EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSAOCG00000019167 (Gene tree)
Gene ID
111566386
Gene Symbol
smarca4a
Alias
brahma-related gene 1|brg1|smarca2|smarca4|wu:fb51a08|yng|young
Full Name
SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 4
Gene Type
protein_coding
Species
Amphiprion_ocellaris
Status
putative
Strand
Plus strand
Length
14508 bases
Position
chrNXFZ01001996.1:70961-85468
Accession
111566386
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSAOCP00000014418ResIIIPF04851.152.6e-0911
ENSAOCP00000014418BRKPF07533.165.9e-1711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSAOCT00000022756-4155XM_023266943ENSAOCP000000144181384 (aa)XP_023122711-
Gene Model
Click here to download ENSAOCG00000019167's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000019167's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSAOCG00000019167smarca4a10073.184ENSAOCG00000009647-8673.786
ENSAOCG00000019167smarca4a10085.103ENSAOCG00000009450-7592.042
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSAOCG00000019167smarca4a10085.912ENSG00000127616SMARCA49995.652Homo_sapiens
ENSAOCG00000019167smarca4a9987.242ENSAPOG00000004542SMARCA49987.233Acanthochromis_polyacanthus
ENSAOCG00000019167smarca4a7793.431ENSAPOG00000003509smarca4a8693.431Acanthochromis_polyacanthus
ENSAOCG00000019167smarca4a10081.878ENSAMEG00000010868SMARCA49081.523Ailuropoda_melanoleuca
ENSAOCG00000019167smarca4a10086.913ENSACIG00000003035-9187.260Amphilophus_citrinellus
ENSAOCG00000019167smarca4a10093.526ENSACIG00000021550smarca4a8993.526Amphilophus_citrinellus
ENSAOCG00000019167smarca4a10099.856ENSAPEG00000015559smarca4a10099.856Amphiprion_percula
ENSAOCG00000019167smarca4a10085.378ENSAPEG00000023108-8886.000Amphiprion_percula
ENSAOCG00000019167smarca4a10087.194ENSATEG00000001094-9784.128Anabas_testudineus
ENSAOCG00000019167smarca4a10094.971ENSATEG00000011524smarca4a8994.971Anabas_testudineus
ENSAOCG00000019167smarca4a10085.724ENSANAG00000036991SMARCA48685.704Aotus_nancymaae
ENSAOCG00000019167smarca4a10092.847ENSACLG00000000163smarca4a9192.666Astatotilapia_calliptera
ENSAOCG00000019167smarca4a10086.700ENSACLG00000008638-9286.283Astatotilapia_calliptera
ENSAOCG00000019167smarca4a10088.722ENSAMXG00000021023smarca4a9088.009Astyanax_mexicanus
ENSAOCG00000019167smarca4a9987.482ENSAMXG00000011238-9686.815Astyanax_mexicanus
ENSAOCG00000019167smarca4a10086.736ENSBTAG00000019220SMARCA48786.081Bos_taurus
ENSAOCG00000019167smarca4a10081.494ENSCJAG00000005936SMARCA49081.602Callithrix_jacchus
ENSAOCG00000019167smarca4a10086.257ENSCAFG00000017584SMARCA48985.823Canis_familiaris
ENSAOCG00000019167smarca4a10087.178ENSCAFG00020024620SMARCA48986.399Canis_lupus_dingo
ENSAOCG00000019167smarca4a9982.512ENSCHIG00000015318SMARCA48781.825Capra_hircus
ENSAOCG00000019167smarca4a10086.667ENSTSYG00000012966SMARCA48986.101Carlito_syrichta
ENSAOCG00000019167smarca4a10084.055ENSCAPG00000015932SMARCA46888.900Cavia_aperea
ENSAOCG00000019167smarca4a10086.326ENSCPOG00000015549SMARCA48985.892Cavia_porcellus
ENSAOCG00000019167smarca4a10083.207ENSCCAG00000031660SMARCA48883.195Cebus_capucinus
