EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAOCG00000018884 (Gene tree)
Gene ID: 111569170
Gene Symbol: srpra
Alias: id:ibd1064|srpr|wu:fd12f02
Full Name: SRP receptor subunit alpha
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Plus strand
Length: 8740 bases
Position: chrNXFZ01002302.1:853050-861789
Accession: 111569170
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000014195	SRP54	PF00448.22	3.7e-48	1	1
ENSAOCP00000028910	SRP54	PF00448.22	4.7e-48	1	1
ENSAOCP00000014195	SRP54_N	PF02881.19	4.3e-10	1	1
ENSAOCP00000028910	SRP54_N	PF02881.19	4.8e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000031345	-	1773	-	ENSAOCP00000014195	590 (aa)	-	-
ENSAOCT00000022495	-	4814	XM_023271157	ENSAOCP00000028910	650 (aa)	XP_023126925	UPI000C30A496

Gene Model

Click here to download ENSAOCG00000018884's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000018884's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000018884	srpra	100	69.008	ENSG00000182934	SRPRA	100	68.389	Homo_sapiens
ENSAOCG00000018884	srpra	100	99.077	ENSAPOG00000017588	srpra	100	99.077	Acanthochromis_polyacanthus
ENSAOCG00000018884	srpra	100	69.207	ENSAMEG00000000117	SRPRA	100	67.481	Ailuropoda_melanoleuca
ENSAOCG00000018884	srpra	100	87.692	ENSACIG00000021588	srpra	100	88.923	Amphilophus_citrinellus
ENSAOCG00000018884	srpra	100	99.846	ENSAPEG00000022286	srpra	100	99.661	Amphiprion_percula
ENSAOCG00000018884	srpra	100	90.951	ENSATEG00000023578	srpra	95	96.657	Anabas_testudineus
ENSAOCG00000018884	srpra	94	70.579	ENSAPLG00000016079	SRPRA	99	70.531	Anas_platyrhynchos
ENSAOCG00000018884	srpra	100	69.925	ENSACAG00000000108	SRPRA	100	70.376	Anolis_carolinensis
ENSAOCG00000018884	srpra	100	68.550	ENSANAG00000020346	SRPRA	100	68.140	Aotus_nancymaae
ENSAOCG00000018884	srpra	100	90.308	ENSACLG00000000518	srpra	100	90.154	Astatotilapia_calliptera
ENSAOCG00000018884	srpra	100	75.410	ENSAMXG00000009975	srpra	100	74.426	Astyanax_mexicanus
ENSAOCG00000018884	srpra	100	68.445	ENSBTAG00000014105	SRPRA	100	68.445	Bos_taurus
ENSAOCG00000018884	srpra	99	48.499	WBGene00009521	F38A1.8	99	48.025	Caenorhabditis_elegans
ENSAOCG00000018884	srpra	100	68.300	ENSCJAG00000008752	SRPRA	100	67.890	Callithrix_jacchus
ENSAOCG00000018884	srpra	100	67.176	ENSCAFG00000010474	SRPRA	100	66.616	Canis_familiaris
ENSAOCG00000018884	srpra	100	68.855	ENSCAFG00020010608	SRPRA	100	68.293	Canis_lupus_dingo
ENSAOCG00000018884	srpra	100	68.902	ENSCHIG00000012423	SRPRA	100	67.988	Capra_hircus
ENSAOCG00000018884	srpra	88	79.339	ENSTSYG00000005187	SRPRA	90	86.984	Carlito_syrichta
ENSAOCG00000018884	srpra	94	68.197	ENSCAPG00000007098	SRPRA	91	88.722	Cavia_aperea
ENSAOCG00000018884	srpra	100	68.855	ENSCPOG00000014976	SRPRA	91	88.722	Cavia_porcellus
ENSAOCG00000018884	srpra	100	68.702	ENSCCAG00000025602	SRPRA	100	67.683	Cebus_capucinus
