EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAOCG00000019295 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Plus strand
Length: 6489 bases
Position: chrNXFZ01000124.1:3815-10303
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000014592	RNA_pol_Rpb1_5	PF04998.17	1.7e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000022973	-	345	-	ENSAOCP00000014592	114 (aa)	-	-

Gene Model

Click here to download ENSAOCG00000019295's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000019295's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAOCG00000019295	-	87	96.970	ENSAOCG00000004721	-	76	96.970
ENSAOCG00000019295	-	95	95.370	ENSAOCG00000011392	-	88	95.370
ENSAOCG00000019295	-	97	96.396	ENSAOCG00000021484	-	89	96.396
ENSAOCG00000019295	-	87	97.980	ENSAOCG00000011482	-	78	97.980

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000019295	-	94	77.778	ENSG00000148606	POLR3A	71	79.130	Homo_sapiens
ENSAOCG00000019295	-	94	83.761	ENSAPOG00000017553	-	70	83.761	Acanthochromis_polyacanthus
ENSAOCG00000019295	-	87	96.970	ENSAPEG00000021935	-	63	96.970	Amphiprion_percula
ENSAOCG00000019295	-	95	87.037	ENSAPEG00000011670	-	73	87.037	Amphiprion_percula
ENSAOCG00000019295	-	97	97.297	ENSAPEG00000020449	-	89	97.297	Amphiprion_percula
ENSAOCG00000019295	-	87	96.970	ENSAPEG00000004431	-	63	96.970	Amphiprion_percula
ENSAOCG00000019295	-	87	96.970	ENSAPEG00000004452	-	63	96.970	Amphiprion_percula
ENSAOCG00000019295	-	100	97.368	ENSAPEG00000019224	-	100	97.368	Amphiprion_percula
ENSAOCG00000019295	-	100	98.246	ENSAPEG00000004479	-	100	98.246	Amphiprion_percula
ENSAOCG00000019295	-	86	94.898	ENSAPEG00000024794	-	75	94.898	Amphiprion_percula
ENSAOCG00000019295	-	87	96.970	ENSAPEG00000001594	-	63	96.970	Amphiprion_percula
ENSAOCG00000019295	-	92	85.217	ENSAPEG00000004262	-	66	85.217	Amphiprion_percula
ENSAOCG00000019295	-	94	77.778	ENSANAG00000028922	POLR3A	70	79.130	Aotus_nancymaae
ENSAOCG00000019295	-	94	77.778	ENSCJAG00000001015	POLR3A	70	79.130	Callithrix_jacchus
ENSAOCG00000019295	-	94	77.778	ENSCAFG00020014711	POLR3A	53	77.778	Canis_lupus_dingo
ENSAOCG00000019295	-	94	77.778	ENSCCAG00000032995	POLR3A	70	79.130	Cebus_capucinus
ENSAOCG00000019295	-	94	77.778	ENSCATG00000035842	POLR3A	71	79.130	Cercocebus_atys
ENSAOCG00000019295	-	94	76.923	ENSCANG00000041071	POLR3A	71	78.261	Colobus_angolensis_palliatus
ENSAOCG00000019295	-	83	75.789	ENSCGRG00001005169	-	69	75.789	Cricetulus_griseus_chok1gshd
ENSAOCG00000019295	-	94	77.778	ENSGGOG00000027729	POLR3A	71	79.130	Gorilla_gorilla
ENSAOCG00000019295	-	92	79.130	ENSIPUG00000001736	-	72	79.130	Ictalurus_punctatus
ENSAOCG00000019295	-	92	78.261	ENSJJAG00000006291	-	66	78.261	Jaculus_jaculus
ENSAOCG00000019295	-	94	77.778	ENSMFAG00000032218	POLR3A	70	79.130	Macaca_fascicularis
ENSAOCG00000019295	-	94	77.778	ENSMMUG00000005514	POLR3A	71	79.130	Macaca_mulatta
ENSAOCG00000019295	-	94	77.778	ENSMLEG00000030014	POLR3A	71	79.130	Mandrillus_leucophaeus
ENSAOCG00000019295	-	94	77.778	ENSMICG00000005937	POLR3A	67	77.778	Microcebus_murinus
ENSAOCG00000019295	-	92	79.130	ENSPPAG00000031986	-	71	79.130	Pan_paniscus
ENSAOCG00000019295	-	94	77.778	ENSPTRG00000002664	POLR3A	71	79.130	Pan_troglodytes
ENSAOCG00000019295	-	94	77.778	ENSPANG00000022508	POLR3A	71	79.130	Papio_anubis
ENSAOCG00000019295	-	94	78.632	ENSPMGG00000015856	-	72	78.632	Periophthalmus_magnuspinnatus
ENSAOCG00000019295	-	94	77.778	ENSPCOG00000028311	POLR3A	62	77.778	Propithecus_coquereli
ENSAOCG00000019295	-	94	77.778	ENSRBIG00000034967	POLR3A	71	79.130	Rhinopithecus_bieti
ENSAOCG00000019295	-	94	77.778	ENSRROG00000025527	POLR3A	71	79.130	Rhinopithecus_roxellana
ENSAOCG00000019295	-	94	77.778	ENSSBOG00000022199	POLR3A	69	79.130	Saimiri_boliviensis_boliviensis