ENSAOCG00000019167smarca4a10085.912ENSCATG00000029530SMARCA48985.892Cercocebus_atys
ENSAOCG00000019167smarca4a10087.099ENSCLAG00000011946SMARCA48986.532Chinchilla_lanigera
ENSAOCG00000019167smarca4a10085.981ENSCPBG00000009994SMARCA48985.685Chrysemys_picta_bellii
ENSAOCG00000019167smarca4a10085.912ENSCANG00000036013SMARCA48985.892Colobus_angolensis_palliatus
ENSAOCG00000019167smarca4a10086.050ENSCGRG00001016732Smarca48985.754Cricetulus_griseus_chok1gshd
ENSAOCG00000019167smarca4a10086.050ENSCGRG00000017242Smarca49185.754Cricetulus_griseus_crigri
ENSAOCG00000019167smarca4a9691.292ENSCSEG00000014771smarca4a9090.604Cynoglossus_semilaevis
ENSAOCG00000019167smarca4a10089.658ENSCVAG00000006979smarca4a9089.795Cyprinodon_variegatus
ENSAOCG00000019167smarca4a10085.546ENSCVAG00000003018-9185.873Cyprinodon_variegatus
ENSAOCG00000019167smarca4a10087.773ENSDARG00000077226smarca4a9087.423Danio_rerio
ENSAOCG00000019167smarca4a9682.286ENSDARG00000104339SMARCA48882.531Danio_rerio
ENSAOCG00000019167smarca4a10083.347ENSDNOG00000048847SMARCA48189.639Dasypus_novemcinctus
ENSAOCG00000019167smarca4a9580.865ENSDORG00000002544Smarca49279.465Dipodomys_ordii
ENSAOCG00000019167smarca4a10074.729ENSETEG00000013361SMARCA48974.084Echinops_telfairi
ENSAOCG00000019167smarca4a10087.179ENSEASG00005006167SMARCA48986.081Equus_asinus_asinus
ENSAOCG00000019167smarca4a10086.257ENSECAG00000008334SMARCA49085.823Equus_caballus
ENSAOCG00000019167smarca4a10079.544ENSELUG00000023232-8880.045Esox_lucius
ENSAOCG00000019167smarca4a10091.477ENSELUG00000010247smarca4a8791.241Esox_lucius
ENSAOCG00000019167smarca4a10086.010ENSFCAG00000004894SMARCA48985.576Felis_catus
ENSAOCG00000019167smarca4a9682.994ENSFALG00000004208SMARCA48683.273Ficedula_albicollis
ENSAOCG00000019167smarca4a10086.188ENSFDAG00000012237SMARCA49585.754Fukomys_damarensis
ENSAOCG00000019167smarca4a10091.589ENSFHEG00000010182smarca4a9692.026Fundulus_heteroclitus
ENSAOCG00000019167smarca4a10083.564ENSFHEG00000007902-8883.808Fundulus_heteroclitus
ENSAOCG00000019167smarca4a7893.220ENSGMOG00000002649smarca4a7985.159Gadus_morhua
ENSAOCG00000019167smarca4a9082.574ENSGMOG00000005756-7481.782Gadus_morhua
ENSAOCG00000019167smarca4a8285.148ENSGALG00000047145SMARCA410084.966Gallus_gallus
ENSAOCG00000019167smarca4a10083.866ENSGAFG00000008827-8884.244Gambusia_affinis
ENSAOCG00000019167smarca4a8991.660ENSGAFG00000014900smarca4a8791.812Gambusia_affinis
ENSAOCG00000019167smarca4a10080.214ENSGACG00000016033-9179.064Gasterosteus_aculeatus
ENSAOCG00000019167smarca4a9789.418ENSGACG00000006691smarca4a9089.625Gasterosteus_aculeatus
ENSAOCG00000019167smarca4a10086.228ENSGAGG00000016757SMARCA48986.001Gopherus_agassizii
ENSAOCG00000019167smarca4a10085.912ENSGGOG00000009882SMARCA48985.892Gorilla_gorilla
ENSAOCG00000019167smarca4a10093.051ENSHBUG00000021172smarca4a9092.867Haplochromis_burtoni
ENSAOCG00000019167smarca4a10087.055ENSHBUG00000005447-9286.638Haplochromis_burtoni
ENSAOCG00000019167smarca4a10085.704ENSHGLG00000010519SMARCA48985.547Heterocephalus_glaber_female
ENSAOCG00000019167smarca4a10086.121ENSHGLG00100013774SMARCA48985.546Heterocephalus_glaber_male
ENSAOCG00000019167smarca4a10092.049ENSHCOG00000009510smarca4a9191.981Hippocampus_comes