ENSAOCG00000018884	srpra	100	68.902	ENSCATG00000039354	SRPRA	100	68.598	Cercocebus_atys
ENSAOCG00000018884	srpra	100	68.855	ENSCLAG00000016839	SRPRA	100	68.445	Chinchilla_lanigera
ENSAOCG00000018884	srpra	100	68.855	ENSCSAG00000002271	SRPRA	100	68.445	Chlorocebus_sabaeus
ENSAOCG00000018884	srpra	55	86.735	ENSCHOG00000010015	-	73	86.735	Choloepus_hoffmanni
ENSAOCG00000018884	srpra	100	70.382	ENSCPBG00000011128	SRPRA	100	70.732	Chrysemys_picta_bellii
ENSAOCG00000018884	srpra	99	58.171	ENSCING00000008954	-	100	58.108	Ciona_intestinalis
ENSAOCG00000018884	srpra	99	59.848	ENSCSAVG00000005602	-	100	59.551	Ciona_savignyi
ENSAOCG00000018884	srpra	100	68.750	ENSCANG00000032337	SRPRA	100	68.445	Colobus_angolensis_palliatus
ENSAOCG00000018884	srpra	100	68.855	ENSCGRG00001017670	Srpr	100	68.598	Cricetulus_griseus_chok1gshd
ENSAOCG00000018884	srpra	100	68.855	ENSCGRG00000009892	Srpr	90	88.889	Cricetulus_griseus_crigri
ENSAOCG00000018884	srpra	100	87.749	ENSCSEG00000002374	srpra	100	87.289	Cynoglossus_semilaevis
ENSAOCG00000018884	srpra	100	87.289	ENSCVAG00000019881	srpra	100	87.443	Cyprinodon_variegatus
ENSAOCG00000018884	srpra	100	79.389	ENSDARG00000061124	srpra	100	79.389	Danio_rerio
ENSAOCG00000018884	srpra	100	68.580	ENSDNOG00000010821	SRPRA	100	67.267	Dasypus_novemcinctus
ENSAOCG00000018884	srpra	100	69.160	ENSDORG00000016719	Srpr	100	68.750	Dipodomys_ordii
ENSAOCG00000018884	srpra	99	52.519	FBgn0010391	Gtp-bp	100	52.896	Drosophila_melanogaster
ENSAOCG00000018884	srpra	100	67.776	ENSETEG00000013956	SRPRA	100	67.020	Echinops_telfairi
ENSAOCG00000018884	srpra	63	73.037	ENSEBUG00000002602	srpra	93	70.976	Eptatretus_burgeri
ENSAOCG00000018884	srpra	100	68.960	ENSEASG00005022980	SRPRA	100	67.982	Equus_asinus_asinus
ENSAOCG00000018884	srpra	100	68.960	ENSECAG00000014692	SRPRA	100	67.982	Equus_caballus
ENSAOCG00000018884	srpra	100	63.982	ENSEEUG00000007920	SRPRA	100	63.222	Erinaceus_europaeus
ENSAOCG00000018884	srpra	100	86.086	ENSELUG00000017643	srpra	100	86.503	Esox_lucius
ENSAOCG00000018884	srpra	80	63.670	ENSFCAG00000030894	-	99	62.430	Felis_catus
ENSAOCG00000018884	srpra	100	69.184	ENSFCAG00000011274	-	100	68.533	Felis_catus
ENSAOCG00000018884	srpra	99	68.000	ENSFALG00000005048	SRPRA	99	67.123	Ficedula_albicollis
ENSAOCG00000018884	srpra	100	68.550	ENSFDAG00000016229	SRPRA	92	83.916	Fukomys_damarensis
ENSAOCG00000018884	srpra	100	89.247	ENSFHEG00000016959	srpra	100	89.555	Fundulus_heteroclitus
ENSAOCG00000018884	srpra	100	83.436	ENSGMOG00000013244	srpra	100	83.231	Gadus_morhua
ENSAOCG00000018884	srpra	100	70.489	ENSGALG00000030759	SRPRA	100	70.031	Gallus_gallus
ENSAOCG00000018884	srpra	100	89.692	ENSGAFG00000000453	srpra	100	90.154	Gambusia_affinis
ENSAOCG00000018884	srpra	100	86.217	ENSGACG00000006550	srpra	100	85.692	Gasterosteus_aculeatus
