EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAOCG00000019305 (Gene tree)
Gene ID: 111575058
Gene Symbol: -
Alias: -
Full Name: THO complex subunit 4-like
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Minus strand
Length: 3798 bases
Position: chrNXFZ01003021.1:385746-389543
Accession: 111575058
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000029174	RRM_1	PF00076.22	2e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000023019	-	1395	XM_023279965	ENSAOCP00000029174	246 (aa)	XP_023135733	UPI000C305662

Gene Model

Click here to download ENSAOCG00000019305's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000019305's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAOCG00000019305	-	100	52.174	ENSAOCG00000014012	alyref	100	53.261

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000019305	-	100	92.400	ENSAPOG00000000183	-	100	92.000	Acanthochromis_polyacanthus
ENSAOCG00000019305	-	98	49.817	ENSACIG00000006351	alyref	97	51.648	Amphilophus_citrinellus
ENSAOCG00000019305	-	100	65.568	ENSACIG00000020351	-	100	62.637	Amphilophus_citrinellus
ENSAOCG00000019305	-	100	52.174	ENSAPEG00000014603	alyref	100	53.261	Amphiprion_percula
ENSAOCG00000019305	-	100	99.593	ENSAPEG00000013527	-	100	99.593	Amphiprion_percula
ENSAOCG00000019305	-	100	77.344	ENSATEG00000000382	-	100	74.609	Anabas_testudineus
ENSAOCG00000019305	-	100	51.418	ENSATEG00000004307	alyref	100	50.177	Anabas_testudineus
ENSAOCG00000019305	-	52	63.704	ENSAPLG00000014745	-	98	61.481	Anas_platyrhynchos
ENSAOCG00000019305	-	100	70.722	ENSACLG00000010184	-	100	70.722	Astatotilapia_calliptera
ENSAOCG00000019305	-	100	50.903	ENSACLG00000008432	alyref	100	51.625	Astatotilapia_calliptera
ENSAOCG00000019305	-	100	54.064	ENSAMXG00000007359	alyref	100	54.770	Astyanax_mexicanus
ENSAOCG00000019305	-	98	43.629	ENSCING00000013568	-	99	45.211	Ciona_intestinalis
ENSAOCG00000019305	-	98	45.455	ENSCSAVG00000003324	-	99	47.451	Ciona_savignyi
ENSAOCG00000019305	-	100	52.190	ENSCSEG00000017800	alyref	100	52.190	Cynoglossus_semilaevis
ENSAOCG00000019305	-	100	53.309	ENSCVAG00000014869	alyref	100	54.412	Cyprinodon_variegatus
ENSAOCG00000019305	-	100	66.534	ENSCVAG00000007789	-	100	67.729	Cyprinodon_variegatus
ENSAOCG00000019305	-	100	54.930	ENSDARG00000077732	alyref	100	55.282	Danio_rerio
ENSAOCG00000019305	-	96	40.364	FBgn0010774	Ref1	71	43.077	Drosophila_melanogaster
ENSAOCG00000019305	-	100	44.048	ENSEBUG00000006305	alyref	100	42.460	Eptatretus_burgeri
ENSAOCG00000019305	-	98	47.266	ENSEBUG00000008253	alyref	95	46.067	Eptatretus_burgeri
ENSAOCG00000019305	-	100	51.786	ENSELUG00000017178	alyref	100	53.047	Esox_lucius
ENSAOCG00000019305	-	100	59.160	ENSELUG00000008849	-	100	57.634	Esox_lucius
ENSAOCG00000019305	-	61	66.026	ENSFALG00000011923	-	98	63.057	Ficedula_albicollis
ENSAOCG00000019305	-	100	52.768	ENSFHEG00000019426	alyref	100	50.896	Fundulus_heteroclitus
ENSAOCG00000019305	-	100	70.916	ENSFHEG00000004698	-	100	70.120	Fundulus_heteroclitus
ENSAOCG00000019305	-	72	70.157	ENSGMOG00000013122	-	100	70.157	Gadus_morhua
ENSAOCG00000019305	-	100	51.661	ENSGMOG00000009882	alyref	71	57.216	Gadus_morhua