ENSAOCG00000019167smarca4a9784.659ENSIPUG00000016346-8684.649Ictalurus_punctatus
ENSAOCG00000019167smarca4a10090.634ENSIPUG00000006107smarca4a9189.971Ictalurus_punctatus
ENSAOCG00000019167smarca4a10086.119ENSSTOG00000007939SMARCA48985.685Ictidomys_tridecemlineatus
ENSAOCG00000019167smarca4a10084.267ENSJJAG00000012877Smarca48983.367Jaculus_jaculus
ENSAOCG00000019167smarca4a10085.083ENSKMAG00000019518-9082.553Kryptolebias_marmoratus
ENSAOCG00000019167smarca4a10090.599ENSKMAG00000011931smarca4a8990.675Kryptolebias_marmoratus
ENSAOCG00000019167smarca4a10091.894ENSLBEG00000017383smarca4a9291.888Labrus_bergylta
ENSAOCG00000019167smarca4a10077.945ENSLBEG00000020655-8990.814Labrus_bergylta
ENSAOCG00000019167smarca4a5779.447ENSLACG00000015309SMARCA410079.447Latimeria_chalumnae
ENSAOCG00000019167smarca4a10085.170ENSLOCG00000007820smarca4a8984.403Lepisosteus_oculatus
ENSAOCG00000019167smarca4a10086.221ENSLAFG00000001433SMARCA48985.814Loxodonta_africana
ENSAOCG00000019167smarca4a10084.684ENSMFAG00000032146SMARCA48885.892Macaca_fascicularis
ENSAOCG00000019167smarca4a10085.912ENSMMUG00000012042SMARCA48985.892Macaca_mulatta
ENSAOCG00000019167smarca4a10085.892ENSMNEG00000028512SMARCA48985.942Macaca_nemestrina
ENSAOCG00000019167smarca4a10085.912ENSMLEG00000034976SMARCA48985.783Mandrillus_leucophaeus
ENSAOCG00000019167smarca4a10084.983ENSMAMG00000002841-9082.212Mastacembelus_armatus
ENSAOCG00000019167smarca4a10092.793ENSMAMG00000009256smarca4a9092.793Mastacembelus_armatus
ENSAOCG00000019167smarca4a10092.917ENSMZEG00005003889smarca4a9092.735Maylandia_zebra
ENSAOCG00000019167smarca4a10084.116ENSMZEG00005023861-7391.372Maylandia_zebra
ENSAOCG00000019167smarca4a10085.734ENSMAUG00000020731Smarca48985.507Mesocricetus_auratus
ENSAOCG00000019167smarca4a10086.147ENSMICG00000009806SMARCA48985.714Microcebus_murinus
ENSAOCG00000019167smarca4a10085.872ENSMOCG00000022209Smarca48985.576Microtus_ochrogaster
ENSAOCG00000019167smarca4a10085.021ENSMMOG00000008466-8884.117Mola_mola
ENSAOCG00000019167smarca4a10091.262ENSMMOG00000007571smarca4a9291.331Mola_mola
ENSAOCG00000019167smarca4a10084.922ENSMODG00000006287SMARCA49083.615Monodelphis_domestica
ENSAOCG00000019167smarca4a9986.567ENSMALG00000021534-9685.968Monopterus_albus
ENSAOCG00000019167smarca4a10092.926ENSMALG00000003388smarca4a9092.455Monopterus_albus
ENSAOCG00000019167smarca4a10086.119MGP_CAROLIEiJ_G0031879Smarca410082.938Mus_caroli
ENSAOCG00000019167smarca4a10086.119ENSMUSG00000032187Smarca49982.938Mus_musculus
ENSAOCG00000019167smarca4a10086.616MGP_PahariEiJ_G0014745Smarca410083.889Mus_pahari
ENSAOCG00000019167smarca4a10086.119MGP_SPRETEiJ_G0033003Smarca410082.938Mus_spretus
ENSAOCG00000019167smarca4a10086.257ENSMPUG00000005711SMARCA48985.823Mustela_putorius_furo
ENSAOCG00000019167smarca4a10086.602ENSMLUG00000004491-8985.961Myotis_lucifugus
ENSAOCG00000019167smarca4a10086.634ENSNGAG00000021852Smarca48985.922Nannospalax_galili
ENSAOCG00000019167smarca4a9987.260ENSNBRG00000018865-9986.780Neolamprologus_brichardi
ENSAOCG00000019167smarca4a10097.404ENSNBRG00000011457smarca4a9097.404Neolamprologus_brichardi
