSAOCG00000018579	-	72	40.000	ENSAOCG00000023304	-	52	40.000
ENSAOCG00000018579	-	70	42.708	ENSAOCG00000012653	-	81	42.708
ENSAOCG00000018579	-	75	39.423	ENSAOCG00000012903	-	67	39.423
ENSAOCG00000018579	-	98	37.662	ENSAOCG00000010471	-	55	37.662
ENSAOCG00000018579	-	81	36.275	ENSAOCG00000010498	-	53	36.275
ENSAOCG00000018579	-	71	39.286	ENSAOCG00000017602	-	65	39.286
ENSAOCG00000018579	-	87	41.414	ENSAOCG00000022459	-	93	42.574
ENSAOCG00000018579	-	74	38.710	ENSAOCG00000013589	-	90	38.710
ENSAOCG00000018579	-	85	45.714	ENSAOCG00000014818	znf319b	75	45.070
ENSAOCG00000018579	-	67	37.805	ENSAOCG00000007347	-	61	37.805
ENSAOCG00000018579	-	72	40.741	ENSAOCG00000013672	-	93	39.130
ENSAOCG00000018579	-	65	39.806	ENSAOCG00000001327	-	83	39.806
ENSAOCG00000018579	-	89	39.506	ENSAOCG00000014165	-	95	35.238
ENSAOCG00000018579	-	70	38.318	ENSAOCG00000021187	gfi1b	53	38.318
ENSAOCG00000018579	-	76	43.333	ENSAOCG00000016905	-	63	37.681
ENSAOCG00000018579	-	79	39.000	ENSAOCG00000000448	-	94	39.000
ENSAOCG00000018579	-	96	41.071	ENSAOCG00000015369	-	99	41.071
ENSAOCG00000018579	-	76	40.000	ENSAOCG00000001615	-	80	40.000
ENSAOCG00000018579	-	82	39.796	ENSAOCG00000022079	-	77	39.796
ENSAOCG00000018579	-	62	33.036	ENSAOCG00000005965	-	59	33.036
ENSAOCG00000018579	-	55	40.909	ENSAOCG00000024256	-	85	40.909
ENSAOCG00000018579	-	76	40.000	ENSAOCG00000022283	-	87	40.000
ENSAOCG00000018579	-	96	41.975	ENSAOCG00000013710	-	75	41.975
ENSAOCG00000018579	-	82	44.792	ENSAOCG00000024281	-	87	44.792
ENSAOCG00000018579	-	83	42.857	ENSAOCG00000007134	-	71	41.176
ENSAOCG00000018579	-	67	40.000	ENSAOCG00000016897	-	59	40.000
ENSAOCG00000018579	-	95	36.275	ENSAOCG00000013934	-	55	36.275
ENSAOCG00000018579	-	86	42.424	ENSAOCG00000018484	-	89	45.263
ENSAOCG00000018579	-	85	41.304	ENSAOCG00000005450	ZNF319	83	41.304
ENSAOCG00000018579	-	75	41.346	ENSAOCG00000001341	-	88	41.346
ENSAOCG00000018579	-	76	45.263	ENSAOCG00000004564	-	79	45.263
ENSAOCG00000018579	-	72	38.667	ENSAOCG00000003910	scrt1b	55	38.667
ENSAOCG00000018579	-	83	42.105	ENSAOCG00000007045	-	82	42.105
ENSAOCG00000018579	-	86	43.617	ENSAOCG00000018543	-	84	43.617
ENSAOCG00000018579	-	84	37.975	ENSAOCG00000014806	prdm5	67	37.975
ENSAOCG00000018579	-	85	34.314	ENSAOCG00000002430	-	66	34.314
ENSAOCG00000018579	-	90	40.000	ENSAOCG00000016287	-	65	40.000
ENSAOCG00000018579	-	59	35.780	ENSAOCG00000006744	-	69	35.780
ENSAOCG00000018579	-	86	40.385	ENSAOCG00000013124	-	69	40.385
ENSAOCG00000018579	-	79	38.144	ENSAOCG00000020624	-	71	38.144
ENSAOCG00000018579	-	80	37.234	ENSAOCG00000012813	-	60	37.234
ENSAOCG00000018579	-	79	39.362	ENSAOCG00000019475	-	67	39.362
ENSAOCG00000018579	-	57	40.816	ENSAOCG00000001325	-	65	40.816