ENSAOCG00000018884	srpra	100	70.106	ENSGAGG00000021157	SRPRA	100	70.884	Gopherus_agassizii
ENSAOCG00000018884	srpra	100	69.008	ENSGGOG00000012962	SRPRA	100	68.389	Gorilla_gorilla
ENSAOCG00000018884	srpra	100	90.154	ENSHBUG00000000119	srpra	100	90.000	Haplochromis_burtoni
ENSAOCG00000018884	srpra	100	68.293	ENSHGLG00000001597	SRPR	94	89.394	Heterocephalus_glaber_female
ENSAOCG00000018884	srpra	100	68.293	ENSHGLG00100006449	SRPR	94	89.394	Heterocephalus_glaber_male
ENSAOCG00000018884	srpra	100	87.289	ENSHCOG00000010749	srpra	100	87.596	Hippocampus_comes
ENSAOCG00000018884	srpra	94	75.812	ENSIPUG00000000867	srpra	99	74.919	Ictalurus_punctatus
ENSAOCG00000018884	srpra	100	68.702	ENSSTOG00000009897	SRPRA	100	68.293	Ictidomys_tridecemlineatus
ENSAOCG00000018884	srpra	100	68.654	ENSJJAG00000020272	Srpr	100	67.786	Jaculus_jaculus
ENSAOCG00000018884	srpra	100	88.497	ENSKMAG00000002280	srpra	100	89.110	Kryptolebias_marmoratus
ENSAOCG00000018884	srpra	100	91.859	ENSLBEG00000009608	srpra	100	92.012	Labrus_bergylta
ENSAOCG00000018884	srpra	100	70.651	ENSLACG00000017781	SRPRA	100	71.601	Latimeria_chalumnae
ENSAOCG00000018884	srpra	100	77.812	ENSLOCG00000002733	srpra	100	76.748	Lepisosteus_oculatus
ENSAOCG00000018884	srpra	100	68.541	ENSLAFG00000010252	SRPRA	100	68.389	Loxodonta_africana
ENSAOCG00000018884	srpra	100	69.008	ENSMFAG00000032606	SRPRA	100	68.598	Macaca_fascicularis
ENSAOCG00000018884	srpra	100	69.008	ENSMMUG00000007938	SRPRA	100	68.598	Macaca_mulatta
ENSAOCG00000018884	srpra	100	68.798	ENSMNEG00000030709	SRPRA	100	68.389	Macaca_nemestrina
ENSAOCG00000018884	srpra	100	68.902	ENSMLEG00000043404	SRPRA	100	68.598	Mandrillus_leucophaeus
ENSAOCG00000018884	srpra	100	89.231	ENSMAMG00000000473	srpra	100	89.846	Mastacembelus_armatus
ENSAOCG00000018884	srpra	100	90.308	ENSMZEG00005013432	srpra	100	90.154	Maylandia_zebra
ENSAOCG00000018884	srpra	94	70.244	ENSMGAG00000000732	SRPRA	100	69.628	Meleagris_gallopavo
ENSAOCG00000018884	srpra	100	69.008	ENSMAUG00000015648	Srpr	100	68.598	Mesocricetus_auratus
ENSAOCG00000018884	srpra	100	68.397	ENSMICG00000015981	SRPRA	100	67.933	Microcebus_murinus
ENSAOCG00000018884	srpra	100	68.550	ENSMOCG00000008311	Srpr	100	67.988	Microtus_ochrogaster
ENSAOCG00000018884	srpra	100	87.076	ENSMMOG00000005019	srpra	100	85.460	Mola_mola
ENSAOCG00000018884	srpra	100	68.702	ENSMODG00000004576	-	100	67.481	Monodelphis_domestica
ENSAOCG00000018884	srpra	100	92.000	ENSMALG00000011343	srpra	100	92.000	Monopterus_albus
ENSAOCG00000018884	srpra	100	68.654	MGP_CAROLIEiJ_G0031951	Srpr	86	90.152	Mus_caroli
ENSAOCG00000018884	srpra	100	68.550	ENSMUSG00000032042	Srpr	86	89.394	Mus_musculus
ENSAOCG00000018884	srpra	100	68.550	MGP_PahariEiJ_G0014816	Srpr	86	89.394	Mus_pahari
ENSAOCG00000018884	srpra	100	65.306	MGP_SPRETEiJ_G0033075	Srpr	90	82.759	Mus_spretus