ENSAOCG00000019167smarca4a9985.566ENSNLEG00000012389SMARCA49185.278Nomascus_leucogenys
ENSAOCG00000019167smarca4a8896.552ENSOPRG00000000885-7596.552Ochotona_princeps
ENSAOCG00000019167smarca4a10086.462ENSODEG00000017127SMARCA48985.884Octodon_degus
ENSAOCG00000019167smarca4a10093.616ENSONIG00000008196smarca4a9092.936Oreochromis_niloticus
ENSAOCG00000019167smarca4a10083.043ENSONIG00000018040-7092.128Oreochromis_niloticus
ENSAOCG00000019167smarca4a10082.026ENSOCUG00000001787SMARCA49081.597Oryctolagus_cuniculus
ENSAOCG00000019167smarca4a9683.878ENSORLG00000003955-9483.929Oryzias_latipes
ENSAOCG00000019167smarca4a10089.178ENSORLG00000015452smarca4a8990.267Oryzias_latipes
ENSAOCG00000019167smarca4a9683.667ENSORLG00020009728-9484.164Oryzias_latipes_hni
ENSAOCG00000019167smarca4a10089.178ENSORLG00020004611smarca4a9990.398Oryzias_latipes_hni
ENSAOCG00000019167smarca4a10089.247ENSORLG00015016560smarca4a9890.354Oryzias_latipes_hsok
ENSAOCG00000019167smarca4a9983.274ENSORLG00015007739-9384.226Oryzias_latipes_hsok
ENSAOCG00000019167smarca4a10089.774ENSOMEG00000007486smarca4a8990.728Oryzias_melastigma
ENSAOCG00000019167smarca4a9681.919ENSOMEG00000016626-7091.696Oryzias_melastigma
ENSAOCG00000019167smarca4a9985.103ENSOGAG00000016148SMARCA410084.265Otolemur_garnettii
ENSAOCG00000019167smarca4a10086.329ENSOARG00000017454SMARCA48786.020Ovis_aries
ENSAOCG00000019167smarca4a10085.912ENSPPAG00000043191SMARCA48985.892Pan_paniscus
ENSAOCG00000019167smarca4a10086.010ENSPPRG00000000064SMARCA48985.576Panthera_pardus
ENSAOCG00000019167smarca4a10085.912ENSPTRG00000010488SMARCA48985.892Pan_troglodytes
ENSAOCG00000019167smarca4a10086.030ENSPANG00000011042SMARCA48886.011Papio_anubis
ENSAOCG00000019167smarca4a10085.247ENSPKIG00000010087-7291.406Paramormyrops_kingsleyae
ENSAOCG00000019167smarca4a10088.985ENSPKIG00000007770SMARCA48888.905Paramormyrops_kingsleyae
ENSAOCG00000019167smarca4a10081.559ENSPSIG00000005547SMARCA48980.910Pelodiscus_sinensis
ENSAOCG00000019167smarca4a10085.941ENSPEMG00000020389Smarca48985.645Peromyscus_maniculatus_bairdii
ENSAOCG00000019167smarca4a10086.386ENSPCIG00000017138SMARCA48986.021Phascolarctos_cinereus
ENSAOCG00000019167smarca4a8390.986ENSPFOG00000012930-9081.271Poecilia_formosa
ENSAOCG00000019167smarca4a10084.718ENSPFOG00000007892smarca4a9088.399Poecilia_formosa
ENSAOCG00000019167smarca4a10089.843ENSPLAG00000014294smarca4a8990.415Poecilia_latipinna
ENSAOCG00000019167smarca4a8391.610ENSPLAG00000018616-8986.022Poecilia_latipinna
ENSAOCG00000019167smarca4a10087.739ENSPMEG00000003725smarca4a9188.467Poecilia_mexicana
ENSAOCG00000019167smarca4a10087.049ENSPMEG00000008929-8987.110Poecilia_mexicana
ENSAOCG00000019167smarca4a10086.119ENSPREG00000014608smarca4a9088.041Poecilia_reticulata
ENSAOCG00000019167smarca4a10084.593ENSPREG00000014823-8884.820Poecilia_reticulata
ENSAOCG00000019167smarca4a10083.660ENSPPYG00000009568SMARCA48983.367Pongo_abelii
ENSAOCG00000019167smarca4a7873.698ENSPCAG00000014054SMARCA46873.057Procavia_capensis
ENSAOCG00000019167smarca4a10086.079ENSPCOG00000023011SMARCA48985.576Propithecus_coquereli
ENSAOCG00000019167smarca4a9180.633ENSPVAG00000007787SMARCA48179.478Pteropus_vampyrus