ENSAOCG00000018579	-	65	40.594	ENSAOCG00000004559	-	87	40.594
ENSAOCG00000018579	-	70	40.000	ENSAOCG00000006793	-	79	40.000
ENSAOCG00000018579	-	86	37.069	ENSAOCG00000018307	-	87	40.506
ENSAOCG00000018579	-	75	41.414	ENSAOCG00000022276	-	91	41.414
ENSAOCG00000018579	-	95	37.374	ENSAOCG00000002585	-	65	37.374
ENSAOCG00000018579	-	87	38.947	ENSAOCG00000002795	-	65	38.947
ENSAOCG00000018579	-	76	38.596	ENSAOCG00000016737	-	98	38.596
ENSAOCG00000018579	-	84	39.130	ENSAOCG00000009970	-	60	39.130
ENSAOCG00000018579	-	76	42.424	ENSAOCG00000015586	-	88	42.424
ENSAOCG00000018579	-	77	38.667	ENSAOCG00000021557	scrt2	55	38.667

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000018579	-	74	39.450	ENSACIG00000017166	-	51	39.450	Amphilophus_citrinellus
ENSAOCG00000018579	-	75	57.609	ENSAPEG00000019755	-	89	57.609	Amphiprion_percula
ENSAOCG00000018579	-	70	43.750	ENSAPEG00000007889	-	68	43.836	Amphiprion_percula
ENSAOCG00000018579	-	70	38.372	WBGene00021374	Y37E11B.1	83	38.372	Caenorhabditis_elegans
ENSAOCG00000018579	-	79	38.525	ENSCING00000005713	-	67	38.525	Ciona_intestinalis
ENSAOCG00000018579	-	69	33.945	ENSCING00000004861	zf(c2h2)-12	66	33.945	Ciona_intestinalis
ENSAOCG00000018579	-	77	36.000	ENSCSAVG00000006729	-	67	36.000	Ciona_savignyi
ENSAOCG00000018579	-	81	34.000	ENSCSAVG00000005896	-	70	34.000	Ciona_savignyi
ENSAOCG00000018579	-	82	41.935	ENSCSAVG00000009574	-	99	47.297	Ciona_savignyi
ENSAOCG00000018579	-	58	39.024	ENSCSAVG00000003895	-	100	39.024	Ciona_savignyi
ENSAOCG00000018579	-	73	40.777	ENSCSEG00000005491	-	52	40.777	Cynoglossus_semilaevis
ENSAOCG00000018579	-	72	42.105	ENSCVAG00000002295	-	72	42.105	Cyprinodon_variegatus
ENSAOCG00000018579	-	69	39.655	ENSCVAG00000019574	-	70	39.655	Cyprinodon_variegatus
ENSAOCG00000018579	-	75	35.433	FBgn0037722	CG8319	56	35.433	Drosophila_melanogaster
ENSAOCG00000018579	-	67	38.261	FBgn0028895	CG17328	54	38.261	Drosophila_melanogaster
ENSAOCG00000018579	-	77	34.343	FBgn0033934	CG17385	55	34.343	Drosophila_melanogaster
ENSAOCG00000018579	-	80	37.895	ENSEBUG00000008392	-	75	39.362	Eptatretus_burgeri
ENSAOCG00000018579	-	74	45.263	ENSEBUG00000015522	-	69	45.263	Eptatretus_burgeri
ENSAOCG00000018579	-	72	41.441	ENSEBUG00000004841	-	79	41.441	Eptatretus_burgeri
ENSAOCG00000018579	-	96	43.478	ENSEBUG00000000735	-	98	43.478	Eptatretus_burgeri
ENSAOCG00000018579	-	74	42.466	ENSELUG00000014586	-	82	42.466	Esox_lucius
ENSAOCG00000018579	-	80	40.659	ENSFHEG00000020889	-	62	40.659	Fundulus_heteroclitus
ENSAOCG00000018579	-	82	38.961	ENSFHEG00000012990	-	90	38.961	Fundulus_heteroclitus
ENSAOCG00000018579	-	89	44.681	ENSFHEG00000013644	-	78	44.681	Fundulus_heteroclitus
ENSAOCG00000018579	-	79	38.462	ENSGACG00000018415	-	98	38.462	Gasterosteus_aculeatus