ENSAOCG00000019305	-	100	65.339	ENSGAFG00000007573	-	100	65.339	Gambusia_affinis
ENSAOCG00000019305	-	100	53.114	ENSGAFG00000006014	alyref	100	53.114	Gambusia_affinis
ENSAOCG00000019305	-	100	50.903	ENSHBUG00000020196	alyref	100	51.625	Haplochromis_burtoni
ENSAOCG00000019305	-	100	70.037	ENSHBUG00000001454	-	100	70.412	Haplochromis_burtoni
ENSAOCG00000019305	-	98	67.600	ENSHCOG00000012825	-	95	62.000	Hippocampus_comes
ENSAOCG00000019305	-	100	55.556	ENSIPUG00000009469	alyref	100	54.480	Ictalurus_punctatus
ENSAOCG00000019305	-	79	56.345	ENSSTOG00000016570	-	99	57.214	Ictidomys_tridecemlineatus
ENSAOCG00000019305	-	100	50.725	ENSKMAG00000008912	alyref	100	53.069	Kryptolebias_marmoratus
ENSAOCG00000019305	-	100	72.112	ENSKMAG00000006462	-	100	71.315	Kryptolebias_marmoratus
ENSAOCG00000019305	-	98	55.870	ENSLBEG00000023118	alyref	88	56.452	Labrus_bergylta
ENSAOCG00000019305	-	99	69.531	ENSLBEG00000012930	-	100	66.275	Labrus_bergylta
ENSAOCG00000019305	-	100	69.485	ENSLBEG00000005387	-	100	69.004	Labrus_bergylta
ENSAOCG00000019305	-	84	56.164	ENSLOCG00000013879	alyref	89	57.658	Lepisosteus_oculatus
ENSAOCG00000019305	-	100	51.812	ENSMAMG00000003034	alyref	100	51.087	Mastacembelus_armatus
ENSAOCG00000019305	-	100	72.727	ENSMAMG00000005464	-	100	73.913	Mastacembelus_armatus
ENSAOCG00000019305	-	100	50.903	ENSMZEG00005008639	alyref	100	51.625	Maylandia_zebra
ENSAOCG00000019305	-	100	69.582	ENSMZEG00005012096	-	100	69.582	Maylandia_zebra
ENSAOCG00000019305	-	99	59.036	ENSMMOG00000007032	-	99	58.468	Mola_mola
ENSAOCG00000019305	-	98	48.601	ENSMMOG00000012458	alyref	96	53.731	Mola_mola
ENSAOCG00000019305	-	100	73.077	ENSMALG00000006054	-	100	70.385	Monopterus_albus
ENSAOCG00000019305	-	100	51.273	ENSMLUG00000006521	-	100	48.897	Myotis_lucifugus
ENSAOCG00000019305	-	75	54.255	ENSMLUG00000030671	-	98	43.273	Myotis_lucifugus
ENSAOCG00000019305	-	100	47.222	ENSMLUG00000014372	-	100	48.352	Myotis_lucifugus
ENSAOCG00000019305	-	100	45.683	ENSMLUG00000004098	-	100	48.507	Myotis_lucifugus
ENSAOCG00000019305	-	97	43.911	ENSMLUG00000022178	-	98	43.750	Myotis_lucifugus
ENSAOCG00000019305	-	97	46.097	ENSMLUG00000009247	-	98	44.238	Myotis_lucifugus
ENSAOCG00000019305	-	97	43.571	ENSMLUG00000022467	-	98	41.071	Myotis_lucifugus
ENSAOCG00000019305	-	75	52.332	ENSMLUG00000028605	-	98	42.960	Myotis_lucifugus
ENSAOCG00000019305	-	100	56.098	ENSNGAG00000022014	-	100	57.317	Nannospalax_galili
ENSAOCG00000019305	-	100	71.483	ENSNBRG00000017460	-	100	71.483	Neolamprologus_brichardi
ENSAOCG00000019305	-	100	50.538	ENSNBRG00000001747	alyref	100	51.613	Neolamprologus_brichardi
ENSAOCG00000019305	-	100	72.308	ENSONIG00000003296	-	100	72.308	Oreochromis_niloticus
ENSAOCG00000019305	-	100	49.823	ENSONIG00000019434	alyref	100	50.355	Oreochromis_niloticus
ENSAOCG00000019305	-	98	57.333	ENSORLG00000001620	-	88	55.333	Oryzias_latipes
ENSAOCG00000019305	-	100	68.217	ENSORLG00020015673	-	99	66.926	Oryzias_latipes_hni
ENSAOCG00000019305	-	100	51.095	ENSORLG00020011942	alyref	100	52.920	Oryzias_latipes_hni
ENSAOCG00000019305	-	100	51.471	ENSORLG00015022664	alyref	100	52.574	Oryzias_latipes_hsok
ENSAOCG00000019305	-	100	69.615	ENSORLG00015015143	-	99	66.795	Oryzias_latipes_hsok