ENSAOCG00000018884	srpra	100	69.160	ENSMPUG00000006626	SRPRA	100	67.530	Mustela_putorius_furo
ENSAOCG00000018884	srpra	100	67.737	ENSMLUG00000017334	SRPRA	100	68.289	Myotis_lucifugus
ENSAOCG00000018884	srpra	100	68.397	ENSNGAG00000015686	Srpr	100	67.884	Nannospalax_galili
ENSAOCG00000018884	srpra	100	89.692	ENSNBRG00000017311	srpra	100	89.538	Neolamprologus_brichardi
ENSAOCG00000018884	srpra	99	65.438	ENSNLEG00000007467	SRPRA	100	67.624	Nomascus_leucogenys
ENSAOCG00000018884	srpra	94	67.638	ENSMEUG00000004956	SRPRA	100	66.504	Notamacropus_eugenii
ENSAOCG00000018884	srpra	92	74.755	ENSOPRG00000013160	SRPRA	100	65.038	Ochotona_princeps
ENSAOCG00000018884	srpra	100	67.873	ENSODEG00000004730	SRPRA	100	68.598	Octodon_degus
ENSAOCG00000018884	srpra	100	90.154	ENSONIG00000005324	srpra	100	90.000	Oreochromis_niloticus
ENSAOCG00000018884	srpra	100	69.160	ENSOCUG00000017057	SRPRA	100	68.598	Oryctolagus_cuniculus
ENSAOCG00000018884	srpra	100	86.923	ENSORLG00000014676	srpra	100	85.692	Oryzias_latipes
ENSAOCG00000018884	srpra	100	87.077	ENSORLG00020009240	srpra	100	86.308	Oryzias_latipes_hni
ENSAOCG00000018884	srpra	100	86.923	ENSORLG00015015405	srpra	100	86.154	Oryzias_latipes_hsok
ENSAOCG00000018884	srpra	100	87.538	ENSOMEG00000005872	srpra	100	86.769	Oryzias_melastigma
ENSAOCG00000018884	srpra	100	68.550	ENSOGAG00000008926	SRPRA	100	67.781	Otolemur_garnettii
ENSAOCG00000018884	srpra	100	65.854	ENSOARG00000012397	SRPRA	100	65.297	Ovis_aries
ENSAOCG00000018884	srpra	100	69.008	ENSPPAG00000030813	SRPRA	100	68.389	Pan_paniscus
ENSAOCG00000018884	srpra	100	69.184	ENSPPRG00000001542	SRPRA	100	68.533	Panthera_pardus
ENSAOCG00000018884	srpra	100	69.033	ENSPTIG00000006989	SRPRA	100	68.381	Panthera_tigris_altaica
ENSAOCG00000018884	srpra	100	69.008	ENSPTRG00000028360	SRPRA	100	68.389	Pan_troglodytes
ENSAOCG00000018884	srpra	100	69.008	ENSPANG00000010858	SRPRA	100	68.598	Papio_anubis
ENSAOCG00000018884	srpra	100	77.523	ENSPKIG00000016106	srpra	100	76.758	Paramormyrops_kingsleyae
ENSAOCG00000018884	srpra	94	71.126	ENSPSIG00000012009	SRPRA	100	71.173	Pelodiscus_sinensis
ENSAOCG00000018884	srpra	100	83.589	ENSPMGG00000001393	srpra	100	84.816	Periophthalmus_magnuspinnatus
ENSAOCG00000018884	srpra	100	68.702	ENSPEMG00000018279	Srpr	100	68.293	Peromyscus_maniculatus_bairdii
ENSAOCG00000018884	srpra	99	62.270	ENSPMAG00000009559	srpra	99	63.247	Petromyzon_marinus
ENSAOCG00000018884	srpra	100	67.988	ENSPCIG00000010207	SRPRA	100	67.835	Phascolarctos_cinereus
ENSAOCG00000018884	srpra	100	90.308	ENSPFOG00000003114	srpra	100	90.308	Poecilia_formosa
ENSAOCG00000018884	srpra	100	90.462	ENSPLAG00000007323	srpra	100	90.462	Poecilia_latipinna
ENSAOCG00000018884	srpra	100	90.154	ENSPMEG00000015658	srpra	100	90.154	Poecilia_mexicana
ENSAOCG00000018884	srpra	100	90.308	ENSPREG00000004937	srpra	100	90.308	Poecilia_reticulata