ENSAOCG00000018579	-	90	42.478	ENSHCOG00000014881	-	56	42.478	Hippocampus_comes
ENSAOCG00000018579	-	80	34.247	ENSHCOG00000017437	-	56	36.697	Hippocampus_comes
ENSAOCG00000018579	-	80	35.484	ENSHCOG00000008181	-	55	35.484	Hippocampus_comes
ENSAOCG00000018579	-	71	37.288	ENSKMAG00000007658	-	87	37.288	Kryptolebias_marmoratus
ENSAOCG00000018579	-	77	42.391	ENSKMAG00000012909	-	67	42.391	Kryptolebias_marmoratus
ENSAOCG00000018579	-	71	35.294	ENSLBEG00000026573	-	52	35.294	Labrus_bergylta
ENSAOCG00000018579	-	78	32.323	ENSONIG00000003471	-	98	34.118	Oreochromis_niloticus
ENSAOCG00000018579	-	64	43.836	ENSONIG00000009894	-	66	43.836	Oreochromis_niloticus
ENSAOCG00000018579	-	83	33.077	ENSONIG00000003224	-	80	35.185	Oreochromis_niloticus
ENSAOCG00000018579	-	80	40.870	ENSONIG00000016416	-	98	40.870	Oreochromis_niloticus
ENSAOCG00000018579	-	96	40.426	ENSONIG00000007812	-	99	40.426	Oreochromis_niloticus
ENSAOCG00000018579	-	70	40.179	ENSORLG00015018254	-	87	40.179	Oryzias_latipes_hsok
ENSAOCG00000018579	-	82	31.707	ENSOMEG00000017673	-	58	31.707	Oryzias_melastigma
ENSAOCG00000018579	-	59	38.462	ENSPMGG00000019842	-	63	38.462	Periophthalmus_magnuspinnatus
ENSAOCG00000018579	-	79	36.522	ENSPMGG00000000458	-	88	37.113	Periophthalmus_magnuspinnatus
ENSAOCG00000018579	-	72	37.079	ENSPMGG00000012289	-	67	37.079	Periophthalmus_magnuspinnatus
ENSAOCG00000018579	-	85	38.710	ENSPMGG00000022524	-	96	38.710	Periophthalmus_magnuspinnatus
ENSAOCG00000018579	-	96	38.298	ENSPMGG00000010664	-	90	38.298	Periophthalmus_magnuspinnatus
ENSAOCG00000018579	-	89	35.849	ENSPMGG00000000243	-	73	35.616	Periophthalmus_magnuspinnatus
ENSAOCG00000018579	-	69	36.709	ENSPMGG00000000489	-	72	36.709	Periophthalmus_magnuspinnatus
ENSAOCG00000018579	-	72	38.667	ENSPMGG00000000218	-	60	38.667	Periophthalmus_magnuspinnatus
ENSAOCG00000018579	-	80	36.735	ENSPMAG00000007983	-	81	36.735	Petromyzon_marinus
ENSAOCG00000018579	-	59	35.714	ENSPFOG00000020691	-	80	36.842	Poecilia_formosa
ENSAOCG00000018579	-	96	42.202	ENSPFOG00000002879	-	99	42.202	Poecilia_formosa
ENSAOCG00000018579	-	82	39.815	ENSPLAG00000006174	-	71	39.815	Poecilia_latipinna
ENSAOCG00000018579	-	67	47.561	ENSPLAG00000011254	-	56	47.561	Poecilia_latipinna
ENSAOCG00000018579	-	96	39.806	ENSPMEG00000022676	-	99	39.806	Poecilia_mexicana
ENSAOCG00000018579	-	69	47.561	ENSPMEG00000007503	-	58	47.561	Poecilia_mexicana
ENSAOCG00000018579	-	66	47.561	ENSPREG00000015352	-	55	47.561	Poecilia_reticulata
ENSAOCG00000018579	-	70	38.298	ENSPREG00000016204	-	62	38.298	Poecilia_reticulata
ENSAOCG00000018579	-	93	42.157	ENSSDUG00000000946	-	96	42.157	Seriola_dumerili
ENSAOCG00000018579	-	67	47.561	ENSXMAG00000022242	-	71	47.561	Xiphophorus_maculatus