ENSAOCG00000019305	-	100	72.112	ENSOMEG00000007158	-	99	71.713	Oryzias_melastigma
ENSAOCG00000019305	-	100	48.454	ENSOMEG00000019176	alyref	100	54.412	Oryzias_melastigma
ENSAOCG00000019305	-	90	53.879	ENSPPAG00000036403	-	68	63.187	Pan_paniscus
ENSAOCG00000019305	-	100	52.297	ENSPKIG00000007070	alyref	100	55.147	Paramormyrops_kingsleyae
ENSAOCG00000019305	-	98	56.809	ENSPKIG00000006233	-	80	57.364	Paramormyrops_kingsleyae
ENSAOCG00000019305	-	67	64.706	ENSPMGG00000012994	-	93	63.415	Periophthalmus_magnuspinnatus
ENSAOCG00000019305	-	98	52.632	ENSPMGG00000016600	alyref	90	53.383	Periophthalmus_magnuspinnatus
ENSAOCG00000019305	-	100	54.400	ENSPEMG00000016628	-	100	56.098	Peromyscus_maniculatus_bairdii
ENSAOCG00000019305	-	100	68.254	ENSPFOG00000017094	-	100	69.444	Poecilia_formosa
ENSAOCG00000019305	-	100	52.364	ENSPFOG00000022825	alyref	99	53.818	Poecilia_formosa
ENSAOCG00000019305	-	100	68.254	ENSPLAG00000014380	-	100	69.444	Poecilia_latipinna
ENSAOCG00000019305	-	100	52.920	ENSPLAG00000006948	alyref	100	53.650	Poecilia_latipinna
ENSAOCG00000019305	-	100	52.364	ENSPMEG00000003547	alyref	100	53.818	Poecilia_mexicana
ENSAOCG00000019305	-	100	68.254	ENSPMEG00000023039	-	100	69.444	Poecilia_mexicana
ENSAOCG00000019305	-	100	68.651	ENSPREG00000003649	-	100	69.444	Poecilia_reticulata
ENSAOCG00000019305	-	100	52.555	ENSPREG00000015795	alyref	100	53.650	Poecilia_reticulata
ENSAOCG00000019305	-	100	50.903	ENSPNYG00000017498	alyref	100	51.625	Pundamilia_nyererei
ENSAOCG00000019305	-	98	69.141	ENSPNYG00000002879	-	98	69.261	Pundamilia_nyererei
ENSAOCG00000019305	-	100	51.228	ENSPNAG00000002531	alyref	100	53.405	Pygocentrus_nattereri
ENSAOCG00000019305	-	75	61.702	ENSSBOG00000030924	-	84	62.234	Saimiri_boliviensis_boliviensis
ENSAOCG00000019305	-	99	48.996	ENSSHAG00000000609	-	100	46.215	Sarcophilus_harrisii
ENSAOCG00000019305	-	99	48.092	ENSSHAG00000012866	-	100	45.946	Sarcophilus_harrisii
ENSAOCG00000019305	-	84	63.158	ENSSFOG00015003923	alyref	73	62.679	Scleropages_formosus
ENSAOCG00000019305	-	81	53.953	ENSSFOG00015003678	alyref	92	57.426	Scleropages_formosus
ENSAOCG00000019305	-	100	53.430	ENSSMAG00000009283	alyref	100	53.791	Scophthalmus_maximus
ENSAOCG00000019305	-	100	70.769	ENSSMAG00000011169	-	100	73.077	Scophthalmus_maximus
ENSAOCG00000019305	-	100	52.174	ENSSDUG00000016158	alyref	100	53.261	Seriola_dumerili
ENSAOCG00000019305	-	100	50.903	ENSSLDG00000017803	alyref	100	49.819	Seriola_lalandi_dorsalis
ENSAOCG00000019305	-	98	90.204	ENSSPAG00000017028	-	95	90.204	Stegastes_partitus
ENSAOCG00000019305	-	100	64.794	ENSTRUG00000003051	-	100	61.977	Takifugu_rubripes
ENSAOCG00000019305	-	100	67.194	ENSTNIG00000014136	-	100	62.097	Tetraodon_nigroviridis
ENSAOCG00000019305	-	100	50.730	ENSTNIG00000011595	alyref	100	53.053	Tetraodon_nigroviridis
ENSAOCG00000019305	-	75	60.847	ENSVVUG00000000272	-	90	60.000	Vulpes_vulpes
ENSAOCG00000019305	-	98	52.809	ENSXCOG00000018047	alyref	98	52.416	Xiphophorus_couchianus
ENSAOCG00000019305	-	98	52.809	ENSXMAG00000012218	alyref	98	52.416	Xiphophorus_maculatus
ENSAOCG00000019305	-	100	67.729	ENSXMAG00000018086	-	100	67.729	Xiphophorus_maculatus