ENSAOCG00000019167smarca4a10086.629ENSPNYG00000023995-9286.904Pundamilia_nyererei
ENSAOCG00000019167smarca4a10096.323ENSPNYG00000000717smarca4a9192.867Pundamilia_nyererei
ENSAOCG00000019167smarca4a9986.344ENSPNAG00000006636-8886.276Pygocentrus_nattereri
ENSAOCG00000019167smarca4a10089.152ENSPNAG00000024136smarca4a8988.762Pygocentrus_nattereri
ENSAOCG00000019167smarca4a10086.188ENSRNOG00000009271Smarca48985.823Rattus_norvegicus
ENSAOCG00000019167smarca4a10084.684ENSRBIG00000038696SMARCA48885.892Rhinopithecus_bieti
ENSAOCG00000019167smarca4a10085.912ENSRROG00000045509SMARCA48985.892Rhinopithecus_roxellana
ENSAOCG00000019167smarca4a10085.912ENSSBOG00000026896SMARCA48985.892Saimiri_boliviensis_boliviensis
ENSAOCG00000019167smarca4a10086.455ENSSHAG00000001642SMARCA48986.159Sarcophilus_harrisii
ENSAOCG00000019167smarca4a10091.471ENSSFOG00015013823smarca48791.465Scleropages_formosus
ENSAOCG00000019167smarca4a9681.519ENSSFOG00015009921-8291.544Scleropages_formosus
ENSAOCG00000019167smarca4a10091.371ENSSMAG00000003200smarca4a9090.841Scophthalmus_maximus
ENSAOCG00000019167smarca4a10082.659ENSSMAG00000014082-9182.317Scophthalmus_maximus
ENSAOCG00000019167smarca4a10089.557ENSSDUG00000017298smarca4a8989.488Seriola_dumerili
ENSAOCG00000019167smarca4a10085.685ENSSDUG00000005388-7291.088Seriola_dumerili
ENSAOCG00000019167smarca4a10097.086ENSSLDG00000024486smarca4a10097.086Seriola_lalandi_dorsalis
ENSAOCG00000019167smarca4a10085.586ENSSLDG00000023663-7492.128Seriola_lalandi_dorsalis
ENSAOCG00000019167smarca4a6096.894ENSSARG00000013477SMARCA47196.894Sorex_araneus
ENSAOCG00000019167smarca4a10082.794ENSSPUG00000004558SMARCA49282.081Sphenodon_punctatus
ENSAOCG00000019167smarca4a10087.420ENSSPAG00000012533-8987.411Stegastes_partitus
ENSAOCG00000019167smarca4a10098.128ENSSPAG00000004248smarca4a8998.128Stegastes_partitus
ENSAOCG00000019167smarca4a10086.147ENSSSCG00000013629SMARCA48985.714Sus_scrofa
ENSAOCG00000019167smarca4a6083.749ENSTGUG00000015488-9883.612Taeniopygia_guttata
ENSAOCG00000019167smarca4a9981.542ENSTRUG00000001378SMARCA47290.269Takifugu_rubripes
ENSAOCG00000019167smarca4a10090.185ENSTRUG00000004885smarca4a10090.967Takifugu_rubripes
ENSAOCG00000019167smarca4a10082.910ENSTNIG00000004536SMARCA49083.802Tetraodon_nigroviridis
ENSAOCG00000019167smarca4a7889.431ENSTNIG00000004859-9789.431Tetraodon_nigroviridis
ENSAOCG00000019167smarca4a54100.000ENSTBEG00000000707-52100.000Tupaia_belangeri
ENSAOCG00000019167smarca4a10083.300ENSTTRG00000009519SMARCA49082.397Tursiops_truncatus
ENSAOCG00000019167smarca4a10086.257ENSUAMG00000014661SMARCA48985.823Ursus_americanus
ENSAOCG00000019167smarca4a10086.341ENSUMAG00000022005SMARCA48790.587Ursus_maritimus
ENSAOCG00000019167smarca4a10085.302ENSVVUG00000017820SMARCA48785.823Vulpes_vulpes
ENSAOCG00000019167smarca4a10082.269ENSXETG00000009355smarca49981.078Xenopus_tropicalis
ENSAOCG00000019167smarca4a10087.509ENSXCOG00000013494-8887.716Xiphophorus_couchianus
ENSAOCG00000019167smarca4a10085.714ENSXMAG00000007030-8986.619Xiphophorus_maculatus
ENSAOCG00000019167smarca4a10091.507ENSXMAG00000006321smarca4a10091.578Xiphophorus_maculatus

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