ENSAOCG00000018884	srpra	89	86.842	ENSPPYG00000004045	SRPRA	100	86.842	Pongo_abelii
ENSAOCG00000018884	srpra	63	90.698	ENSPCAG00000003801	-	62	90.698	Procavia_capensis
ENSAOCG00000018884	srpra	100	68.702	ENSPCOG00000025726	SRPRA	100	68.293	Propithecus_coquereli
ENSAOCG00000018884	srpra	100	68.333	ENSPVAG00000000993	SRPRA	100	68.237	Pteropus_vampyrus
ENSAOCG00000018884	srpra	100	90.308	ENSPNYG00000012371	srpra	100	90.154	Pundamilia_nyererei
ENSAOCG00000018884	srpra	100	80.031	ENSPNAG00000013476	srpra	100	79.448	Pygocentrus_nattereri
ENSAOCG00000018884	srpra	100	68.702	ENSRNOG00000010543	Srpra	100	68.293	Rattus_norvegicus
ENSAOCG00000018884	srpra	100	68.855	ENSRBIG00000008702	SRPRA	100	68.598	Rhinopithecus_bieti
ENSAOCG00000018884	srpra	100	69.008	ENSRROG00000029494	SRPRA	100	68.598	Rhinopithecus_roxellana
ENSAOCG00000018884	srpra	55	41.860	YDR292C	-	52	42.249	Saccharomyces_cerevisiae
ENSAOCG00000018884	srpra	100	68.397	ENSSBOG00000035892	SRPRA	100	67.988	Saimiri_boliviensis_boliviensis
ENSAOCG00000018884	srpra	94	67.857	ENSSHAG00000009168	SRPRA	100	67.099	Sarcophilus_harrisii
ENSAOCG00000018884	srpra	100	80.944	ENSSFOG00015008837	srpra	100	80.776	Scleropages_formosus
ENSAOCG00000018884	srpra	100	85.667	ENSSMAG00000002783	srpra	100	85.155	Scophthalmus_maximus
ENSAOCG00000018884	srpra	100	91.564	ENSSDUG00000013920	srpra	100	87.960	Seriola_dumerili
ENSAOCG00000018884	srpra	100	91.411	ENSSLDG00000008601	srpra	93	91.411	Seriola_lalandi_dorsalis
ENSAOCG00000018884	srpra	82	82.927	ENSSARG00000012434	SRPRA	86	82.927	Sorex_araneus
ENSAOCG00000018884	srpra	100	68.589	ENSSPUG00000018221	SRPRA	100	68.598	Sphenodon_punctatus
ENSAOCG00000018884	srpra	100	96.012	ENSSPAG00000005103	srpra	100	96.012	Stegastes_partitus
ENSAOCG00000018884	srpra	100	68.855	ENSSSCG00000015227	SRPRA	100	68.237	Sus_scrofa
ENSAOCG00000018884	srpra	94	68.071	ENSTGUG00000000815	SRPRA	100	67.311	Taeniopygia_guttata
ENSAOCG00000018884	srpra	100	87.538	ENSTRUG00000006856	srpra	100	86.923	Takifugu_rubripes
ENSAOCG00000018884	srpra	100	82.202	ENSTNIG00000010316	srpra	100	82.202	Tetraodon_nigroviridis
ENSAOCG00000018884	srpra	100	69.102	ENSTTRG00000001558	SRPRA	100	67.123	Tursiops_truncatus
ENSAOCG00000018884	srpra	100	69.008	ENSUAMG00000005510	SRPRA	100	68.092	Ursus_americanus
ENSAOCG00000018884	srpra	96	62.835	ENSUMAG00000002269	SRPRA	100	62.305	Ursus_maritimus
ENSAOCG00000018884	srpra	69	90.698	ENSVPAG00000001077	SRPRA	75	90.698	Vicugna_pacos
ENSAOCG00000018884	srpra	100	68.855	ENSVVUG00000020094	SRPRA	100	68.140	Vulpes_vulpes
ENSAOCG00000018884	srpra	100	61.424	ENSXETG00000003920	srpra	100	61.446	Xenopus_tropicalis
ENSAOCG00000018884	srpra	100	79.153	ENSXCOG00000001286	srpra	98	97.460	Xiphophorus_couchianus
ENSAOCG00000018884	srpra	100	89.692	ENSXMAG00000028401	srpra	100	89.692	Xiphophorus_maculatus